RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ADM2Q7Z4H4 148 aa6.34□□□□□ -1.4
CLSTN1-203ENST00000435891 NUPR2A6NF83 97 aa6.33□□□□□ -1.4
CLSTN1-203ENST00000435891 SPANXA2-OT1Q8N9U9 137 aa6.33□□□□□ -1.4
CLSTN1-203ENST00000435891 SPACA4Q8TDM5 124 aa6.33□□□□□ -1.4
CLSTN1-203ENST00000435891 DNHD1Q96M86 4753 aa6.33□□□□□ -1.4
CLSTN1-203ENST00000435891 IGLV9-49A0A0B4J1Y8 123 aa6.32□□□□□ -1.4
CLSTN1-203ENST00000435891 LINC01554Q52M75 96 aa6.32□□□□□ -1.4
CLSTN1-203ENST00000435891 A0A087WTM6 91 aa6.31□□□□□ -1.4
CLSTN1-203ENST00000435891 A8MWP4 228 aa6.3□□□□□ -1.4
CLSTN1-203ENST00000435891 ANAPC11Q9NYG5 84 aa6.3□□□□□ -1.4
CLSTN1-203ENST00000435891 DNAH6Q9C0G6 4158 aa6.28□□□□□ -1.4
CLSTN1-203ENST00000435891 H3BPC8 53 aa6.27□□□□□ -1.41
CLSTN1-203ENST00000435891 Q96NJ1 140 aa6.27□□□□□ -1.41
CLSTN1-203ENST00000435891 PSORS1C2Q9UIG4 136 aa6.27□□□□□ -1.41
CLSTN1-203ENST00000435891 RTL8CO15255 209 aa6.27□□□□□ -1.41
CLSTN1-203ENST00000435891 MMP24-AS1A0A0U1RRL7 71 aa6.26□□□□□ -1.41
CLSTN1-203ENST00000435891 LINC01558Q9Y6Z2 57 aa6.26□□□□□ -1.41
CLSTN1-203ENST00000435891 PRR26Q8N8Z3 221 aa6.25□□□□□ -1.41
CLSTN1-203ENST00000435891 RETNLBQ9BQ08 111 aa6.24□□□□□ -1.41
CLSTN1-203ENST00000435891 DNAH11Q96DT5 4516 aa6.24□□□□□ -1.41
CLSTN1-203ENST00000435891 IGLV7-46A0A075B6I9 117 aa6.24□□□□□ -1.41
CLSTN1-203ENST00000435891 WWC2-AS2Q96NR7 200 aa6.24□□□□□ -1.41
CLSTN1-203ENST00000435891 IGLV5-52A0A0A0MRZ9 124 aa6.24□□□□□ -1.41
CLSTN1-203ENST00000435891 LINC00483Q53H64 154 aa6.24□□□□□ -1.41
CLSTN1-203ENST00000435891 Q6ZR54 194 aa6.23□□□□□ -1.41
CLSTN1-203ENST00000435891 DNAH5Q8TE73 4624 aa6.23□□□□□ -1.41
CLSTN1-203ENST00000435891 ALMS1Q8TCU4 4167 aa6.22□□□□□ -1.41
CLSTN1-203ENST00000435891 PLAC8Q9NZF1 115 aa6.21□□□□□ -1.42
CLSTN1-203ENST00000435891 ZNF861PO60384 105 aa6.19□□□□□ -1.42
CLSTN1-203ENST00000435891 A0A087X002 238 aa6.19□□□□□ -1.42
CLSTN1-203ENST00000435891 NOTCH2NLQ7Z3S9 236 aa6.19□□□□□ -1.42
CLSTN1-203ENST00000435891 HRES1P13985 223 aa6.18□□□□□ -1.42
CLSTN1-203ENST00000435891 IGHV6-1A0A0B4J1U7 121 aa6.18□□□□□ -1.42
CLSTN1-203ENST00000435891 ASB16-AS1Q495Z4 193 aa6.18□□□□□ -1.42
CLSTN1-203ENST00000435891 C8orf17Q9NRJ1 99 aa6.17□□□□□ -1.42
CLSTN1-203ENST00000435891 LRP1BQ9NZR2 4599 aa6.17□□□□□ -1.42
CLSTN1-203ENST00000435891 CDK2AP2O75956 126 aa6.17□□□□□ -1.42
CLSTN1-203ENST00000435891 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
CLSTN1-203ENST00000435891 ZNF706Q9Y5V0 76 aaPredicted RBP6.16□□□□□ -1.42
CLSTN1-203ENST00000435891 C1orf134Q5TEV5 83 aa6.15□□□□□ -1.42
CLSTN1-203ENST00000435891 A0A1B0GVX0 72 aa6.15□□□□□ -1.43
CLSTN1-203ENST00000435891 HYDINQ4G0P3 5121 aa6.14□□□□□ -1.43
CLSTN1-203ENST00000435891 A0A1B0GU69 56 aa6.14□□□□□ -1.43
CLSTN1-203ENST00000435891 LY6G6CO95867 125 aa6.14□□□□□ -1.43
CLSTN1-203ENST00000435891 KRTAP10-2P60368 255 aa6.13□□□□□ -1.43
CLSTN1-203ENST00000435891 IGLV7-43P04211 117 aa6.13□□□□□ -1.43
CLSTN1-203ENST00000435891 SPINK6Q6UWN8 80 aa6.13□□□□□ -1.43
CLSTN1-203ENST00000435891 PKD1P98161 4303 aa6.11□□□□□ -1.43
CLSTN1-203ENST00000435891 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
CLSTN1-203ENST00000435891 CIRBP-AS1Q8TBR5 109 aa6.11□□□□□ -1.43
CLSTN1-203ENST00000435891 FAT2Q9NYQ8 4349 aa6.11□□□□□ -1.43
CLSTN1-203ENST00000435891 MRPL34Q9BQ48 92 aaKnown RBP6.09□□□□□ -1.43
CLSTN1-203ENST00000435891 TP53AIP1Q9HCN2 124 aa6.09□□□□□ -1.43
CLSTN1-203ENST00000435891 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
CLSTN1-203ENST00000435891 FLG2Q5D862 2391 aaPredicted RBP6.07□□□□□ -1.44
CLSTN1-203ENST00000435891 Q5W150 140 aa6.07□□□□□ -1.44
CLSTN1-203ENST00000435891 ACYP2P14621 99 aa6.06□□□□□ -1.44
CLSTN1-203ENST00000435891 VPS13BQ7Z7G8 4022 aa6.06□□□□□ -1.44
CLSTN1-203ENST00000435891 UQCR11O14957 56 aa6.04□□□□□ -1.44
CLSTN1-203ENST00000435891 KRTAP10-1P60331 282 aa6.03□□□□□ -1.44
CLSTN1-203ENST00000435891 KRTAP13-2Q52LG2 175 aa6.03□□□□□ -1.44
CLSTN1-203ENST00000435891 KRTAP13-3Q3SY46 172 aa6.01□□□□□ -1.45
CLSTN1-203ENST00000435891 PKHD1P08F94 4074 aa6.01□□□□□ -1.45
CLSTN1-203ENST00000435891 SSBP3-AS1Q7Z2R9 100 aa6□□□□□ -1.45
CLSTN1-203ENST00000435891 Q6ZSA8 131 aa5.99□□□□□ -1.45
CLSTN1-203ENST00000435891 SPINK1P00995 79 aa5.97□□□□□ -1.45
CLSTN1-203ENST00000435891 KRTAP1-4P0C5Y4 121 aa5.96□□□□□ -1.46
CLSTN1-203ENST00000435891 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
CLSTN1-203ENST00000435891 SACSQ9NZJ4 4579 aa5.94□□□□□ -1.46
CLSTN1-203ENST00000435891 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
CLSTN1-203ENST00000435891 KRTAP16-1A8MUX0 517 aa5.9□□□□□ -1.46
CLSTN1-203ENST00000435891 FAT1Q14517 4588 aa5.89□□□□□ -1.47
CLSTN1-203ENST00000435891 DYNC1H1Q14204 4646 aaKnown RBP5.88□□□□□ -1.47
CLSTN1-203ENST00000435891 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
CLSTN1-203ENST00000435891 IGKV2-30P06310 120 aa5.87□□□□□ -1.47
CLSTN1-203ENST00000435891 ROMO1P60602 79 aa5.87□□□□□ -1.47
CLSTN1-203ENST00000435891 DMBT1Q9UGM3 2413 aaPredicted RBP5.87□□□□□ -1.47
CLSTN1-203ENST00000435891 FAM229AH3BQW9 127 aa5.87□□□□□ -1.47
CLSTN1-203ENST00000435891 TYMSOSQ8TAI1 123 aa5.84□□□□□ -1.47
CLSTN1-203ENST00000435891 DMAC1Q96GE9 116 aa5.84□□□□□ -1.48
CLSTN1-203ENST00000435891 SMR3BP02814 79 aaPredicted RBP5.81□□□□□ -1.48
CLSTN1-203ENST00000435891 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
CLSTN1-203ENST00000435891 APOBP04114 4563 aaKnown RBP5.8□□□□□ -1.48
CLSTN1-203ENST00000435891 SPINT4Q6UDR6 99 aa5.79□□□□□ -1.48
CLSTN1-203ENST00000435891 LINC00304Q8N9R0 145 aa5.75□□□□□ -1.49
CLSTN1-203ENST00000435891 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
CLSTN1-203ENST00000435891 A8MUU9 505 aa5.74□□□□□ -1.49
CLSTN1-203ENST00000435891 Q8N1X5 172 aa5.73□□□□□ -1.49
CLSTN1-203ENST00000435891 K7ERS5 55 aa5.73□□□□□ -1.49
CLSTN1-203ENST00000435891 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
CLSTN1-203ENST00000435891 C9orf92A6NGG3 77 aa5.7□□□□□ -1.5
CLSTN1-203ENST00000435891 KRTAP10-4P60372 401 aaPredicted RBP5.69□□□□□ -1.5
CLSTN1-203ENST00000435891 RYR2Q92736 4967 aa5.69□□□□□ -1.5
CLSTN1-203ENST00000435891 A0A1B0GVY2 172 aa5.68□□□□□ -1.5
CLSTN1-203ENST00000435891 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
CLSTN1-203ENST00000435891 P0C880 135 aa5.67□□□□□ -1.5
CLSTN1-203ENST00000435891 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
CLSTN1-203ENST00000435891 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
CLSTN1-203ENST00000435891 A0A1B0GU33 70 aa5.64□□□□□ -1.51
CLSTN1-203ENST00000435891 KRTAP21-3Q3LHN1 58 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms