RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 FCGBPQ9Y6R7 5405 aaPredicted RBP5.89□□□□□ -1.47
CHRNA1-207ENST00000435083 MT2AP02795 61 aa5.89□□□□□ -1.47
CHRNA1-207ENST00000435083 Q6ZQY7 126 aa5.89□□□□□ -1.47
CHRNA1-207ENST00000435083 OCIAD2Q56VL3 154 aa5.88□□□□□ -1.47
CHRNA1-207ENST00000435083 ORMDL1Q9P0S3 153 aa5.88□□□□□ -1.47
CHRNA1-207ENST00000435083 MTURNQ8N3F0 131 aa5.87□□□□□ -1.47
CHRNA1-207ENST00000435083 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.86□□□□□ -1.47
CHRNA1-207ENST00000435083 TEN1Q86WV5 123 aa5.86□□□□□ -1.47
CHRNA1-207ENST00000435083 TMEM256-PLSCR3K7ERE1 68 aa5.85□□□□□ -1.47
CHRNA1-207ENST00000435083 K7ERU9 68 aa5.85□□□□□ -1.47
CHRNA1-207ENST00000435083 BAALC-AS2P0C853 105 aa5.85□□□□□ -1.47
CHRNA1-207ENST00000435083 C20orf166-AS1Q96NR2 134 aa5.85□□□□□ -1.47
CHRNA1-207ENST00000435083 FAM236DA0A1B0GTK5 79 aa5.84□□□□□ -1.47
CHRNA1-207ENST00000435083 A8MUU9 505 aa5.84□□□□□ -1.47
CHRNA1-207ENST00000435083 FAM236CP0DP71 79 aa5.84□□□□□ -1.47
CHRNA1-207ENST00000435083 ETDBQ3ZM63 59 aa5.84□□□□□ -1.47
CHRNA1-207ENST00000435083 J3QR89 54 aa5.84□□□□□ -1.48
CHRNA1-207ENST00000435083 MT1FP04733 61 aa5.84□□□□□ -1.48
CHRNA1-207ENST00000435083 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
CHRNA1-207ENST00000435083 PPDPFLQ8WWR9 84 aa5.83□□□□□ -1.48
CHRNA1-207ENST00000435083 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
CHRNA1-207ENST00000435083 JMJD7-PLA2G4BH0Y9G9 81 aa5.8□□□□□ -1.48
CHRNA1-207ENST00000435083 SS18L2Q9UHA2 77 aa5.8□□□□□ -1.48
CHRNA1-207ENST00000435083 PCP4P48539 62 aa5.79□□□□□ -1.48
CHRNA1-207ENST00000435083 DSCR10P59022 87 aa5.78□□□□□ -1.48
CHRNA1-207ENST00000435083 VPS25Q9BRG1 176 aa5.77□□□□□ -1.49
CHRNA1-207ENST00000435083 KRTAP16-1A8MUX0 517 aa5.76□□□□□ -1.49
CHRNA1-207ENST00000435083 RBM12B-AS1Q9P1G2 102 aa5.76□□□□□ -1.49
CHRNA1-207ENST00000435083 LINC00846Q9NV44 126 aa5.76□□□□□ -1.49
CHRNA1-207ENST00000435083 PDE6GP18545 87 aa5.75□□□□□ -1.49
CHRNA1-207ENST00000435083 RBM3P98179 157 aaKnown RBP5.75□□□□□ -1.49
CHRNA1-207ENST00000435083 A0A087WSZ3 146 aa5.74□□□□□ -1.49
CHRNA1-207ENST00000435083 NDUFV3P56181 108 aaKnown RBP5.74□□□□□ -1.49
CHRNA1-207ENST00000435083 FAM240AA0A1B0GVK7 77 aa5.73□□□□□ -1.49
CHRNA1-207ENST00000435083 HRES1P13985 223 aa5.73□□□□□ -1.49
CHRNA1-207ENST00000435083 DSCR8Q96T75 97 aa5.73□□□□□ -1.49
CHRNA1-207ENST00000435083 ACYP1P07311 99 aa5.72□□□□□ -1.49
CHRNA1-207ENST00000435083 MPLKIPQ8TAP9 179 aa5.72□□□□□ -1.49
CHRNA1-207ENST00000435083 SIGMAR1Q99720 223 aa5.72□□□□□ -1.49
CHRNA1-207ENST00000435083 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
CHRNA1-207ENST00000435083 LOC110117498A0A087WWA1 95 aa5.72□□□□□ -1.49
CHRNA1-207ENST00000435083 LINC00313P59037 77 aa5.72□□□□□ -1.49
CHRNA1-207ENST00000435083 C14orf132Q9NPU4 83 aa5.72□□□□□ -1.49
CHRNA1-207ENST00000435083 KRTAP19-6Q3LI70 58 aa5.7□□□□□ -1.5
CHRNA1-207ENST00000435083 TRBV7-4A0A0J9YYF1 115 aa5.69□□□□□ -1.5
CHRNA1-207ENST00000435083 A0A1B0GV72 72 aa5.69□□□□□ -1.5
CHRNA1-207ENST00000435083 CCKP06307 115 aa5.69□□□□□ -1.5
CHRNA1-207ENST00000435083 NOTCH2NLQ7Z3S9 236 aa5.68□□□□□ -1.5
CHRNA1-207ENST00000435083 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
CHRNA1-207ENST00000435083 Q6ZQT0 140 aa5.67□□□□□ -1.5
CHRNA1-207ENST00000435083 IGKV4-1P06312 121 aa5.67□□□□□ -1.5
CHRNA1-207ENST00000435083 A0A1B0GW54 56 aa5.66□□□□□ -1.5
CHRNA1-207ENST00000435083 A0A1W2PNM2 257 aa5.63□□□□□ -1.51
CHRNA1-207ENST00000435083 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
CHRNA1-207ENST00000435083 DEFB116Q30KQ4 102 aa5.62□□□□□ -1.51
CHRNA1-207ENST00000435083 UBL5Q9BZL1 73 aa5.62□□□□□ -1.51
CHRNA1-207ENST00000435083 IGHV6-1A0A0B4J1U7 121 aa5.6□□□□□ -1.51
CHRNA1-207ENST00000435083 LINC00643Q86TS7 51 aa5.6□□□□□ -1.51
CHRNA1-207ENST00000435083 A8MWP4 228 aa5.58□□□□□ -1.52
CHRNA1-207ENST00000435083 SCGB1A1P11684 91 aa5.58□□□□□ -1.52
CHRNA1-207ENST00000435083 ATP5EP2Q5VTU8 51 aa5.58□□□□□ -1.52
CHRNA1-207ENST00000435083 Q8N9P0 234 aaPredicted RBP5.57□□□□□ -1.52
CHRNA1-207ENST00000435083 SPINK7P58062 85 aa5.56□□□□□ -1.52
CHRNA1-207ENST00000435083 LINC00472Q9H8W2 130 aa5.56□□□□□ -1.52
CHRNA1-207ENST00000435083 MT-ATP8P03928 68 aa5.55□□□□□ -1.52
CHRNA1-207ENST00000435083 NREPQ16612 68 aa5.55□□□□□ -1.52
CHRNA1-207ENST00000435083 Q6ZVQ6 151 aa5.55□□□□□ -1.52
CHRNA1-207ENST00000435083 ZCCHC13Q8WW36 166 aaKnown RBP5.55□□□□□ -1.52
CHRNA1-207ENST00000435083 C8orf87E5RJ46 101 aa5.54□□□□□ -1.52
CHRNA1-207ENST00000435083 IMUPQ9GZP8 106 aa5.53□□□□□ -1.52
CHRNA1-207ENST00000435083 A0A1B0GVX0 72 aa5.52□□□□□ -1.53
CHRNA1-207ENST00000435083 CXCL6P80162 114 aa5.52□□□□□ -1.53
CHRNA1-207ENST00000435083 WFDC13Q8IUB5 93 aa5.5□□□□□ -1.53
CHRNA1-207ENST00000435083 BPY2O14599 106 aa5.49□□□□□ -1.53
CHRNA1-207ENST00000435083 IGKV3D-7A0A0C4DH55 119 aa5.47□□□□□ -1.53
CHRNA1-207ENST00000435083 J3KT08 172 aa5.46□□□□□ -1.53
CHRNA1-207ENST00000435083 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.53
CHRNA1-207ENST00000435083 HIST1H4AP62805 103 aaKnown RBP5.45□□□□□ -1.54
CHRNA1-207ENST00000435083 NDUFB1O75438 58 aa5.41□□□□□ -1.54
CHRNA1-207ENST00000435083 ANAPC13Q9BS18 74 aa5.41□□□□□ -1.54
CHRNA1-207ENST00000435083 H1FX-AS1Q4G0G2 97 aa5.4□□□□□ -1.55
CHRNA1-207ENST00000435083 FAM236AA0A1B0GUQ0 79 aa5.39□□□□□ -1.55
CHRNA1-207ENST00000435083 FAM236BA0A1B0GV22 79 aa5.39□□□□□ -1.55
CHRNA1-207ENST00000435083 C8orf17Q9NRJ1 99 aa5.38□□□□□ -1.55
CHRNA1-207ENST00000435083 A0A087WVE0 104 aa5.38□□□□□ -1.55
CHRNA1-207ENST00000435083 K7EQZ3 153 aa5.37□□□□□ -1.55
CHRNA1-207ENST00000435083 ATOX1O00244 68 aa5.37□□□□□ -1.55
CHRNA1-207ENST00000435083 NEBP20929 6669 aa5.37□□□□□ -1.55
CHRNA1-207ENST00000435083 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
CHRNA1-207ENST00000435083 PRR15Q8IV56 129 aa5.37□□□□□ -1.55
CHRNA1-207ENST00000435083 Q8N9L7 120 aa5.36□□□□□ -1.55
CHRNA1-207ENST00000435083 A6NN06 94 aa5.35□□□□□ -1.55
CHRNA1-207ENST00000435083 SMIM20Q8N5G0 67 aa5.34□□□□□ -1.55
CHRNA1-207ENST00000435083 HCG22E2RYF7 251 aa5.33□□□□□ -1.56
CHRNA1-207ENST00000435083 MUC12Q9UKN1 5478 aa5.32□□□□□ -1.56
CHRNA1-207ENST00000435083 CASC2Q6XLA1 102 aa5.29□□□□□ -1.56
CHRNA1-207ENST00000435083 MMP24-AS1A0A0U1RRL7 71 aa5.29□□□□□ -1.56
CHRNA1-207ENST00000435083 hDV103S1A0JD37 113 aa5.29□□□□□ -1.56
CHRNA1-207ENST00000435083 MRPL34Q9BQ48 92 aaKnown RBP5.28□□□□□ -1.56
CHRNA1-207ENST00000435083 CCDC179H3BU77 68 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms