RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 CXCL6P80162 114 aa7.39□□□□□ -1.23
CDC42EP1-204ENST00000434728 DEFB105AQ8NG35 78 aa7.39□□□□□ -1.23
CDC42EP1-204ENST00000434728 LIMD2Q9BT23 127 aa7.39□□□□□ -1.23
CDC42EP1-204ENST00000434728 ST20-AS1Q8NBB2 130 aa7.38□□□□□ -1.23
CDC42EP1-204ENST00000434728 HIST1H4AP62805 103 aaKnown RBP7.37□□□□□ -1.23
CDC42EP1-204ENST00000434728 Q6ZVQ6 151 aa7.37□□□□□ -1.23
CDC42EP1-204ENST00000434728 ANAPC13Q9BS18 74 aa7.37□□□□□ -1.23
CDC42EP1-204ENST00000434728 PCOTHQ58A44 107 aa7.36□□□□□ -1.23
CDC42EP1-204ENST00000434728 HRCT1Q6UXD1 115 aa7.36□□□□□ -1.23
CDC42EP1-204ENST00000434728 SMIM29Q86T20 159 aa7.36□□□□□ -1.23
CDC42EP1-204ENST00000434728 C9orf92A6NGG3 77 aa7.35□□□□□ -1.23
CDC42EP1-204ENST00000434728 IGKV3D-7A0A0C4DH55 119 aa7.34□□□□□ -1.23
CDC42EP1-204ENST00000434728 FAM236AA0A1B0GUQ0 79 aa7.34□□□□□ -1.23
CDC42EP1-204ENST00000434728 FAM236BA0A1B0GV22 79 aa7.34□□□□□ -1.23
CDC42EP1-204ENST00000434728 ATOX1O00244 68 aa7.33□□□□□ -1.24
CDC42EP1-204ENST00000434728 LCE2CQ5TA81 110 aa7.32□□□□□ -1.24
CDC42EP1-204ENST00000434728 A0A1W2PNM2 257 aa7.31□□□□□ -1.24
CDC42EP1-204ENST00000434728 M0R2T5 61 aa7.31□□□□□ -1.24
CDC42EP1-204ENST00000434728 MT1HP80294 61 aa7.3□□□□□ -1.24
CDC42EP1-204ENST00000434728 NREPQ16612 68 aa7.3□□□□□ -1.24
CDC42EP1-204ENST00000434728 IGFL1Q6UW32 110 aa7.27□□□□□ -1.25
CDC42EP1-204ENST00000434728 COX6B2Q6YFQ2 88 aa7.27□□□□□ -1.25
CDC42EP1-204ENST00000434728 KRTAP19-2Q3LHN2 52 aa7.25□□□□□ -1.25
CDC42EP1-204ENST00000434728 SMIM20Q8N5G0 67 aa7.25□□□□□ -1.25
CDC42EP1-204ENST00000434728 BPY2O14599 106 aa7.24□□□□□ -1.25
CDC42EP1-204ENST00000434728 UQCRQO14949 82 aa7.23□□□□□ -1.25
CDC42EP1-204ENST00000434728 A0A087WVE0 104 aa7.22□□□□□ -1.25
CDC42EP1-204ENST00000434728 CD164Q04900 197 aa7.22□□□□□ -1.25
CDC42EP1-204ENST00000434728 COX7CP15954 63 aa7.21□□□□□ -1.26
CDC42EP1-204ENST00000434728 KRTAP10-6P60371 365 aaPredicted RBP7.21□□□□□ -1.26
CDC42EP1-204ENST00000434728 SERP2Q8N6R1 65 aa7.21□□□□□ -1.26
CDC42EP1-204ENST00000434728 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
CDC42EP1-204ENST00000434728 IGKV4-1P06312 121 aa7.19□□□□□ -1.26
CDC42EP1-204ENST00000434728 TRAV7A0A075B6U4 112 aa7.16□□□□□ -1.26
CDC42EP1-204ENST00000434728 CCDC179H3BU77 68 aa7.16□□□□□ -1.26
CDC42EP1-204ENST00000434728 RPL37P61927 97 aaKnown RBP7.16□□□□□ -1.26
CDC42EP1-204ENST00000434728 C1orf195Q5TG92 126 aa7.16□□□□□ -1.26
CDC42EP1-204ENST00000434728 A0A087WSZ3 146 aa7.15□□□□□ -1.26
CDC42EP1-204ENST00000434728 J3KT08 172 aa7.15□□□□□ -1.26
CDC42EP1-204ENST00000434728 SS18L2Q9UHA2 77 aa7.15□□□□□ -1.26
CDC42EP1-204ENST00000434728 Q5XG85 94 aa7.14□□□□□ -1.27
CDC42EP1-204ENST00000434728 DSCR10P59022 87 aa7.13□□□□□ -1.27
CDC42EP1-204ENST00000434728 A0A0G2JQZ4 141 aa7.11□□□□□ -1.27
CDC42EP1-204ENST00000434728 LINC00472Q9H8W2 130 aa7.11□□□□□ -1.27
CDC42EP1-204ENST00000434728 Q8N9L7 120 aa7.08□□□□□ -1.28
CDC42EP1-204ENST00000434728 A8MWP4 228 aa7.07□□□□□ -1.28
CDC42EP1-204ENST00000434728 K7EQZ3 153 aa7.07□□□□□ -1.28
CDC42EP1-204ENST00000434728 HCG22E2RYF7 251 aa7.06□□□□□ -1.28
CDC42EP1-204ENST00000434728 ATP11AUNQ6ZP68 121 aa7.06□□□□□ -1.28
CDC42EP1-204ENST00000434728 FLGP20930 4061 aaPredicted RBP7.06□□□□□ -1.28
CDC42EP1-204ENST00000434728 PRR15Q8IV56 129 aa7.05□□□□□ -1.28
CDC42EP1-204ENST00000434728 OCR1Q9BZK8 76 aa7.05□□□□□ -1.28
CDC42EP1-204ENST00000434728 NDUFB1O75438 58 aa7.03□□□□□ -1.28
CDC42EP1-204ENST00000434728 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
CDC42EP1-204ENST00000434728 NDUFC1O43677 76 aa7.01□□□□□ -1.29
CDC42EP1-204ENST00000434728 TMEM258P61165 79 aa7.01□□□□□ -1.29
CDC42EP1-204ENST00000434728 Q96NJ1 140 aa7.01□□□□□ -1.29
CDC42EP1-204ENST00000434728 C20orf197Q8N268 126 aa6.98□□□□□ -1.29
CDC42EP1-204ENST00000434728 Q75L30 129 aa6.97□□□□□ -1.29
CDC42EP1-204ENST00000434728 DEFB116Q30KQ4 102 aa6.96□□□□□ -1.3
CDC42EP1-204ENST00000434728 CASC2Q6XLA1 102 aa6.96□□□□□ -1.3
CDC42EP1-204ENST00000434728 TMEM254Q8TBM7 123 aa6.96□□□□□ -1.3
CDC42EP1-204ENST00000434728 MMP24-AS1A0A0U1RRL7 71 aa6.95□□□□□ -1.3
CDC42EP1-204ENST00000434728 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
CDC42EP1-204ENST00000434728 C5orf47Q569G3 176 aa6.95□□□□□ -1.3
CDC42EP1-204ENST00000434728 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
CDC42EP1-204ENST00000434728 H3BPC8 53 aa6.93□□□□□ -1.3
CDC42EP1-204ENST00000434728 ATP5EP56381 51 aaPredicted RBP6.93□□□□□ -1.3
CDC42EP1-204ENST00000434728 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
CDC42EP1-204ENST00000434728 WFDC13Q8IUB5 93 aa6.92□□□□□ -1.3
CDC42EP1-204ENST00000434728 hDV103S1A0JD37 113 aa6.91□□□□□ -1.3
CDC42EP1-204ENST00000434728 C8orf87E5RJ46 101 aa6.91□□□□□ -1.3
CDC42EP1-204ENST00000434728 H7BZZ5 65 aa6.91□□□□□ -1.3
CDC42EP1-204ENST00000434728 CYSTM1Q9H1C7 97 aa6.91□□□□□ -1.3
CDC42EP1-204ENST00000434728 TP53AIP1Q9HCN2 124 aa6.91□□□□□ -1.3
CDC42EP1-204ENST00000434728 C8orf17Q9NRJ1 99 aa6.91□□□□□ -1.3
CDC42EP1-204ENST00000434728 MP68P56378 58 aa6.88□□□□□ -1.31
CDC42EP1-204ENST00000434728 ZCCHC13Q8WW36 166 aaKnown RBP6.88□□□□□ -1.31
CDC42EP1-204ENST00000434728 RPS28P62857 69 aaKnown RBP6.87□□□□□ -1.31
CDC42EP1-204ENST00000434728 FAM236DA0A1B0GTK5 79 aa6.86□□□□□ -1.31
CDC42EP1-204ENST00000434728 FAM236CP0DP71 79 aa6.86□□□□□ -1.31
CDC42EP1-204ENST00000434728 SNURFQ9Y675 71 aa6.86□□□□□ -1.31
CDC42EP1-204ENST00000434728 USH2AO75445 5202 aa6.85□□□□□ -1.31
CDC42EP1-204ENST00000434728 IGHV6-1A0A0B4J1U7 121 aa6.85□□□□□ -1.31
CDC42EP1-204ENST00000434728 MRPL34Q9BQ48 92 aaKnown RBP6.85□□□□□ -1.31
CDC42EP1-204ENST00000434728 SSPOA2VEC9 5147 aa6.83□□□□□ -1.32
CDC42EP1-204ENST00000434728 C20orf166-AS1Q96NR2 134 aa6.83□□□□□ -1.32
CDC42EP1-204ENST00000434728 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
CDC42EP1-204ENST00000434728 TRAV22A0A0B4J277 110 aa6.82□□□□□ -1.32
CDC42EP1-204ENST00000434728 A8MUU9 505 aa6.81□□□□□ -1.32
CDC42EP1-204ENST00000434728 H0Y9P7 68 aa6.81□□□□□ -1.32
CDC42EP1-204ENST00000434728 SERP1Q9Y6X1 66 aa6.78□□□□□ -1.32
CDC42EP1-204ENST00000434728 LINC00313P59037 77 aa6.77□□□□□ -1.33
CDC42EP1-204ENST00000434728 RBM12B-AS1Q9P1G2 102 aa6.77□□□□□ -1.33
CDC42EP1-204ENST00000434728 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
CDC42EP1-204ENST00000434728 LINC00208Q96KT6 92 aa6.76□□□□□ -1.33
CDC42EP1-204ENST00000434728 SPANXA2-OT1Q8N9U9 137 aa6.75□□□□□ -1.33
CDC42EP1-204ENST00000434728 MT2AP02795 61 aa6.74□□□□□ -1.33
CDC42EP1-204ENST00000434728 NOTCH2NLQ7Z3S9 236 aa6.74□□□□□ -1.33
CDC42EP1-204ENST00000434728 Q8N9P0 234 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms