RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 A0A1B0GW54 56 aa10.87□□□□□ -0.67
LMBR1-210ENST00000434503 CCKP06307 115 aa10.86□□□□□ -0.67
LMBR1-210ENST00000434503 PRO0461Q9UI25 63 aa10.86□□□□□ -0.67
LMBR1-210ENST00000434503 A0A1B0GV72 72 aa10.83□□□□□ -0.68
LMBR1-210ENST00000434503 SMCPP49901 116 aaPredicted RBP10.83□□□□□ -0.68
LMBR1-210ENST00000434503 Q6ZQT0 140 aa10.83□□□□□ -0.68
LMBR1-210ENST00000434503 A0A087WSZ3 146 aa10.82□□□□□ -0.68
LMBR1-210ENST00000434503 F8W1H4 67 aa10.81□□□□□ -0.68
LMBR1-210ENST00000434503 MTURNQ8N3F0 131 aa10.81□□□□□ -0.68
LMBR1-210ENST00000434503 Q75L30 129 aa10.8□□□□□ -0.68
LMBR1-210ENST00000434503 ATP11AUNQ6ZP68 121 aa10.79□□□□□ -0.68
LMBR1-210ENST00000434503 C14orf132Q9NPU4 83 aa10.78□□□□□ -0.68
LMBR1-210ENST00000434503 Q96NJ1 140 aa10.77□□□□□ -0.69
LMBR1-210ENST00000434503 VPS25Q9BRG1 176 aa10.74□□□□□ -0.69
LMBR1-210ENST00000434503 LINC00472Q9H8W2 130 aa10.71□□□□□ -0.69
LMBR1-210ENST00000434503 KRTAP9-7A8MTY7 169 aa10.7□□□□□ -0.7
LMBR1-210ENST00000434503 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.7□□□□□ -0.7
LMBR1-210ENST00000434503 C20orf166-AS1Q96NR2 134 aa10.67□□□□□ -0.7
LMBR1-210ENST00000434503 A8MUU9 505 aa10.65□□□□□ -0.7
LMBR1-210ENST00000434503 J3KT08 172 aa10.63□□□□□ -0.71
LMBR1-210ENST00000434503 A0A1B0GV90 55 aa10.62□□□□□ -0.71
LMBR1-210ENST00000434503 DSCR10P59022 87 aa10.62□□□□□ -0.71
LMBR1-210ENST00000434503 ETDBQ3ZM63 59 aa10.62□□□□□ -0.71
LMBR1-210ENST00000434503 KRTAP9-8Q9BYQ0 159 aa10.62□□□□□ -0.71
LMBR1-210ENST00000434503 IGKV4-1P06312 121 aa10.6□□□□□ -0.71
LMBR1-210ENST00000434503 SIGMAR1Q99720 223 aa10.6□□□□□ -0.71
LMBR1-210ENST00000434503 NREPQ16612 68 aa10.58□□□□□ -0.72
LMBR1-210ENST00000434503 USH2AO75445 5202 aa10.58□□□□□ -0.72
LMBR1-210ENST00000434503 SSPOA2VEC9 5147 aa10.57□□□□□ -0.72
LMBR1-210ENST00000434503 LINC00313P59037 77 aa10.53□□□□□ -0.72
LMBR1-210ENST00000434503 DEFB116Q30KQ4 102 aa10.53□□□□□ -0.72
LMBR1-210ENST00000434503 NDUFB1O75438 58 aa10.49□□□□□ -0.73
LMBR1-210ENST00000434503 A0A1B0GVX0 72 aa10.48□□□□□ -0.73
LMBR1-210ENST00000434503 KRTAP16-1A8MUX0 517 aa10.48□□□□□ -0.73
LMBR1-210ENST00000434503 NOTCH2NLQ7Z3S9 236 aa10.48□□□□□ -0.73
LMBR1-210ENST00000434503 A8MWP4 228 aa10.47□□□□□ -0.73
LMBR1-210ENST00000434503 C8orf87E5RJ46 101 aa10.47□□□□□ -0.73
LMBR1-210ENST00000434503 Q6ZVQ6 151 aa10.47□□□□□ -0.73
LMBR1-210ENST00000434503 LINC00846Q9NV44 126 aa10.47□□□□□ -0.73
LMBR1-210ENST00000434503 UBL5Q9BZL1 73 aa10.46□□□□□ -0.73
LMBR1-210ENST00000434503 ACYP1P07311 99 aa10.45□□□□□ -0.74
LMBR1-210ENST00000434503 FAM240AA0A1B0GVK7 77 aa10.43□□□□□ -0.74
LMBR1-210ENST00000434503 IGHV6-1A0A0B4J1U7 121 aa10.42□□□□□ -0.74
LMBR1-210ENST00000434503 BPY2O14599 106 aa10.42□□□□□ -0.74
LMBR1-210ENST00000434503 MT2AP02795 61 aa10.42□□□□□ -0.74
LMBR1-210ENST00000434503 IGKV3D-7A0A0C4DH55 119 aa10.41□□□□□ -0.74
LMBR1-210ENST00000434503 PRR15Q8IV56 129 aa10.41□□□□□ -0.74
LMBR1-210ENST00000434503 FCGBPQ9Y6R7 5405 aaPredicted RBP10.39□□□□□ -0.75
LMBR1-210ENST00000434503 FAM236DA0A1B0GTK5 79 aa10.37□□□□□ -0.75
LMBR1-210ENST00000434503 FAM236CP0DP71 79 aa10.37□□□□□ -0.75
LMBR1-210ENST00000434503 LCE2BO14633 110 aa10.35□□□□□ -0.75
LMBR1-210ENST00000434503 KRTAP19-1Q8IUB9 90 aa10.35□□□□□ -0.75
LMBR1-210ENST00000434503 C8orf17Q9NRJ1 99 aa10.34□□□□□ -0.75
LMBR1-210ENST00000434503 MT1FP04733 61 aa10.33□□□□□ -0.76
LMBR1-210ENST00000434503 HRES1P13985 223 aa10.33□□□□□ -0.76
LMBR1-210ENST00000434503 CXCL6P80162 114 aa10.32□□□□□ -0.76
LMBR1-210ENST00000434503 RBM12B-AS1Q9P1G2 102 aa10.32□□□□□ -0.76
LMBR1-210ENST00000434503 K7EQZ3 153 aa10.31□□□□□ -0.76
LMBR1-210ENST00000434503 MPLKIPQ8TAP9 179 aa10.31□□□□□ -0.76
LMBR1-210ENST00000434503 KRTAP9-3Q9BYQ3 159 aa10.3□□□□□ -0.76
LMBR1-210ENST00000434503 Q8N9P0 234 aaPredicted RBP10.29□□□□□ -0.76
LMBR1-210ENST00000434503 J3QR89 54 aa10.28□□□□□ -0.76
LMBR1-210ENST00000434503 MMP24-AS1A0A0U1RRL7 71 aa10.27□□□□□ -0.77
LMBR1-210ENST00000434503 KRTAP10-10P60014 251 aa10.26□□□□□ -0.77
LMBR1-210ENST00000434503 TMEM254Q8TBM7 123 aa10.25□□□□□ -0.77
LMBR1-210ENST00000434503 hDV103S1A0JD37 113 aa10.23□□□□□ -0.77
LMBR1-210ENST00000434503 ATP5EP2Q5VTU8 51 aa10.23□□□□□ -0.77
LMBR1-210ENST00000434503 MACF1Q9UPN3 7388 aaKnown RBP10.21□□□□□ -0.77
LMBR1-210ENST00000434503 ZCCHC13Q8WW36 166 aaKnown RBP10.21□□□□□ -0.77
LMBR1-210ENST00000434503 MRPL34Q9BQ48 92 aaKnown RBP10.21□□□□□ -0.77
LMBR1-210ENST00000434503 Q8N9L7 120 aa10.2□□□□□ -0.78
LMBR1-210ENST00000434503 LINC00643Q86TS7 51 aa10.19□□□□□ -0.78
LMBR1-210ENST00000434503 SYNE2Q8WXH0 6885 aaKnown RBP10.17□□□□□ -0.78
LMBR1-210ENST00000434503 SPINK7P58062 85 aa10.16□□□□□ -0.78
LMBR1-210ENST00000434503 CASC2Q6XLA1 102 aa10.16□□□□□ -0.78
LMBR1-210ENST00000434503 HCG22E2RYF7 251 aa10.14□□□□□ -0.79
LMBR1-210ENST00000434503 K7ERU9 68 aa10.1□□□□□ -0.79
LMBR1-210ENST00000434503 WFDC13Q8IUB5 93 aa10.1□□□□□ -0.79
LMBR1-210ENST00000434503 KRTAP19-6Q3LI70 58 aa10.06□□□□□ -0.8
LMBR1-210ENST00000434503 NDUFS5O43920 106 aa10.03□□□□□ -0.8
LMBR1-210ENST00000434503 HIST1H4AP62805 103 aaKnown RBP10□□□□□ -0.81
LMBR1-210ENST00000434503 TP53AIP1Q9HCN2 124 aa10□□□□□ -0.81
LMBR1-210ENST00000434503 Q5W150 140 aa9.94□□□□□ -0.82
LMBR1-210ENST00000434503 IMUPQ9GZP8 106 aa9.92□□□□□ -0.82
LMBR1-210ENST00000434503 A0A087WVE0 104 aa9.88□□□□□ -0.83
LMBR1-210ENST00000434503 KRTAP6-3Q3LI67 103 aa9.86□□□□□ -0.83
LMBR1-210ENST00000434503 UQCRQO14949 82 aa9.82□□□□□ -0.84
LMBR1-210ENST00000434503 H1FX-AS1Q4G0G2 97 aa9.82□□□□□ -0.84
LMBR1-210ENST00000434503 C7orf65Q6ZTY9 151 aa9.82□□□□□ -0.84
LMBR1-210ENST00000434503 MT-ATP8P03928 68 aa9.8□□□□□ -0.84
LMBR1-210ENST00000434503 IGKV2D-30A0A075B6S6 120 aa9.78□□□□□ -0.84
LMBR1-210ENST00000434503 IGKV2-30P06310 120 aa9.78□□□□□ -0.84
LMBR1-210ENST00000434503 TRAV22A0A0B4J277 110 aa9.77□□□□□ -0.85
LMBR1-210ENST00000434503 OCR1Q9BZK8 76 aa9.75□□□□□ -0.85
LMBR1-210ENST00000434503 ATOX1O00244 68 aa9.72□□□□□ -0.85
LMBR1-210ENST00000434503 LOC101927531A0A1B0GV80 90 aa9.69□□□□□ -0.86
LMBR1-210ENST00000434503 SCGB1A1P11684 91 aa9.68□□□□□ -0.86
LMBR1-210ENST00000434503 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
LMBR1-210ENST00000434503 CYP4F30PQ9H0H9 118 aa9.67□□□□□ -0.86
LMBR1-210ENST00000434503 H0Y9P7 68 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms