RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 SEC61BP60468 96 aaKnown RBP10□□□□□ -0.81
HLA-F-220ENST00000434407 J3QR89 54 aa9.99□□□□□ -0.81
HLA-F-220ENST00000434407 RBM3P98179 157 aaKnown RBP9.99□□□□□ -0.81
HLA-F-220ENST00000434407 A0A1B0GV72 72 aa9.98□□□□□ -0.81
HLA-F-220ENST00000434407 K7ERU9 68 aa9.97□□□□□ -0.81
HLA-F-220ENST00000434407 Q96NJ1 140 aa9.96□□□□□ -0.82
HLA-F-220ENST00000434407 C14orf132Q9NPU4 83 aa9.96□□□□□ -0.82
HLA-F-220ENST00000434407 DSCR8Q96T75 97 aa9.95□□□□□ -0.82
HLA-F-220ENST00000434407 CCKP06307 115 aa9.94□□□□□ -0.82
HLA-F-220ENST00000434407 PDE6GP18545 87 aa9.92□□□□□ -0.82
HLA-F-220ENST00000434407 KRTAP4-1Q9BYQ7 146 aa9.92□□□□□ -0.82
HLA-F-220ENST00000434407 LOC110117498A0A087WWA1 95 aa9.91□□□□□ -0.82
HLA-F-220ENST00000434407 FAT4Q6V0I7 4981 aa9.88□□□□□ -0.83
HLA-F-220ENST00000434407 A0A0U1RQV1 116 aa9.88□□□□□ -0.83
HLA-F-220ENST00000434407 C21orf62-AS1Q17RA5 79 aa9.88□□□□□ -0.83
HLA-F-220ENST00000434407 Q6ZQT0 140 aa9.88□□□□□ -0.83
HLA-F-220ENST00000434407 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
HLA-F-220ENST00000434407 PCOTHQ58A44 107 aa9.86□□□□□ -0.83
HLA-F-220ENST00000434407 LINC00472Q9H8W2 130 aa9.86□□□□□ -0.83
HLA-F-220ENST00000434407 ACYP1P07311 99 aa9.85□□□□□ -0.83
HLA-F-220ENST00000434407 FAM240AA0A1B0GVK7 77 aa9.83□□□□□ -0.84
HLA-F-220ENST00000434407 VPS25Q9BRG1 176 aa9.83□□□□□ -0.84
HLA-F-220ENST00000434407 IGKV4-1P06312 121 aa9.8□□□□□ -0.84
HLA-F-220ENST00000434407 Q75L30 129 aa9.8□□□□□ -0.84
HLA-F-220ENST00000434407 A0A1B0GW54 56 aa9.79□□□□□ -0.84
HLA-F-220ENST00000434407 SIGMAR1Q99720 223 aa9.79□□□□□ -0.84
HLA-F-220ENST00000434407 KRTAP4-9Q9BYQ8 210 aa9.79□□□□□ -0.84
HLA-F-220ENST00000434407 DEFB116Q30KQ4 102 aa9.76□□□□□ -0.85
HLA-F-220ENST00000434407 C20orf166-AS1Q96NR2 134 aa9.75□□□□□ -0.85
HLA-F-220ENST00000434407 LINC00846Q9NV44 126 aa9.74□□□□□ -0.85
HLA-F-220ENST00000434407 A8MUU9 505 aa9.73□□□□□ -0.85
HLA-F-220ENST00000434407 DSCR10P59022 87 aa9.73□□□□□ -0.85
HLA-F-220ENST00000434407 LINC00313P59037 77 aa9.71□□□□□ -0.86
HLA-F-220ENST00000434407 UBL5Q9BZL1 73 aa9.7□□□□□ -0.86
HLA-F-220ENST00000434407 KRTAP16-1A8MUX0 517 aa9.69□□□□□ -0.86
HLA-F-220ENST00000434407 J3KT08 172 aa9.69□□□□□ -0.86
HLA-F-220ENST00000434407 NOTCH2NLQ7Z3S9 236 aa9.69□□□□□ -0.86
HLA-F-220ENST00000434407 ATP11AUNQ6ZP68 121 aa9.68□□□□□ -0.86
HLA-F-220ENST00000434407 KRTAP19-2Q3LHN2 52 aa9.67□□□□□ -0.86
HLA-F-220ENST00000434407 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
HLA-F-220ENST00000434407 NREPQ16612 68 aa9.66□□□□□ -0.86
HLA-F-220ENST00000434407 LINC00643Q86TS7 51 aa9.66□□□□□ -0.86
HLA-F-220ENST00000434407 IGHV6-1A0A0B4J1U7 121 aa9.65□□□□□ -0.86
HLA-F-220ENST00000434407 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
HLA-F-220ENST00000434407 Q6ZVQ6 151 aa9.64□□□□□ -0.87
HLA-F-220ENST00000434407 KRTAP4-2Q9BYR5 136 aa9.62□□□□□ -0.87
HLA-F-220ENST00000434407 A8MWP4 228 aa9.59□□□□□ -0.87
HLA-F-220ENST00000434407 NDUFB1O75438 58 aa9.58□□□□□ -0.88
HLA-F-220ENST00000434407 MT-ATP8P03928 68 aa9.58□□□□□ -0.88
HLA-F-220ENST00000434407 IGKV3D-7A0A0C4DH55 119 aa9.56□□□□□ -0.88
HLA-F-220ENST00000434407 ATP5EP2Q5VTU8 51 aa9.56□□□□□ -0.88
HLA-F-220ENST00000434407 BPY2O14599 106 aa9.53□□□□□ -0.88
HLA-F-220ENST00000434407 CXCL6P80162 114 aa9.53□□□□□ -0.88
HLA-F-220ENST00000434407 LCE4AQ5TA78 99 aa9.52□□□□□ -0.89
HLA-F-220ENST00000434407 PRR15Q8IV56 129 aa9.52□□□□□ -0.89
HLA-F-220ENST00000434407 C8orf17Q9NRJ1 99 aa9.52□□□□□ -0.89
HLA-F-220ENST00000434407 FLGP20930 4061 aaPredicted RBP9.52□□□□□ -0.89
HLA-F-220ENST00000434407 Q8N9P0 234 aaPredicted RBP9.49□□□□□ -0.89
HLA-F-220ENST00000434407 IMUPQ9GZP8 106 aa9.49□□□□□ -0.89
HLA-F-220ENST00000434407 MT1HP80294 61 aa9.47□□□□□ -0.89
HLA-F-220ENST00000434407 K7EQZ3 153 aa9.44□□□□□ -0.9
HLA-F-220ENST00000434407 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
HLA-F-220ENST00000434407 MMP24-AS1A0A0U1RRL7 71 aa9.43□□□□□ -0.9
HLA-F-220ENST00000434407 KRTAP4-11Q9BYQ6 195 aa9.42□□□□□ -0.9
HLA-F-220ENST00000434407 COX6B2Q6YFQ2 88 aa9.41□□□□□ -0.9
HLA-F-220ENST00000434407 ZCCHC13Q8WW36 166 aaKnown RBP9.41□□□□□ -0.9
HLA-F-220ENST00000434407 Q8N9L7 120 aa9.39□□□□□ -0.91
HLA-F-220ENST00000434407 TMEM254Q8TBM7 123 aa9.39□□□□□ -0.91
HLA-F-220ENST00000434407 MRPL34Q9BQ48 92 aaKnown RBP9.37□□□□□ -0.91
HLA-F-220ENST00000434407 A0A087WVE0 104 aa9.36□□□□□ -0.91
HLA-F-220ENST00000434407 hDV103S1A0JD37 113 aa9.36□□□□□ -0.91
HLA-F-220ENST00000434407 SCGB1A1P11684 91 aa9.35□□□□□ -0.91
HLA-F-220ENST00000434407 MPLKIPQ8TAP9 179 aa9.35□□□□□ -0.91
HLA-F-220ENST00000434407 HRES1P13985 223 aa9.34□□□□□ -0.91
HLA-F-220ENST00000434407 KRTAP19-4Q3LI73 84 aa9.32□□□□□ -0.92
HLA-F-220ENST00000434407 FAM236AA0A1B0GUQ0 79 aa9.29□□□□□ -0.92
HLA-F-220ENST00000434407 FAM236BA0A1B0GV22 79 aa9.29□□□□□ -0.92
HLA-F-220ENST00000434407 SPINK7P58062 85 aa9.27□□□□□ -0.93
HLA-F-220ENST00000434407 HCG22E2RYF7 251 aa9.26□□□□□ -0.93
HLA-F-220ENST00000434407 KRTAP10-6P60371 365 aaPredicted RBP9.25□□□□□ -0.93
HLA-F-220ENST00000434407 CASC2Q6XLA1 102 aa9.25□□□□□ -0.93
HLA-F-220ENST00000434407 KRTAP9-7A8MTY7 169 aa9.24□□□□□ -0.93
HLA-F-220ENST00000434407 WFDC13Q8IUB5 93 aa9.24□□□□□ -0.93
HLA-F-220ENST00000434407 RBM12B-AS1Q9P1G2 102 aa9.24□□□□□ -0.93
HLA-F-220ENST00000434407 M0R2T5 61 aa9.23□□□□□ -0.93
HLA-F-220ENST00000434407 NDUFS5O43920 106 aa9.22□□□□□ -0.93
HLA-F-220ENST00000434407 ATOX1O00244 68 aa9.21□□□□□ -0.94
HLA-F-220ENST00000434407 FAM236DA0A1B0GTK5 79 aa9.18□□□□□ -0.94
HLA-F-220ENST00000434407 FAM236CP0DP71 79 aa9.18□□□□□ -0.94
HLA-F-220ENST00000434407 Q5W150 140 aa9.18□□□□□ -0.94
HLA-F-220ENST00000434407 LCE5AQ5TCM9 118 aa9.17□□□□□ -0.94
HLA-F-220ENST00000434407 SMIM20Q8N5G0 67 aa9.14□□□□□ -0.95
HLA-F-220ENST00000434407 ANAPC13Q9BS18 74 aa9.14□□□□□ -0.95
HLA-F-220ENST00000434407 TRAV7A0A075B6U4 112 aa9.09□□□□□ -0.95
HLA-F-220ENST00000434407 SERP2Q8N6R1 65 aa9.08□□□□□ -0.96
HLA-F-220ENST00000434407 OCR1Q9BZK8 76 aa9.08□□□□□ -0.96
HLA-F-220ENST00000434407 PCP4P48539 62 aa9.06□□□□□ -0.96
HLA-F-220ENST00000434407 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
HLA-F-220ENST00000434407 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
HLA-F-220ENST00000434407 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms