RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 C4orf48Q5BLP8 95 aa4.74□□□□□ -1.65
CNKSR3-202ENST00000433165 SPAG11AQ6PDA7 123 aa4.74□□□□□ -1.65
CNKSR3-202ENST00000433165 A0A087WTM6 91 aa4.73□□□□□ -1.65
CNKSR3-202ENST00000433165 C14orf177Q52M58 125 aa4.73□□□□□ -1.65
CNKSR3-202ENST00000433165 ASB16-AS1Q495Z4 193 aa4.72□□□□□ -1.65
CNKSR3-202ENST00000433165 TP53AIP1Q9HCN2 124 aa4.72□□□□□ -1.65
CNKSR3-202ENST00000433165 PCOTHQ58A44 107 aa4.71□□□□□ -1.66
CNKSR3-202ENST00000433165 DNAH10Q8IVF4 4471 aa4.71□□□□□ -1.66
CNKSR3-202ENST00000433165 EPPK1P58107 5090 aaKnown RBP4.71□□□□□ -1.66
CNKSR3-202ENST00000433165 HRES1P13985 223 aa4.71□□□□□ -1.66
CNKSR3-202ENST00000433165 IGLV5-52A0A0A0MRZ9 124 aa4.7□□□□□ -1.66
CNKSR3-202ENST00000433165 SPRR1BP22528 89 aa4.7□□□□□ -1.66
CNKSR3-202ENST00000433165 LINC00313P59037 77 aa4.7□□□□□ -1.66
CNKSR3-202ENST00000433165 KMT2AQ03164 3969 aa4.7□□□□□ -1.66
CNKSR3-202ENST00000433165 IGKV2-24A0A0C4DH68 120 aa4.69□□□□□ -1.66
CNKSR3-202ENST00000433165 PRLHP81277 87 aa4.69□□□□□ -1.66
CNKSR3-202ENST00000433165 KRTAP10-2P60368 255 aa4.68□□□□□ -1.66
CNKSR3-202ENST00000433165 DNAH17Q9UFH2 4485 aa4.68□□□□□ -1.66
CNKSR3-202ENST00000433165 H0Y9J4 135 aa4.68□□□□□ -1.66
CNKSR3-202ENST00000433165 PLA2G1BP04054 148 aaKnown RBP4.67□□□□□ -1.66
CNKSR3-202ENST00000433165 Q8N1X5 172 aa4.67□□□□□ -1.66
CNKSR3-202ENST00000433165 A0A087X002 238 aa4.66□□□□□ -1.66
CNKSR3-202ENST00000433165 HECTD4Q9Y4D8 3996 aa4.66□□□□□ -1.66
CNKSR3-202ENST00000433165 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
CNKSR3-202ENST00000433165 LINC01554Q52M75 96 aa4.65□□□□□ -1.66
CNKSR3-202ENST00000433165 FRAS1Q86XX4 4008 aa4.65□□□□□ -1.67
CNKSR3-202ENST00000433165 Q96NJ1 140 aa4.64□□□□□ -1.67
CNKSR3-202ENST00000433165 FAM229AH3BQW9 127 aa4.64□□□□□ -1.67
CNKSR3-202ENST00000433165 C8orf17Q9NRJ1 99 aa4.64□□□□□ -1.67
CNKSR3-202ENST00000433165 KRTAP10-1P60331 282 aa4.62□□□□□ -1.67
CNKSR3-202ENST00000433165 DNAH11Q96DT5 4516 aa4.62□□□□□ -1.67
CNKSR3-202ENST00000433165 ADM2Q7Z4H4 148 aa4.62□□□□□ -1.67
CNKSR3-202ENST00000433165 FAT2Q9NYQ8 4349 aa4.62□□□□□ -1.67
CNKSR3-202ENST00000433165 A0A096LNI7 61 aa4.61□□□□□ -1.67
CNKSR3-202ENST00000433165 PRR26Q8N8Z3 221 aa4.61□□□□□ -1.67
CNKSR3-202ENST00000433165 DNAH2Q9P225 4427 aa4.61□□□□□ -1.67
CNKSR3-202ENST00000433165 PKD1P98161 4303 aa4.6□□□□□ -1.67
CNKSR3-202ENST00000433165 H3BS24 57 aa4.6□□□□□ -1.67
CNKSR3-202ENST00000433165 Q6ZSA8 131 aa4.6□□□□□ -1.67
CNKSR3-202ENST00000433165 MRPL34Q9BQ48 92 aaKnown RBP4.6□□□□□ -1.67
CNKSR3-202ENST00000433165 HERC2O95714 4834 aa4.59□□□□□ -1.67
CNKSR3-202ENST00000433165 Q5VSD8 79 aa4.59□□□□□ -1.67
CNKSR3-202ENST00000433165 SPATA8Q6RVD6 105 aa4.59□□□□□ -1.67
CNKSR3-202ENST00000433165 DYNC1H1Q14204 4646 aaKnown RBP4.59□□□□□ -1.68
CNKSR3-202ENST00000433165 A0A1B0GVX0 72 aa4.58□□□□□ -1.68
CNKSR3-202ENST00000433165 KRTAP11-1Q8IUC1 163 aa4.58□□□□□ -1.68
CNKSR3-202ENST00000433165 ACYP2P14621 99 aa4.57□□□□□ -1.68
CNKSR3-202ENST00000433165 KRTAP13-3Q3SY46 172 aa4.57□□□□□ -1.68
CNKSR3-202ENST00000433165 SRRM2Q9UQ35 2752 aaKnown RBP4.56□□□□□ -1.68
CNKSR3-202ENST00000433165 IGHV6-1A0A0B4J1U7 121 aa4.56□□□□□ -1.68
CNKSR3-202ENST00000433165 KRTAP13-1Q8IUC0 172 aa4.55□□□□□ -1.68
CNKSR3-202ENST00000433165 DMAC1Q96GE9 116 aa4.55□□□□□ -1.68
CNKSR3-202ENST00000433165 A0A1B0GU69 56 aa4.54□□□□□ -1.68
CNKSR3-202ENST00000433165 CHTF8P0CG12 524 aa4.54□□□□□ -1.68
CNKSR3-202ENST00000433165 KIAA1109Q2LD37 5005 aa4.53□□□□□ -1.68
CNKSR3-202ENST00000433165 SMR3BP02814 79 aaPredicted RBP4.53□□□□□ -1.68
CNKSR3-202ENST00000433165 KRTAP17-1Q9BYP8 105 aa4.53□□□□□ -1.68
CNKSR3-202ENST00000433165 Q5W150 140 aa4.52□□□□□ -1.69
CNKSR3-202ENST00000433165 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
CNKSR3-202ENST00000433165 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
CNKSR3-202ENST00000433165 CIRBP-AS1Q8TBR5 109 aa4.52□□□□□ -1.69
CNKSR3-202ENST00000433165 KRTAP4-5Q9BYR2 181 aa4.52□□□□□ -1.69
CNKSR3-202ENST00000433165 RYR1P21817 5038 aa4.52□□□□□ -1.69
CNKSR3-202ENST00000433165 UQCR11O14957 56 aa4.51□□□□□ -1.69
CNKSR3-202ENST00000433165 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
CNKSR3-202ENST00000433165 LINC00483Q53H64 154 aa4.51□□□□□ -1.69
CNKSR3-202ENST00000433165 IGLV9-49A0A0B4J1Y8 123 aa4.5□□□□□ -1.69
CNKSR3-202ENST00000433165 RETNLBQ9BQ08 111 aa4.5□□□□□ -1.69
CNKSR3-202ENST00000433165 SPACA4Q8TDM5 124 aa4.5□□□□□ -1.69
CNKSR3-202ENST00000433165 CSAG1Q6PB30 78 aa4.49□□□□□ -1.69
CNKSR3-202ENST00000433165 LRP1BQ9NZR2 4599 aa4.49□□□□□ -1.69
CNKSR3-202ENST00000433165 J3QL48 77 aa4.49□□□□□ -1.69
CNKSR3-202ENST00000433165 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.47□□□□□ -1.69
CNKSR3-202ENST00000433165 DNAH5Q8TE73 4624 aa4.47□□□□□ -1.69
CNKSR3-202ENST00000433165 HSPG2P98160 4391 aa4.46□□□□□ -1.69
CNKSR3-202ENST00000433165 APOBP04114 4563 aaKnown RBP4.46□□□□□ -1.7
CNKSR3-202ENST00000433165 ZNF861PO60384 105 aa4.45□□□□□ -1.7
CNKSR3-202ENST00000433165 ZNF706Q9Y5V0 76 aaPredicted RBP4.44□□□□□ -1.7
CNKSR3-202ENST00000433165 IGKV2-30P06310 120 aa4.43□□□□□ -1.7
CNKSR3-202ENST00000433165 PANO1I0J062 215 aa4.42□□□□□ -1.7
CNKSR3-202ENST00000433165 KRTAP10-4P60372 401 aaPredicted RBP4.42□□□□□ -1.7
CNKSR3-202ENST00000433165 SPINK6Q6UWN8 80 aa4.41□□□□□ -1.7
CNKSR3-202ENST00000433165 IGLV7-43P04211 117 aa4.41□□□□□ -1.7
CNKSR3-202ENST00000433165 PCLOQ9Y6V0 5065 aa4.41□□□□□ -1.7
CNKSR3-202ENST00000433165 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.71
CNKSR3-202ENST00000433165 ABCA13Q86UQ4 5058 aa4.39□□□□□ -1.71
CNKSR3-202ENST00000433165 VPS13BQ7Z7G8 4022 aa4.38□□□□□ -1.71
CNKSR3-202ENST00000433165 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
CNKSR3-202ENST00000433165 ANAPC11Q9NYG5 84 aa4.36□□□□□ -1.71
CNKSR3-202ENST00000433165 A8MUU9 505 aa4.35□□□□□ -1.71
CNKSR3-202ENST00000433165 ROMO1P60602 79 aa4.35□□□□□ -1.71
CNKSR3-202ENST00000433165 PSORS1C2Q9UIG4 136 aa4.34□□□□□ -1.71
CNKSR3-202ENST00000433165 IGKV2D-30A0A075B6S6 120 aa4.34□□□□□ -1.72
CNKSR3-202ENST00000433165 KRTAP16-1A8MUX0 517 aa4.32□□□□□ -1.72
CNKSR3-202ENST00000433165 DMBT1Q9UGM3 2413 aaPredicted RBP4.31□□□□□ -1.72
CNKSR3-202ENST00000433165 H0YAA0 97 aa4.3□□□□□ -1.72
CNKSR3-202ENST00000433165 LINC00304Q8N9R0 145 aa4.3□□□□□ -1.72
CNKSR3-202ENST00000433165 SSBP3-AS1Q7Z2R9 100 aa4.3□□□□□ -1.72
CNKSR3-202ENST00000433165 FAT1Q14517 4588 aa4.3□□□□□ -1.72
CNKSR3-202ENST00000433165 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms