RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 DNAH10OSP0CZ25 163 aa5.04□□□□□ -1.6
VTI1A-202ENST00000432306 PLECQ15149 4684 aaKnown RBP5.04□□□□□ -1.6
VTI1A-202ENST00000432306 IGKV2D-24A0A075B6R9 120 aa5.03□□□□□ -1.6
VTI1A-202ENST00000432306 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
VTI1A-202ENST00000432306 LOC101927531A0A1B0GV80 90 aa5.03□□□□□ -1.6
VTI1A-202ENST00000432306 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
VTI1A-202ENST00000432306 Q8N9P0 234 aaPredicted RBP5.03□□□□□ -1.6
VTI1A-202ENST00000432306 C9orf163Q8N9P6 203 aa5.03□□□□□ -1.6
VTI1A-202ENST00000432306 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
VTI1A-202ENST00000432306 FRAS1Q86XX4 4008 aa5.02□□□□□ -1.61
VTI1A-202ENST00000432306 IGFL1Q6UW32 110 aa5.02□□□□□ -1.61
VTI1A-202ENST00000432306 RYR1P21817 5038 aa5.01□□□□□ -1.61
VTI1A-202ENST00000432306 LRCOL1A6NCL2 159 aa5□□□□□ -1.61
VTI1A-202ENST00000432306 LY6G6CO95867 125 aa5□□□□□ -1.61
VTI1A-202ENST00000432306 SPRR1BP22528 89 aa5□□□□□ -1.61
VTI1A-202ENST00000432306 LINC00208Q96KT6 92 aa5□□□□□ -1.61
VTI1A-202ENST00000432306 A6NN06 94 aa5□□□□□ -1.61
VTI1A-202ENST00000432306 HECTD4Q9Y4D8 3996 aa4.99□□□□□ -1.61
VTI1A-202ENST00000432306 IGLV7-46A0A075B6I9 117 aa4.98□□□□□ -1.61
VTI1A-202ENST00000432306 FAM168BA1KXE4 195 aa4.98□□□□□ -1.61
VTI1A-202ENST00000432306 A0A1B0GVX0 72 aa4.97□□□□□ -1.61
VTI1A-202ENST00000432306 A8MWP4 228 aa4.97□□□□□ -1.61
VTI1A-202ENST00000432306 H0Y9P7 68 aa4.97□□□□□ -1.61
VTI1A-202ENST00000432306 LINC00472Q9H8W2 130 aa4.97□□□□□ -1.61
VTI1A-202ENST00000432306 A0A087WSZ3 146 aa4.97□□□□□ -1.61
VTI1A-202ENST00000432306 CNBPP62633 177 aaKnown RBP4.97□□□□□ -1.61
VTI1A-202ENST00000432306 PLAC8Q9NZF1 115 aa4.97□□□□□ -1.61
VTI1A-202ENST00000432306 C16orf90A8MZG2 172 aa4.96□□□□□ -1.62
VTI1A-202ENST00000432306 CASC2Q6XLA1 102 aa4.96□□□□□ -1.62
VTI1A-202ENST00000432306 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
VTI1A-202ENST00000432306 KRTAP9-8Q9BYQ0 159 aa4.96□□□□□ -1.62
VTI1A-202ENST00000432306 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
VTI1A-202ENST00000432306 NUPR2A6NF83 97 aa4.95□□□□□ -1.62
VTI1A-202ENST00000432306 ADM2Q7Z4H4 148 aa4.95□□□□□ -1.62
VTI1A-202ENST00000432306 WFDC13Q8IUB5 93 aa4.95□□□□□ -1.62
VTI1A-202ENST00000432306 KMT2AQ03164 3969 aa4.95□□□□□ -1.62
VTI1A-202ENST00000432306 DNAH10Q8IVF4 4471 aa4.94□□□□□ -1.62
VTI1A-202ENST00000432306 KIAA1109Q2LD37 5005 aa4.94□□□□□ -1.62
VTI1A-202ENST00000432306 DEFB131BA0A096LNP1 70 aa4.93□□□□□ -1.62
VTI1A-202ENST00000432306 A6NED7 52 aa4.93□□□□□ -1.62
VTI1A-202ENST00000432306 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
VTI1A-202ENST00000432306 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
VTI1A-202ENST00000432306 MMP24-AS1A0A0U1RRL7 71 aa4.92□□□□□ -1.62
VTI1A-202ENST00000432306 CHKB-CPT1BH3BT56 60 aa4.92□□□□□ -1.62
VTI1A-202ENST00000432306 TP53AIP1Q9HCN2 124 aa4.92□□□□□ -1.62
VTI1A-202ENST00000432306 Q6ZR54 194 aa4.92□□□□□ -1.62
VTI1A-202ENST00000432306 COA5Q86WW8 74 aa4.92□□□□□ -1.62
VTI1A-202ENST00000432306 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
VTI1A-202ENST00000432306 A8MU10 97 aa4.91□□□□□ -1.62
VTI1A-202ENST00000432306 RETNLBQ9BQ08 111 aa4.91□□□□□ -1.62
VTI1A-202ENST00000432306 RPL37AP61513 92 aaKnown RBP4.9□□□□□ -1.62
VTI1A-202ENST00000432306 CIRBP-AS1Q8TBR5 109 aa4.9□□□□□ -1.62
VTI1A-202ENST00000432306 MOBPQ13875 183 aa4.89□□□□□ -1.63
VTI1A-202ENST00000432306 DEFB116Q30KQ4 102 aa4.89□□□□□ -1.63
VTI1A-202ENST00000432306 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
VTI1A-202ENST00000432306 A0A0G2JQZ4 141 aa4.88□□□□□ -1.63
VTI1A-202ENST00000432306 A0A1W2PNN7 141 aa4.88□□□□□ -1.63
VTI1A-202ENST00000432306 PRLHP81277 87 aa4.88□□□□□ -1.63
VTI1A-202ENST00000432306 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
VTI1A-202ENST00000432306 A0A096LNI7 61 aa4.86□□□□□ -1.63
VTI1A-202ENST00000432306 Q96NJ1 140 aa4.86□□□□□ -1.63
VTI1A-202ENST00000432306 DNAH6Q9C0G6 4158 aa4.86□□□□□ -1.63
VTI1A-202ENST00000432306 KRTAP13-1Q8IUC0 172 aa4.85□□□□□ -1.63
VTI1A-202ENST00000432306 ABCA13Q86UQ4 5058 aa4.85□□□□□ -1.63
VTI1A-202ENST00000432306 IGKV2-24A0A0C4DH68 120 aa4.84□□□□□ -1.63
VTI1A-202ENST00000432306 A0A1B0GVY2 172 aa4.84□□□□□ -1.63
VTI1A-202ENST00000432306 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
VTI1A-202ENST00000432306 VPS13DQ5THJ4 4388 aa4.82□□□□□ -1.64
VTI1A-202ENST00000432306 PKHD1P08F94 4074 aa4.82□□□□□ -1.64
VTI1A-202ENST00000432306 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
VTI1A-202ENST00000432306 DNAH11Q96DT5 4516 aa4.81□□□□□ -1.64
VTI1A-202ENST00000432306 C14orf177Q52M58 125 aa4.81□□□□□ -1.64
VTI1A-202ENST00000432306 LINC00483Q53H64 154 aa4.81□□□□□ -1.64
VTI1A-202ENST00000432306 KRTAP11-1Q8IUC1 163 aa4.81□□□□□ -1.64
VTI1A-202ENST00000432306 SPTSSBQ8NFR3 76 aa4.81□□□□□ -1.64
VTI1A-202ENST00000432306 HRES1P13985 223 aa4.8□□□□□ -1.64
VTI1A-202ENST00000432306 ROMO1P60602 79 aa4.8□□□□□ -1.64
VTI1A-202ENST00000432306 DYNC1H1Q14204 4646 aaKnown RBP4.8□□□□□ -1.64
VTI1A-202ENST00000432306 DNAH17Q9UFH2 4485 aa4.79□□□□□ -1.64
VTI1A-202ENST00000432306 FAT2Q9NYQ8 4349 aa4.78□□□□□ -1.64
VTI1A-202ENST00000432306 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
VTI1A-202ENST00000432306 KRTAP13-3Q3SY46 172 aa4.78□□□□□ -1.64
VTI1A-202ENST00000432306 MRPL34Q9BQ48 92 aaKnown RBP4.78□□□□□ -1.64
VTI1A-202ENST00000432306 APLNQ9ULZ1 77 aa4.78□□□□□ -1.64
VTI1A-202ENST00000432306 SPAG11AQ6PDA7 123 aa4.77□□□□□ -1.65
VTI1A-202ENST00000432306 DNAH2Q9P225 4427 aa4.77□□□□□ -1.65
VTI1A-202ENST00000432306 A8MUU9 505 aa4.77□□□□□ -1.65
VTI1A-202ENST00000432306 PCOTHQ58A44 107 aa4.77□□□□□ -1.65
VTI1A-202ENST00000432306 DMBT1Q9UGM3 2413 aaPredicted RBP4.76□□□□□ -1.65
VTI1A-202ENST00000432306 RTL8CO15255 209 aa4.76□□□□□ -1.65
VTI1A-202ENST00000432306 SPINK7P58062 85 aa4.76□□□□□ -1.65
VTI1A-202ENST00000432306 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
VTI1A-202ENST00000432306 C1orf134Q5TEV5 83 aa4.76□□□□□ -1.65
VTI1A-202ENST00000432306 KRTAP1-5Q9BYS1 174 aa4.76□□□□□ -1.65
VTI1A-202ENST00000432306 HSPG2P98160 4391 aa4.74□□□□□ -1.65
VTI1A-202ENST00000432306 PKD1P98161 4303 aa4.74□□□□□ -1.65
VTI1A-202ENST00000432306 ACYP2P14621 99 aa4.72□□□□□ -1.65
VTI1A-202ENST00000432306 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
VTI1A-202ENST00000432306 DMAC1Q96GE9 116 aa4.72□□□□□ -1.65
VTI1A-202ENST00000432306 HERC1Q15751 4861 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms