RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 SPATA45Q537H7 98 aa4.77□□□□□ -1.65
CDC42-IT1-201ENST00000431803 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
CDC42-IT1-201ENST00000431803 PRO1854Q9UHT4 67 aa4.77□□□□□ -1.65
CDC42-IT1-201ENST00000431803 TRBV20-1A0A075B6N2 111 aa4.76□□□□□ -1.65
CDC42-IT1-201ENST00000431803 IGKV2D-30A0A075B6S6 120 aa4.76□□□□□ -1.65
CDC42-IT1-201ENST00000431803 FABP2P12104 132 aa4.76□□□□□ -1.65
CDC42-IT1-201ENST00000431803 CEND1Q8N111 149 aa4.76□□□□□ -1.65
CDC42-IT1-201ENST00000431803 KRTAP16-1A8MUX0 517 aa4.75□□□□□ -1.65
CDC42-IT1-201ENST00000431803 FXYD2P54710 66 aa4.75□□□□□ -1.65
CDC42-IT1-201ENST00000431803 SIGMAR1Q99720 223 aa4.75□□□□□ -1.65
CDC42-IT1-201ENST00000431803 VAMP8Q9BV40 100 aa4.75□□□□□ -1.65
CDC42-IT1-201ENST00000431803 TRBV7-4A0A0J9YYF1 115 aa4.74□□□□□ -1.65
CDC42-IT1-201ENST00000431803 LINC00313P59037 77 aa4.73□□□□□ -1.65
CDC42-IT1-201ENST00000431803 IGKV4-1P06312 121 aa4.72□□□□□ -1.65
CDC42-IT1-201ENST00000431803 ANKRD29Q8N6D5 301 aa4.72□□□□□ -1.65
CDC42-IT1-201ENST00000431803 H3BQ85 93 aa4.71□□□□□ -1.66
CDC42-IT1-201ENST00000431803 DNAL4O96015 105 aa4.71□□□□□ -1.66
CDC42-IT1-201ENST00000431803 MT2AP02795 61 aa4.71□□□□□ -1.66
CDC42-IT1-201ENST00000431803 NOTCH2NLQ7Z3S9 236 aa4.71□□□□□ -1.66
CDC42-IT1-201ENST00000431803 LINC00472Q9H8W2 130 aa4.71□□□□□ -1.66
CDC42-IT1-201ENST00000431803 ORMDL1Q9P0S3 153 aa4.71□□□□□ -1.66
CDC42-IT1-201ENST00000431803 HRES1P13985 223 aa4.7□□□□□ -1.66
CDC42-IT1-201ENST00000431803 FCGBPQ9Y6R7 5405 aaPredicted RBP4.69□□□□□ -1.66
CDC42-IT1-201ENST00000431803 A0A1B0GV72 72 aa4.69□□□□□ -1.66
CDC42-IT1-201ENST00000431803 TMEM256-PLSCR3K7ERE1 68 aa4.69□□□□□ -1.66
CDC42-IT1-201ENST00000431803 FAM236DA0A1B0GTK5 79 aa4.68□□□□□ -1.66
CDC42-IT1-201ENST00000431803 K7ERJ3 54 aa4.68□□□□□ -1.66
CDC42-IT1-201ENST00000431803 CCKP06307 115 aa4.68□□□□□ -1.66
CDC42-IT1-201ENST00000431803 FAM236CP0DP71 79 aa4.68□□□□□ -1.66
CDC42-IT1-201ENST00000431803 HSD52Q0P140 79 aa4.68□□□□□ -1.66
CDC42-IT1-201ENST00000431803 DEFB116Q30KQ4 102 aa4.68□□□□□ -1.66
CDC42-IT1-201ENST00000431803 IGHV6-1A0A0B4J1U7 121 aa4.67□□□□□ -1.66
CDC42-IT1-201ENST00000431803 TRACP01848 142 aa4.67□□□□□ -1.66
CDC42-IT1-201ENST00000431803 MT1FP04733 61 aa4.67□□□□□ -1.66
CDC42-IT1-201ENST00000431803 PSMB2P49721 201 aa4.67□□□□□ -1.66
CDC42-IT1-201ENST00000431803 RBM12B-AS1Q9P1G2 102 aa4.67□□□□□ -1.66
CDC42-IT1-201ENST00000431803 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
CDC42-IT1-201ENST00000431803 COX6CP09669 75 aa4.65□□□□□ -1.67
CDC42-IT1-201ENST00000431803 PYY3Q5JQD4 70 aa4.65□□□□□ -1.67
CDC42-IT1-201ENST00000431803 A0A1B0GVX0 72 aa4.64□□□□□ -1.67
CDC42-IT1-201ENST00000431803 C8orf87E5RJ46 101 aa4.64□□□□□ -1.67
CDC42-IT1-201ENST00000431803 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
CDC42-IT1-201ENST00000431803 RBM3P98179 157 aaKnown RBP4.61□□□□□ -1.67
CDC42-IT1-201ENST00000431803 C5orf47Q569G3 176 aa4.61□□□□□ -1.67
CDC42-IT1-201ENST00000431803 ZCCHC13Q8WW36 166 aaKnown RBP4.61□□□□□ -1.67
CDC42-IT1-201ENST00000431803 VPS25Q9BRG1 176 aa4.61□□□□□ -1.67
CDC42-IT1-201ENST00000431803 DSCR8Q96T75 97 aa4.6□□□□□ -1.67
CDC42-IT1-201ENST00000431803 J3KT08 172 aa4.59□□□□□ -1.67
CDC42-IT1-201ENST00000431803 SPINK7P58062 85 aa4.59□□□□□ -1.67
CDC42-IT1-201ENST00000431803 UQCR10Q9UDW1 63 aa4.59□□□□□ -1.67
CDC42-IT1-201ENST00000431803 Q6ZQT0 140 aa4.58□□□□□ -1.68
CDC42-IT1-201ENST00000431803 MTURNQ8N3F0 131 aa4.58□□□□□ -1.68
CDC42-IT1-201ENST00000431803 C9JAW5 83 aa4.57□□□□□ -1.68
CDC42-IT1-201ENST00000431803 SCGB1C2P0DMR2 95 aa4.57□□□□□ -1.68
CDC42-IT1-201ENST00000431803 BAALC-AS2P0C853 105 aa4.56□□□□□ -1.68
CDC42-IT1-201ENST00000431803 Q6ZVQ6 151 aa4.56□□□□□ -1.68
CDC42-IT1-201ENST00000431803 A0A1B0GW54 56 aa4.54□□□□□ -1.68
CDC42-IT1-201ENST00000431803 A8MWP4 228 aa4.54□□□□□ -1.68
CDC42-IT1-201ENST00000431803 NDUFB1O75438 58 aa4.54□□□□□ -1.68
CDC42-IT1-201ENST00000431803 V9GYY9 64 aa4.54□□□□□ -1.68
CDC42-IT1-201ENST00000431803 LOC110117498A0A087WWA1 95 aa4.53□□□□□ -1.68
CDC42-IT1-201ENST00000431803 WFDC13Q8IUB5 93 aa4.53□□□□□ -1.68
CDC42-IT1-201ENST00000431803 C8orf17Q9NRJ1 99 aa4.53□□□□□ -1.68
CDC42-IT1-201ENST00000431803 IGKV3D-7A0A0C4DH55 119 aa4.52□□□□□ -1.69
CDC42-IT1-201ENST00000431803 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
CDC42-IT1-201ENST00000431803 JMJD7-PLA2G4BH0Y9G9 81 aa4.51□□□□□ -1.69
CDC42-IT1-201ENST00000431803 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
CDC42-IT1-201ENST00000431803 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
CDC42-IT1-201ENST00000431803 ATXN8Q156A1 80 aa4.5□□□□□ -1.69
CDC42-IT1-201ENST00000431803 SYNE2Q8WXH0 6885 aaKnown RBP4.49□□□□□ -1.69
CDC42-IT1-201ENST00000431803 PDE6GP18545 87 aa4.49□□□□□ -1.69
CDC42-IT1-201ENST00000431803 LYRM7Q5U5X0 104 aa4.49□□□□□ -1.69
CDC42-IT1-201ENST00000431803 PRR15Q8IV56 129 aa4.48□□□□□ -1.69
CDC42-IT1-201ENST00000431803 NAA38Q9BRA0 125 aaKnown RBP4.48□□□□□ -1.69
CDC42-IT1-201ENST00000431803 C14orf132Q9NPU4 83 aa4.47□□□□□ -1.69
CDC42-IT1-201ENST00000431803 MMP24-AS1A0A0U1RRL7 71 aa4.46□□□□□ -1.7
CDC42-IT1-201ENST00000431803 M0R143 59 aa4.46□□□□□ -1.7
CDC42-IT1-201ENST00000431803 LINC00846Q9NV44 126 aa4.46□□□□□ -1.7
CDC42-IT1-201ENST00000431803 TMEM254Q8TBM7 123 aa4.45□□□□□ -1.7
CDC42-IT1-201ENST00000431803 MRPL34Q9BQ48 92 aaKnown RBP4.45□□□□□ -1.7
CDC42-IT1-201ENST00000431803 NREPQ16612 68 aa4.44□□□□□ -1.7
CDC42-IT1-201ENST00000431803 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
CDC42-IT1-201ENST00000431803 hDV103S1A0JD37 113 aa4.42□□□□□ -1.7
CDC42-IT1-201ENST00000431803 K7EQZ3 153 aa4.42□□□□□ -1.7
CDC42-IT1-201ENST00000431803 MT3P25713 68 aa4.4□□□□□ -1.71
CDC42-IT1-201ENST00000431803 LOC105371267A0A1B0GV96 52 aa4.39□□□□□ -1.71
CDC42-IT1-201ENST00000431803 NDUFS5O43920 106 aa4.39□□□□□ -1.71
CDC42-IT1-201ENST00000431803 Q5W150 140 aa4.38□□□□□ -1.71
CDC42-IT1-201ENST00000431803 C7orf65Q6ZTY9 151 aa4.38□□□□□ -1.71
CDC42-IT1-201ENST00000431803 H3BT86 120 aa4.37□□□□□ -1.71
CDC42-IT1-201ENST00000431803 SMIM6P0DI80 62 aa4.37□□□□□ -1.71
CDC42-IT1-201ENST00000431803 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
CDC42-IT1-201ENST00000431803 BPY2O14599 106 aa4.36□□□□□ -1.71
CDC42-IT1-201ENST00000431803 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
CDC42-IT1-201ENST00000431803 BATFQ16520 125 aa4.33□□□□□ -1.72
CDC42-IT1-201ENST00000431803 Q8N9L7 120 aa4.33□□□□□ -1.72
CDC42-IT1-201ENST00000431803 A0A1W2PPM0 123 aa4.32□□□□□ -1.72
CDC42-IT1-201ENST00000431803 TSTD3H0UI37 97 aa4.32□□□□□ -1.72
CDC42-IT1-201ENST00000431803 C4orf26Q17RF5 130 aa4.32□□□□□ -1.72
CDC42-IT1-201ENST00000431803 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms