RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 RNF17Q9BXT8 1623 aaKnown RBP-1.01□□□□□ -2.57
CDC40-204ENST00000431461 RICTORQ6R327 1708 aa-1.01□□□□□ -2.57
CDC40-204ENST00000431461 TOGARAM1Q9Y4F4 1720 aa-1.01□□□□□ -2.57
CDC40-204ENST00000431461 APOBP04114 4563 aaKnown RBP-1.01□□□□□ -2.57
CDC40-204ENST00000431461 LAMA2P24043 3122 aaKnown RBP-1.02□□□□□ -2.57
CDC40-204ENST00000431461 NOP10Q9NPE3 64 aaKnown RBP-1.02□□□□□ -2.57
CDC40-204ENST00000431461 TRIOO75962 3097 aa-1.02□□□□□ -2.57
CDC40-204ENST00000431461 WDR87Q6ZQQ6 2873 aa-1.02□□□□□ -2.57
CDC40-204ENST00000431461 TJP1Q07157 1748 aa-1.03□□□□□ -2.57
CDC40-204ENST00000431461 PARP4Q9UKK3 1724 aaKnown RBP-1.03□□□□□ -2.57
CDC40-204ENST00000431461 ITSN2Q9NZM3 1697 aa-1.03□□□□□ -2.57
CDC40-204ENST00000431461 IGLV5-48A0A075B6I7 105 aa-1.03□□□□□ -2.57
CDC40-204ENST00000431461 DCAF1Q9Y4B6 1507 aa-1.04□□□□□ -2.58
CDC40-204ENST00000431461 ANKARQ7Z5J8 1434 aa-1.04□□□□□ -2.58
CDC40-204ENST00000431461 MINOS1Q5TGZ0 78 aa-1.04□□□□□ -2.58
CDC40-204ENST00000431461 NRAPQ86VF7 1730 aa-1.04□□□□□ -2.58
CDC40-204ENST00000431461 DNAH2Q9P225 4427 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 A0A0C4DFX4 3053 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 RELNP78509 3460 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 DNAH1Q9P2D7 4330 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 ETDCA0A1B0GVM5 59 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 H3BUT2 72 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 CRIP1P50238 77 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 GNG2P59768 71 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 RYR1P21817 5038 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 KIF1AQ12756 1690 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 BIRC6Q9NR09 4857 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.05□□□□□ -2.58
CDC40-204ENST00000431461 RYR3Q15413 4870 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 LAMA3Q16787 3333 aa-1.05□□□□□ -2.58
CDC40-204ENST00000431461 DEFB114Q30KQ6 69 aa-1.06□□□□□ -2.58
CDC40-204ENST00000431461 RB1CC1Q8TDY2 1594 aa-1.06□□□□□ -2.58
CDC40-204ENST00000431461 CFAP74Q9C0B2 1584 aa-1.06□□□□□ -2.58
CDC40-204ENST00000431461 RANBP2P49792 3224 aaKnown RBP-1.07□□□□□ -2.58
CDC40-204ENST00000431461 LRRIQ1Q96JM4 1722 aa-1.07□□□□□ -2.58
CDC40-204ENST00000431461 NHSQ6T4R5 1651 aa-1.07□□□□□ -2.58
CDC40-204ENST00000431461 HYDINQ4G0P3 5121 aa-1.07□□□□□ -2.58
CDC40-204ENST00000431461 RPS27P42677 84 aaKnown RBP-1.08□□□□□ -2.58
CDC40-204ENST00000431461 MT1XP80297 61 aa-1.08□□□□□ -2.58
CDC40-204ENST00000431461 RPS27LQ71UM5 84 aaKnown RBP-1.08□□□□□ -2.58
CDC40-204ENST00000431461 CD163L1Q9NR16 1453 aa-1.08□□□□□ -2.58
CDC40-204ENST00000431461 NIPBLQ6KC79 2804 aaeCLIP-1.08□□□□□ -2.58
CDC40-204ENST00000431461 TEX15Q9BXT5 2789 aa-1.08□□□□□ -2.58
CDC40-204ENST00000431461 TLN2Q9Y4G6 2542 aa-1.09□□□□□ -2.58
CDC40-204ENST00000431461 LMTK2Q8IWU2 1503 aa-1.09□□□□□ -2.58
CDC40-204ENST00000431461 MED14O60244 1454 aa-1.09□□□□□ -2.58
CDC40-204ENST00000431461 CCDC18Q5T9S5 1454 aa-1.09□□□□□ -2.58
CDC40-204ENST00000431461 ENHOQ6UWT2 76 aa-1.09□□□□□ -2.58
CDC40-204ENST00000431461 KRTAP8-1Q8IUC2 63 aa-1.09□□□□□ -2.58
CDC40-204ENST00000431461 C6orf48Q9UBA6 75 aa-1.09□□□□□ -2.58
CDC40-204ENST00000431461 FRYQ5TBA9 3013 aa-1.1□□□□□ -2.58
CDC40-204ENST00000431461 PLECQ15149 4684 aaKnown RBP-1.1□□□□□ -2.59
CDC40-204ENST00000431461 C18orf32Q8TCD1 76 aa-1.1□□□□□ -2.59
CDC40-204ENST00000431461 SACSQ9NZJ4 4579 aa-1.1□□□□□ -2.59
CDC40-204ENST00000431461 ERVK-7P63135 1459 aa-1.11□□□□□ -2.59
CDC40-204ENST00000431461 RIF1Q5UIP0 2472 aaKnown RBP-1.11□□□□□ -2.59
CDC40-204ENST00000431461 CDC42BPAQ5VT25 1732 aa-1.11□□□□□ -2.59
CDC40-204ENST00000431461 SMR3BP02814 79 aaPredicted RBP-1.11□□□□□ -2.59
CDC40-204ENST00000431461 LY75O60449 1722 aa-1.12□□□□□ -2.59
CDC40-204ENST00000431461 BPTFQ12830 3046 aa-1.13□□□□□ -2.59
CDC40-204ENST00000431461 MT1EP04732 61 aa-1.13□□□□□ -2.59
CDC40-204ENST00000431461 COL12A1Q99715 3063 aa-1.13□□□□□ -2.59
CDC40-204ENST00000431461 USP9XQ93008 2570 aaPredicted RBP-1.14□□□□□ -2.59
CDC40-204ENST00000431461 FCER1GP30273 86 aa-1.14□□□□□ -2.59
CDC40-204ENST00000431461 MYO5CQ9NQX4 1742 aa-1.15□□□□□ -2.59
CDC40-204ENST00000431461 DNHD1Q96M86 4753 aa-1.15□□□□□ -2.59
CDC40-204ENST00000431461 H3BVH4 76 aa-1.15□□□□□ -2.59
CDC40-204ENST00000431461 M0QZ58 72 aa-1.15□□□□□ -2.59
CDC40-204ENST00000431461 ITPR1Q14643 2758 aa-1.15□□□□□ -2.59
CDC40-204ENST00000431461 MROH1Q8NDA8 1641 aa-1.15□□□□□ -2.59
CDC40-204ENST00000431461 KIAA1109Q2LD37 5005 aa-1.15□□□□□ -2.59
CDC40-204ENST00000431461 DNAH8Q96JB1 4490 aa-1.16□□□□□ -2.59
CDC40-204ENST00000431461 CMYA5Q8N3K9 4069 aa-1.16□□□□□ -2.6
CDC40-204ENST00000431461 C3P01024 1663 aa-1.16□□□□□ -2.6
CDC40-204ENST00000431461 DNMBPQ6XZF7 1577 aa-1.17□□□□□ -2.6
CDC40-204ENST00000431461 A8MTW9 85 aa-1.17□□□□□ -2.6
CDC40-204ENST00000431461 MT1HL1P0DM35 61 aa-1.17□□□□□ -2.6
CDC40-204ENST00000431461 ATXN8Q156A1 80 aa-1.17□□□□□ -2.6
CDC40-204ENST00000431461 ABCC6O95255 1503 aa-1.17□□□□□ -2.6
CDC40-204ENST00000431461 CLASP1Q7Z460 1538 aa-1.17□□□□□ -2.6
CDC40-204ENST00000431461 M0QY20 66 aa-1.18□□□□□ -2.6
CDC40-204ENST00000431461 MT1LQ93083 61 aa-1.18□□□□□ -2.6
CDC40-204ENST00000431461 RRBP1Q9P2E9 1410 aaKnown RBP-1.18□□□□□ -2.6
CDC40-204ENST00000431461 DIP2AQ14689 1571 aa-1.18□□□□□ -2.6
CDC40-204ENST00000431461 MAST1Q9Y2H9 1570 aa-1.18□□□□□ -2.6
CDC40-204ENST00000431461 RNF213Q63HN8 5207 aa-1.19□□□□□ -2.6
CDC40-204ENST00000431461 C5orf42Q9H799 3197 aa-1.19□□□□□ -2.6
CDC40-204ENST00000431461 K7EMI3 77 aa-1.19□□□□□ -2.6
CDC40-204ENST00000431461 ABCA8O94911 1581 aa-1.2□□□□□ -2.6
CDC40-204ENST00000431461 CDC42BPGQ6DT37 1551 aa-1.2□□□□□ -2.6
CDC40-204ENST00000431461 SPENQ96T58 3664 aaKnown RBP-1.2□□□□□ -2.6
CDC40-204ENST00000431461 DNAH7Q8WXX0 4024 aa-1.21□□□□□ -2.6
CDC40-204ENST00000431461 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.21□□□□□ -2.6
CDC40-204ENST00000431461 MADDQ8WXG6 1647 aa-1.22□□□□□ -2.6
CDC40-204ENST00000431461 SFTA3P0C7M3 94 aa-1.22□□□□□ -2.6
CDC40-204ENST00000431461 LINC01546A6NGU7 62 aa-1.23□□□□□ -2.61
CDC40-204ENST00000431461 NCBP2-AS2Q69YL0 99 aa-1.23□□□□□ -2.61
CDC40-204ENST00000431461 SMARCA2P51531 1590 aa-1.24□□□□□ -2.61
CDC40-204ENST00000431461 CELSR3Q9NYQ7 3312 aa-1.24□□□□□ -2.61
CDC40-204ENST00000431461 ABRACLQ9P1F3 81 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms