RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
SYNPO2-202ENST00000429713 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
SYNPO2-202ENST00000429713 RTL8CO15255 209 aa4.71□□□□□ -1.66
SYNPO2-202ENST00000429713 A0A0G2JQZ4 141 aa4.69□□□□□ -1.66
SYNPO2-202ENST00000429713 A0A1W2PNN7 141 aa4.69□□□□□ -1.66
SYNPO2-202ENST00000429713 KRTAP10-3P60369 221 aa4.69□□□□□ -1.66
SYNPO2-202ENST00000429713 PLAC8Q9NZF1 115 aa4.69□□□□□ -1.66
SYNPO2-202ENST00000429713 SPACA4Q8TDM5 124 aa4.68□□□□□ -1.66
SYNPO2-202ENST00000429713 KRTAP10-11P60412 298 aa4.67□□□□□ -1.66
SYNPO2-202ENST00000429713 NBDYA0A0U1RRE5 68 aa4.66□□□□□ -1.66
SYNPO2-202ENST00000429713 KRTAP24-1Q3LI83 254 aa4.66□□□□□ -1.66
SYNPO2-202ENST00000429713 Q8NDZ9 215 aa4.65□□□□□ -1.66
SYNPO2-202ENST00000429713 KRTAP1-3Q8IUG1 177 aa4.65□□□□□ -1.67
SYNPO2-202ENST00000429713 ZNF861PO60384 105 aa4.65□□□□□ -1.67
SYNPO2-202ENST00000429713 KRTAP4-16G5E9R7 235 aaPredicted RBP4.64□□□□□ -1.67
SYNPO2-202ENST00000429713 WWC2-AS2Q96NR7 200 aa4.64□□□□□ -1.67
SYNPO2-202ENST00000429713 RPL37P61927 97 aaKnown RBP4.63□□□□□ -1.67
SYNPO2-202ENST00000429713 LINC00483Q53H64 154 aa4.63□□□□□ -1.67
SYNPO2-202ENST00000429713 TRRAPQ9Y4A5 3859 aa4.62□□□□□ -1.67
SYNPO2-202ENST00000429713 Q96NJ1 140 aa4.62□□□□□ -1.67
SYNPO2-202ENST00000429713 TYMSOSQ8TAI1 123 aa4.61□□□□□ -1.67
SYNPO2-202ENST00000429713 CASC10Q5T4H9 136 aa4.59□□□□□ -1.67
SYNPO2-202ENST00000429713 Q5W150 140 aa4.58□□□□□ -1.68
SYNPO2-202ENST00000429713 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
SYNPO2-202ENST00000429713 KRTAP1-1Q07627 177 aa4.56□□□□□ -1.68
SYNPO2-202ENST00000429713 VWFP04275 2813 aa4.56□□□□□ -1.68
SYNPO2-202ENST00000429713 K7EIL1 84 aa4.56□□□□□ -1.68
SYNPO2-202ENST00000429713 PSORS1C2Q9UIG4 136 aa4.56□□□□□ -1.68
SYNPO2-202ENST00000429713 H1FX-AS1Q4G0G2 97 aa4.55□□□□□ -1.68
SYNPO2-202ENST00000429713 CSMD3Q7Z407 3707 aa4.55□□□□□ -1.68
SYNPO2-202ENST00000429713 A0A087WTM6 91 aa4.52□□□□□ -1.69
SYNPO2-202ENST00000429713 PANO1I0J062 215 aa4.52□□□□□ -1.69
SYNPO2-202ENST00000429713 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
SYNPO2-202ENST00000429713 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
SYNPO2-202ENST00000429713 A8MUU9 505 aa4.5□□□□□ -1.69
SYNPO2-202ENST00000429713 RPS29P62273 56 aaKnown RBP4.5□□□□□ -1.69
SYNPO2-202ENST00000429713 APLNQ9ULZ1 77 aa4.48□□□□□ -1.69
SYNPO2-202ENST00000429713 KRTAP11-1Q8IUC1 163 aa4.48□□□□□ -1.69
SYNPO2-202ENST00000429713 PKD1L1Q8TDX9 2849 aa4.48□□□□□ -1.69
SYNPO2-202ENST00000429713 LINC00304Q8N9R0 145 aa4.47□□□□□ -1.69
SYNPO2-202ENST00000429713 M0QZ58 72 aa4.46□□□□□ -1.7
SYNPO2-202ENST00000429713 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
SYNPO2-202ENST00000429713 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
SYNPO2-202ENST00000429713 FBN1P35555 2871 aaKnown RBP4.45□□□□□ -1.7
SYNPO2-202ENST00000429713 Q8N1X5 172 aa4.45□□□□□ -1.7
SYNPO2-202ENST00000429713 J3QL48 77 aa4.44□□□□□ -1.7
SYNPO2-202ENST00000429713 TENM4Q6N022 2769 aa4.44□□□□□ -1.7
SYNPO2-202ENST00000429713 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.43□□□□□ -1.7
SYNPO2-202ENST00000429713 ANK2Q01484 3957 aa4.4□□□□□ -1.7
SYNPO2-202ENST00000429713 PLAC4Q8WY50 150 aa4.37□□□□□ -1.71
SYNPO2-202ENST00000429713 A0A0D9SG42 100 aa4.37□□□□□ -1.71
SYNPO2-202ENST00000429713 A8MU10 97 aa4.37□□□□□ -1.71
SYNPO2-202ENST00000429713 ADM2Q7Z4H4 148 aa4.36□□□□□ -1.71
SYNPO2-202ENST00000429713 KRTAP1-5Q9BYS1 174 aa4.35□□□□□ -1.71
SYNPO2-202ENST00000429713 TENM2Q9NT68 2774 aa4.35□□□□□ -1.71
SYNPO2-202ENST00000429713 OTOGQ6ZRI0 2925 aa4.33□□□□□ -1.72
SYNPO2-202ENST00000429713 SMR3BP02814 79 aaPredicted RBP4.32□□□□□ -1.72
SYNPO2-202ENST00000429713 ANK3Q12955 4377 aaKnown RBP4.31□□□□□ -1.72
SYNPO2-202ENST00000429713 LYSTQ99698 3801 aa4.31□□□□□ -1.72
SYNPO2-202ENST00000429713 CMYA5Q8N3K9 4069 aa4.3□□□□□ -1.72
SYNPO2-202ENST00000429713 S4R3F8 94 aa4.3□□□□□ -1.72
SYNPO2-202ENST00000429713 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
SYNPO2-202ENST00000429713 FRAS1Q86XX4 4008 aa4.3□□□□□ -1.72
SYNPO2-202ENST00000429713 P0C880 135 aa4.29□□□□□ -1.72
SYNPO2-202ENST00000429713 KRTAP21-3Q3LHN1 58 aa4.28□□□□□ -1.72
SYNPO2-202ENST00000429713 KRTAP7-1Q8IUC3 87 aa4.26□□□□□ -1.73
SYNPO2-202ENST00000429713 COL7A1Q02388 2944 aa4.25□□□□□ -1.73
SYNPO2-202ENST00000429713 Q6ZSA8 131 aa4.24□□□□□ -1.73
SYNPO2-202ENST00000429713 H0YAA0 97 aa4.23□□□□□ -1.73
SYNPO2-202ENST00000429713 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.73
SYNPO2-202ENST00000429713 R4GN34 69 aa4.21□□□□□ -1.73
SYNPO2-202ENST00000429713 MEGF8Q7Z7M0 2845 aa4.17□□□□□ -1.74
SYNPO2-202ENST00000429713 KRTAP10-2P60368 255 aa4.15□□□□□ -1.74
SYNPO2-202ENST00000429713 DNAH7Q8WXX0 4024 aa4.15□□□□□ -1.75
SYNPO2-202ENST00000429713 Q6ZRN7 208 aaPredicted RBP4.14□□□□□ -1.75
SYNPO2-202ENST00000429713 INE1O15225 51 aa4.14□□□□□ -1.75
SYNPO2-202ENST00000429713 TNP1P09430 55 aa4.14□□□□□ -1.75
SYNPO2-202ENST00000429713 KRTAP10-1P60331 282 aa4.13□□□□□ -1.75
SYNPO2-202ENST00000429713 HECTD4Q9Y4D8 3996 aa4.12□□□□□ -1.75
SYNPO2-202ENST00000429713 ALMS1Q8TCU4 4167 aa4.1□□□□□ -1.75
SYNPO2-202ENST00000429713 KMT2AQ03164 3969 aa4.09□□□□□ -1.75
SYNPO2-202ENST00000429713 FBN3Q75N90 2809 aa4.09□□□□□ -1.76
SYNPO2-202ENST00000429713 DNAH3Q8TD57 4116 aa4.08□□□□□ -1.76
SYNPO2-202ENST00000429713 KRTAP13-2Q52LG2 175 aa4.05□□□□□ -1.76
SYNPO2-202ENST00000429713 HUWE1Q7Z6Z7 4374 aaKnown RBP4.04□□□□□ -1.76
SYNPO2-202ENST00000429713 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
SYNPO2-202ENST00000429713 M0R2T5 61 aa4.02□□□□□ -1.77
SYNPO2-202ENST00000429713 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
SYNPO2-202ENST00000429713 Q5VSD8 79 aa4□□□□□ -1.77
SYNPO2-202ENST00000429713 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
SYNPO2-202ENST00000429713 VPS13BQ7Z7G8 4022 aa3.97□□□□□ -1.77
SYNPO2-202ENST00000429713 DNAH10Q8IVF4 4471 aa3.92□□□□□ -1.78
SYNPO2-202ENST00000429713 XP32Q5T750 250 aa3.9□□□□□ -1.78
SYNPO2-202ENST00000429713 C10orf95Q9H7T3 257 aa3.9□□□□□ -1.79
SYNPO2-202ENST00000429713 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
SYNPO2-202ENST00000429713 PRKDCP78527 4128 aaKnown RBP3.89□□□□□ -1.79
SYNPO2-202ENST00000429713 KRTAP1-4P0C5Y4 121 aa3.88□□□□□ -1.79
SYNPO2-202ENST00000429713 TPRXLQ17RH7 258 aa3.86□□□□□ -1.79
SYNPO2-202ENST00000429713 DNAH6Q9C0G6 4158 aa3.86□□□□□ -1.79
SYNPO2-202ENST00000429713 DNAH9Q9NYC9 4486 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 267.7 ms