RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 FAM168BA1KXE4 195 aa7.06□□□□□ -1.28
CECR3-201ENST00000428828 EPPK1P58107 5090 aaKnown RBP7.06□□□□□ -1.28
CECR3-201ENST00000428828 DYNC1H1Q14204 4646 aaKnown RBP7.05□□□□□ -1.28
CECR3-201ENST00000428828 CASC2Q6XLA1 102 aa7.05□□□□□ -1.28
CECR3-201ENST00000428828 SPACA4Q8TDM5 124 aa7.05□□□□□ -1.28
CECR3-201ENST00000428828 C7orf33Q8WU49 177 aa7.05□□□□□ -1.28
CECR3-201ENST00000428828 IGLV5-37A0A075B6J1 123 aa7.03□□□□□ -1.28
CECR3-201ENST00000428828 SERTAD4-AS1Q5TG53 156 aa7.03□□□□□ -1.28
CECR3-201ENST00000428828 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
CECR3-201ENST00000428828 IGLV8-61A0A075B6I0 122 aa7.02□□□□□ -1.29
CECR3-201ENST00000428828 A0A1W2PNN7 141 aa7.02□□□□□ -1.29
CECR3-201ENST00000428828 WFDC13Q8IUB5 93 aa7.02□□□□□ -1.29
CECR3-201ENST00000428828 DNAH8Q96JB1 4490 aa7.01□□□□□ -1.29
CECR3-201ENST00000428828 PLA2G1BP04054 148 aaKnown RBP7.01□□□□□ -1.29
CECR3-201ENST00000428828 Q6ZSA8 131 aa7.01□□□□□ -1.29
CECR3-201ENST00000428828 LINC01554Q52M75 96 aa7□□□□□ -1.29
CECR3-201ENST00000428828 KRTAP7-1Q8IUC3 87 aa7□□□□□ -1.29
CECR3-201ENST00000428828 LINC00313P59037 77 aa6.99□□□□□ -1.29
CECR3-201ENST00000428828 CIRBP-AS1Q8TBR5 109 aa6.99□□□□□ -1.29
CECR3-201ENST00000428828 H3BS24 57 aa6.99□□□□□ -1.29
CECR3-201ENST00000428828 IGLV1-50A0A075B6I6 118 aa6.97□□□□□ -1.29
CECR3-201ENST00000428828 RPL37AP8A6NKH3 93 aa6.97□□□□□ -1.29
CECR3-201ENST00000428828 A8MWP4 228 aa6.97□□□□□ -1.29
CECR3-201ENST00000428828 SPINK7P58062 85 aa6.97□□□□□ -1.29
CECR3-201ENST00000428828 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.3
CECR3-201ENST00000428828 IGFL1Q6UW32 110 aa6.95□□□□□ -1.3
CECR3-201ENST00000428828 DEFB116Q30KQ4 102 aa6.95□□□□□ -1.3
CECR3-201ENST00000428828 SPAG11AQ6PDA7 123 aa6.95□□□□□ -1.3
CECR3-201ENST00000428828 TP53AIP1Q9HCN2 124 aa6.95□□□□□ -1.3
CECR3-201ENST00000428828 SMR3BP02814 79 aaPredicted RBP6.93□□□□□ -1.3
CECR3-201ENST00000428828 A0A087WSZ3 146 aa6.91□□□□□ -1.3
CECR3-201ENST00000428828 KRTAP11-1Q8IUC1 163 aa6.91□□□□□ -1.3
CECR3-201ENST00000428828 LINC00472Q9H8W2 130 aa6.9□□□□□ -1.3
CECR3-201ENST00000428828 KIAA1109Q2LD37 5005 aa6.9□□□□□ -1.31
CECR3-201ENST00000428828 CDK2AP2O75956 126 aa6.89□□□□□ -1.31
CECR3-201ENST00000428828 HRES1P13985 223 aa6.88□□□□□ -1.31
CECR3-201ENST00000428828 MMP24-AS1A0A0U1RRL7 71 aa6.88□□□□□ -1.31
CECR3-201ENST00000428828 PSORS1C2Q9UIG4 136 aa6.88□□□□□ -1.31
CECR3-201ENST00000428828 RPL37AP61513 92 aaKnown RBP6.87□□□□□ -1.31
CECR3-201ENST00000428828 RYR1P21817 5038 aa6.87□□□□□ -1.31
CECR3-201ENST00000428828 REG3GQ6UW15 175 aa6.86□□□□□ -1.31
CECR3-201ENST00000428828 PRAC1Q96KF2 57 aa6.86□□□□□ -1.31
CECR3-201ENST00000428828 HSPG2P98160 4391 aa6.85□□□□□ -1.31
CECR3-201ENST00000428828 PRR26Q8N8Z3 221 aa6.85□□□□□ -1.31
CECR3-201ENST00000428828 BIRC6Q9NR09 4857 aa6.84□□□□□ -1.31
CECR3-201ENST00000428828 SPRR1BP22528 89 aa6.83□□□□□ -1.32
CECR3-201ENST00000428828 PRLHP81277 87 aa6.83□□□□□ -1.32
CECR3-201ENST00000428828 SPATA8Q6RVD6 105 aa6.83□□□□□ -1.32
CECR3-201ENST00000428828 FAT1Q14517 4588 aa6.83□□□□□ -1.32
CECR3-201ENST00000428828 PCOTHQ58A44 107 aa6.82□□□□□ -1.32
CECR3-201ENST00000428828 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
CECR3-201ENST00000428828 Q5VSD8 79 aa6.81□□□□□ -1.32
CECR3-201ENST00000428828 VPS13BQ7Z7G8 4022 aa6.81□□□□□ -1.32
CECR3-201ENST00000428828 KRTAP17-1Q9BYP8 105 aa6.8□□□□□ -1.32
CECR3-201ENST00000428828 SRRM2Q9UQ35 2752 aaKnown RBP6.79□□□□□ -1.32
CECR3-201ENST00000428828 IGLV7-43P04211 117 aa6.79□□□□□ -1.32
CECR3-201ENST00000428828 RETNLBQ9BQ08 111 aa6.78□□□□□ -1.32
CECR3-201ENST00000428828 ADM2Q7Z4H4 148 aa6.78□□□□□ -1.32
CECR3-201ENST00000428828 A0A0G2JQZ4 141 aa6.77□□□□□ -1.33
CECR3-201ENST00000428828 Q8N1X5 172 aa6.77□□□□□ -1.33
CECR3-201ENST00000428828 H0Y9J4 135 aa6.76□□□□□ -1.33
CECR3-201ENST00000428828 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
CECR3-201ENST00000428828 ZNF861PO60384 105 aa6.75□□□□□ -1.33
CECR3-201ENST00000428828 KRTAP13-1Q8IUC0 172 aa6.75□□□□□ -1.33
CECR3-201ENST00000428828 ACYP2P14621 99 aa6.74□□□□□ -1.33
CECR3-201ENST00000428828 C8orf17Q9NRJ1 99 aa6.73□□□□□ -1.33
CECR3-201ENST00000428828 KRTAP4-5Q9BYR2 181 aa6.7□□□□□ -1.34
CECR3-201ENST00000428828 SPINK6Q6UWN8 80 aa6.7□□□□□ -1.34
CECR3-201ENST00000428828 HERC2O95714 4834 aa6.69□□□□□ -1.34
CECR3-201ENST00000428828 UQCR11O14957 56 aa6.69□□□□□ -1.34
CECR3-201ENST00000428828 Q96NJ1 140 aa6.69□□□□□ -1.34
CECR3-201ENST00000428828 A0A1B0GU69 56 aa6.68□□□□□ -1.34
CECR3-201ENST00000428828 MIR22HGQ0VDD5 57 aa6.68□□□□□ -1.34
CECR3-201ENST00000428828 MRPL34Q9BQ48 92 aaKnown RBP6.68□□□□□ -1.34
CECR3-201ENST00000428828 PKHD1L1Q86WI1 4243 aa6.67□□□□□ -1.34
CECR3-201ENST00000428828 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
CECR3-201ENST00000428828 ANAPC11Q9NYG5 84 aa6.67□□□□□ -1.34
CECR3-201ENST00000428828 A0A1B0GVX0 72 aa6.66□□□□□ -1.34
CECR3-201ENST00000428828 CSAG1Q6PB30 78 aa6.66□□□□□ -1.34
CECR3-201ENST00000428828 ZNF706Q9Y5V0 76 aaPredicted RBP6.65□□□□□ -1.34
CECR3-201ENST00000428828 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
CECR3-201ENST00000428828 FLG2Q5D862 2391 aaPredicted RBP6.63□□□□□ -1.35
CECR3-201ENST00000428828 ABCA13Q86UQ4 5058 aa6.63□□□□□ -1.35
CECR3-201ENST00000428828 KRTAP1-4P0C5Y4 121 aa6.62□□□□□ -1.35
CECR3-201ENST00000428828 IGLV9-49A0A0B4J1Y8 123 aa6.6□□□□□ -1.35
CECR3-201ENST00000428828 LINC00483Q53H64 154 aa6.59□□□□□ -1.35
CECR3-201ENST00000428828 LRP1Q07954 4544 aaKnown RBP6.59□□□□□ -1.35
CECR3-201ENST00000428828 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
CECR3-201ENST00000428828 IGHV6-1A0A0B4J1U7 121 aa6.58□□□□□ -1.36
CECR3-201ENST00000428828 FAT3Q8TDW7 4589 aa6.56□□□□□ -1.36
CECR3-201ENST00000428828 KRTAP13-2Q52LG2 175 aa6.56□□□□□ -1.36
CECR3-201ENST00000428828 ROMO1P60602 79 aa6.54□□□□□ -1.36
CECR3-201ENST00000428828 TYMSOSQ8TAI1 123 aa6.53□□□□□ -1.36
CECR3-201ENST00000428828 PCLOQ9Y6V0 5065 aa6.52□□□□□ -1.37
CECR3-201ENST00000428828 Q5W150 140 aa6.52□□□□□ -1.37
CECR3-201ENST00000428828 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
CECR3-201ENST00000428828 TNXBP22105 4242 aa6.47□□□□□ -1.37
CECR3-201ENST00000428828 MT1HL1P0DM35 61 aa6.46□□□□□ -1.37
CECR3-201ENST00000428828 KRTAP10-8P60410 259 aa6.46□□□□□ -1.37
CECR3-201ENST00000428828 J3QL48 77 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms