RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 NCR3O14931 201 aa1.75□□□□□ -2.13
CCDC30-203ENST00000428554 IGFL1Q6UW32 110 aa1.75□□□□□ -2.13
CCDC30-203ENST00000428554 KNTC1P50748 2209 aa1.75□□□□□ -2.13
CCDC30-203ENST00000428554 LY6G6CO95867 125 aa1.75□□□□□ -2.13
CCDC30-203ENST00000428554 KRTAP10-5P60370 271 aa1.75□□□□□ -2.13
CCDC30-203ENST00000428554 Q6ZQY7 126 aa1.75□□□□□ -2.13
CCDC30-203ENST00000428554 CCL19Q99731 98 aa1.75□□□□□ -2.13
CCDC30-203ENST00000428554 GVQW2A0A096LPI5 108 aaPredicted RBP1.74□□□□□ -2.13
CCDC30-203ENST00000428554 PLAC4Q8WY50 150 aa1.74□□□□□ -2.13
CCDC30-203ENST00000428554 SEC16AO15027 2179 aa1.74□□□□□ -2.13
CCDC30-203ENST00000428554 RP1P56715 2156 aa1.74□□□□□ -2.13
CCDC30-203ENST00000428554 SRRM2Q9UQ35 2752 aaKnown RBP1.74□□□□□ -2.13
CCDC30-203ENST00000428554 IGKV2-24A0A0C4DH68 120 aa1.74□□□□□ -2.13
CCDC30-203ENST00000428554 PIN1P1O15428 100 aa1.74□□□□□ -2.13
CCDC30-203ENST00000428554 M0R1W7 72 aa1.73□□□□□ -2.13
CCDC30-203ENST00000428554 UNC13CQ8NB66 2214 aa1.73□□□□□ -2.13
CCDC30-203ENST00000428554 SMIM11BQ8TCY0 68 aa1.73□□□□□ -2.13
CCDC30-203ENST00000428554 ABCA1O95477 2261 aa1.73□□□□□ -2.13
CCDC30-203ENST00000428554 DNAJC13O75165 2243 aa1.72□□□□□ -2.13
CCDC30-203ENST00000428554 PP632Q6XCG6 107 aa1.72□□□□□ -2.13
CCDC30-203ENST00000428554 Q6ZRX8 168 aa1.72□□□□□ -2.13
CCDC30-203ENST00000428554 CPSF4LA6NMK7 179 aaKnown RBP1.71□□□□□ -2.14
CCDC30-203ENST00000428554 KMT2AQ03164 3969 aa1.71□□□□□ -2.14
CCDC30-203ENST00000428554 FRAS1Q86XX4 4008 aa1.71□□□□□ -2.14
CCDC30-203ENST00000428554 ETDCA0A1B0GVM5 59 aa1.71□□□□□ -2.14
CCDC30-203ENST00000428554 KRTAP10-3P60369 221 aa1.71□□□□□ -2.14
CCDC30-203ENST00000428554 UNQ6190/PRO20217Q6UXQ8 127 aa1.71□□□□□ -2.14
CCDC30-203ENST00000428554 ARL14EPLP0DKL9 152 aa1.7□□□□□ -2.14
CCDC30-203ENST00000428554 DOCK10Q96BY6 2186 aa1.7□□□□□ -2.14
CCDC30-203ENST00000428554 PKHD1P08F94 4074 aa1.7□□□□□ -2.14
CCDC30-203ENST00000428554 CADP27708 2225 aa1.7□□□□□ -2.14
CCDC30-203ENST00000428554 ALPK2Q86TB3 2170 aa1.69□□□□□ -2.14
CCDC30-203ENST00000428554 LYSTQ99698 3801 aa1.69□□□□□ -2.14
CCDC30-203ENST00000428554 MACF1Q9UPN3 7388 aaKnown RBP1.69□□□□□ -2.14
CCDC30-203ENST00000428554 DEFB131BA0A096LNP1 70 aa1.69□□□□□ -2.14
CCDC30-203ENST00000428554 H0YGX0 51 aa1.68□□□□□ -2.14
CCDC30-203ENST00000428554 LCE3EQ5T5B0 92 aa1.68□□□□□ -2.14
CCDC30-203ENST00000428554 LINC00575Q6W349 94 aa1.68□□□□□ -2.14
CCDC30-203ENST00000428554 SPRR5A0A1B0GTR4 108 aa1.68□□□□□ -2.14
CCDC30-203ENST00000428554 SPINK13Q1W4C9 94 aa1.68□□□□□ -2.14
CCDC30-203ENST00000428554 ROS1P08922 2347 aa1.67□□□□□ -2.14
CCDC30-203ENST00000428554 ANGP03950 147 aaKnown RBP1.67□□□□□ -2.14
CCDC30-203ENST00000428554 ANK3Q12955 4377 aaKnown RBP1.67□□□□□ -2.14
CCDC30-203ENST00000428554 RPL38P63173 70 aaKnown RBP1.66□□□□□ -2.14
CCDC30-203ENST00000428554 CACNA1CQ13936 2221 aa1.66□□□□□ -2.14
CCDC30-203ENST00000428554 OBSCNQ5VST9 7968 aa1.66□□□□□ -2.14
CCDC30-203ENST00000428554 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
CCDC30-203ENST00000428554 RPL37P61927 97 aaKnown RBP1.65□□□□□ -2.14
CCDC30-203ENST00000428554 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.15
CCDC30-203ENST00000428554 MRPL33O75394 65 aaKnown RBP1.65□□□□□ -2.15
CCDC30-203ENST00000428554 LELP1Q5T871 98 aa1.65□□□□□ -2.15
CCDC30-203ENST00000428554 KRTAP9-6A8MVA2 160 aa1.64□□□□□ -2.15
CCDC30-203ENST00000428554 FAT3Q8TDW7 4589 aa1.64□□□□□ -2.15
CCDC30-203ENST00000428554 HAMPP81172 84 aa1.63□□□□□ -2.15
CCDC30-203ENST00000428554 SSBP3-AS1Q7Z2R9 100 aa1.63□□□□□ -2.15
CCDC30-203ENST00000428554 PLCE1Q9P212 2302 aa1.63□□□□□ -2.15
CCDC30-203ENST00000428554 CSMD3Q7Z407 3707 aa1.63□□□□□ -2.15
CCDC30-203ENST00000428554 SPINK4O60575 86 aa1.63□□□□□ -2.15
CCDC30-203ENST00000428554 WNK2Q9Y3S1 2297 aa1.62□□□□□ -2.15
CCDC30-203ENST00000428554 KRTAP10-1P60331 282 aa1.62□□□□□ -2.15
CCDC30-203ENST00000428554 F5P12259 2224 aa1.62□□□□□ -2.15
CCDC30-203ENST00000428554 CRIP1P50238 77 aa1.62□□□□□ -2.15
CCDC30-203ENST00000428554 HSPG2P98160 4391 aa1.61□□□□□ -2.15
CCDC30-203ENST00000428554 SPTY2D1-AS1A0A0U1RR47 76 aa1.61□□□□□ -2.15
CCDC30-203ENST00000428554 NDUFA3O95167 84 aa1.61□□□□□ -2.15
CCDC30-203ENST00000428554 TMEM167BQ9NRX6 74 aa1.6□□□□□ -2.15
CCDC30-203ENST00000428554 MYCBP2O75592 4640 aa1.6□□□□□ -2.15
CCDC30-203ENST00000428554 KMT2DO14686 5537 aa1.59□□□□□ -2.15
CCDC30-203ENST00000428554 DNAH9Q9NYC9 4486 aa1.59□□□□□ -2.15
CCDC30-203ENST00000428554 Q8IZM0 81 aa1.59□□□□□ -2.15
CCDC30-203ENST00000428554 LYNX1G3V0Z9 82 aa1.59□□□□□ -2.16
CCDC30-203ENST00000428554 USF3Q68DE3 2245 aa1.59□□□□□ -2.16
CCDC30-203ENST00000428554 KRTAP6-3Q3LI67 103 aa1.58□□□□□ -2.16
CCDC30-203ENST00000428554 COX6B2Q6YFQ2 88 aa1.58□□□□□ -2.16
CCDC30-203ENST00000428554 DYNC1H1Q14204 4646 aaKnown RBP1.58□□□□□ -2.16
CCDC30-203ENST00000428554 FAT2Q9NYQ8 4349 aa1.58□□□□□ -2.16
CCDC30-203ENST00000428554 I3L2K1 104 aa1.58□□□□□ -2.16
CCDC30-203ENST00000428554 PRB2P02812 416 aaPredicted RBP1.58□□□□□ -2.16
CCDC30-203ENST00000428554 KRTAP2-3P0C7H8 128 aa1.58□□□□□ -2.16
CCDC30-203ENST00000428554 FXYD6P3P58550 94 aa1.58□□□□□ -2.16
CCDC30-203ENST00000428554 PCOTHQ58A44 107 aa1.58□□□□□ -2.16
CCDC30-203ENST00000428554 KRTAP2-4Q9BYR9 128 aa1.58□□□□□ -2.16
CCDC30-203ENST00000428554 KRTAP5-2Q701N4 177 aa1.57□□□□□ -2.16
CCDC30-203ENST00000428554 HUWE1Q7Z6Z7 4374 aaKnown RBP1.57□□□□□ -2.16
CCDC30-203ENST00000428554 ALMS1Q8TCU4 4167 aa1.57□□□□□ -2.16
CCDC30-203ENST00000428554 LYNX1P0DP58 116 aa1.57□□□□□ -2.16
CCDC30-203ENST00000428554 LINC00158P58513 81 aa1.57□□□□□ -2.16
CCDC30-203ENST00000428554 LRP2P98164 4655 aa1.57□□□□□ -2.16
CCDC30-203ENST00000428554 KRTAP4-3Q9BYR4 195 aa1.57□□□□□ -2.16
CCDC30-203ENST00000428554 CDKN2A-AS1Q9UH64 79 aa1.57□□□□□ -2.16
CCDC30-203ENST00000428554 CNFNQ9BYD5 112 aa1.56□□□□□ -2.16
CCDC30-203ENST00000428554 K7EIL1 84 aa1.56□□□□□ -2.16
CCDC30-203ENST00000428554 K7EQZ3 153 aa1.56□□□□□ -2.16
CCDC30-203ENST00000428554 SMIM2Q9BVW6 85 aa1.56□□□□□ -2.16
CCDC30-203ENST00000428554 FREM1Q5H8C1 2179 aa1.56□□□□□ -2.16
CCDC30-203ENST00000428554 TNCP24821 2201 aa1.56□□□□□ -2.16
CCDC30-203ENST00000428554 UBE2DNLQ8IWF7 75 aa1.55□□□□□ -2.16
CCDC30-203ENST00000428554 TIMM8BQ9Y5J9 83 aaPredicted RBP1.55□□□□□ -2.16
CCDC30-203ENST00000428554 PLECQ15149 4684 aaKnown RBP1.55□□□□□ -2.16
CCDC30-203ENST00000428554 FCGBPQ9Y6R7 5405 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms