RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 I3L3M4 83 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 M0R3E3 92 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 INE1O15225 51 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 NDUFA1O15239 70 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 CCL18P55774 89 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 KRTAP13-2Q52LG2 175 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 ORMDL1Q9P0S3 153 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 DNAJC13O75165 2243 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 IGKV3D-7A0A0C4DH55 119 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 IGKV3OR2-268A0A0C4DH90 116 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 CHKB-CPT1BH3BT56 60 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 M0R2N4 97 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 C14orf177Q52M58 125 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 MUSTN1Q8IVN3 82 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 LEAP2Q969E1 77 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 ZNF625Q96I27 306 aaPredicted RBP1.67□□□□□ -2.14
RGPD1-203ENST00000428128 STAB2Q8WWQ8 2551 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 H3BVH4 76 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 M0R1W7 72 aa1.67□□□□□ -2.14
RGPD1-203ENST00000428128 IGKV2-40A0A087WW87 121 aaPredicted RBP1.66□□□□□ -2.14
RGPD1-203ENST00000428128 M0QY20 66 aa1.66□□□□□ -2.14
RGPD1-203ENST00000428128 IGKV2D-40P01614 121 aaPredicted RBP1.66□□□□□ -2.14
RGPD1-203ENST00000428128 NDPQ00604 133 aa1.66□□□□□ -2.14
RGPD1-203ENST00000428128 C20orf197Q8N268 126 aa1.66□□□□□ -2.14
RGPD1-203ENST00000428128 ZCCHC13Q8WW36 166 aaKnown RBP1.66□□□□□ -2.14
RGPD1-203ENST00000428128 TRBV6-4A0A1B0GX49 114 aa1.66□□□□□ -2.14
RGPD1-203ENST00000428128 KRTAP10-4P60372 401 aaPredicted RBP1.66□□□□□ -2.14
RGPD1-203ENST00000428128 KRTAP10-8P60410 259 aa1.66□□□□□ -2.14
RGPD1-203ENST00000428128 ANAPC11Q9NYG5 84 aa1.66□□□□□ -2.14
RGPD1-203ENST00000428128 NBDYA0A0U1RRE5 68 aa1.65□□□□□ -2.14
RGPD1-203ENST00000428128 PRB2P02812 416 aaPredicted RBP1.65□□□□□ -2.14
RGPD1-203ENST00000428128 DEFB108BQ8NET1 73 aa1.65□□□□□ -2.14
RGPD1-203ENST00000428128 RPL39LQ96EH5 51 aaKnown RBP1.65□□□□□ -2.14
RGPD1-203ENST00000428128 SPATA8Q6RVD6 105 aa1.65□□□□□ -2.15
RGPD1-203ENST00000428128 ARFGEF3Q5TH69 2177 aa1.65□□□□□ -2.15
RGPD1-203ENST00000428128 LOC110117498A0A087WWA1 95 aa1.64□□□□□ -2.15
RGPD1-203ENST00000428128 IGKV2-28A0A075B6P5 120 aa1.64□□□□□ -2.15
RGPD1-203ENST00000428128 LRCOL1A6NCL2 159 aa1.64□□□□□ -2.15
RGPD1-203ENST00000428128 IGKV2D-28P01615 120 aa1.64□□□□□ -2.15
RGPD1-203ENST00000428128 IGKV3-20P01619 116 aa1.64□□□□□ -2.15
RGPD1-203ENST00000428128 A0A0G2JQZ4 141 aa1.64□□□□□ -2.15
RGPD1-203ENST00000428128 H3BUA1 57 aa1.64□□□□□ -2.15
RGPD1-203ENST00000428128 LINC00308Q8TCZ7 52 aa1.64□□□□□ -2.15
RGPD1-203ENST00000428128 LINC00472Q9H8W2 130 aa1.64□□□□□ -2.15
RGPD1-203ENST00000428128 A0A087WVE0 104 aa1.63□□□□□ -2.15
RGPD1-203ENST00000428128 TRAV21A0A0B4J279 112 aa1.63□□□□□ -2.15
RGPD1-203ENST00000428128 RPL39P62891 51 aaKnown RBP1.63□□□□□ -2.15
RGPD1-203ENST00000428128 LELP1Q5T871 98 aa1.63□□□□□ -2.15
RGPD1-203ENST00000428128 MINOS1Q5TGZ0 78 aa1.63□□□□□ -2.15
RGPD1-203ENST00000428128 SFTA2Q6UW10 78 aa1.63□□□□□ -2.15
RGPD1-203ENST00000428128 NDUFA4O00483 81 aa1.62□□□□□ -2.15
RGPD1-203ENST00000428128 MT3P25713 68 aa1.62□□□□□ -2.15
RGPD1-203ENST00000428128 Q8N9L7 120 aa1.62□□□□□ -2.15
RGPD1-203ENST00000428128 IGKV2-29A2NJV5 120 aaPredicted RBP1.61□□□□□ -2.15
RGPD1-203ENST00000428128 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
RGPD1-203ENST00000428128 DEFB114Q30KQ6 69 aa1.61□□□□□ -2.15
RGPD1-203ENST00000428128 CADP27708 2225 aa1.61□□□□□ -2.15
RGPD1-203ENST00000428128 H0YGX0 51 aa1.61□□□□□ -2.15
RGPD1-203ENST00000428128 KRTAP5-9P26371 169 aa1.61□□□□□ -2.15
RGPD1-203ENST00000428128 C10orf99Q6UWK7 81 aa1.61□□□□□ -2.15
RGPD1-203ENST00000428128 Q6ZSA8 131 aa1.61□□□□□ -2.15
RGPD1-203ENST00000428128 COX7B2Q8TF08 81 aa1.61□□□□□ -2.15
RGPD1-203ENST00000428128 NEBP20929 6669 aa1.61□□□□□ -2.15
RGPD1-203ENST00000428128 PLCE1Q9P212 2302 aa1.61□□□□□ -2.15
RGPD1-203ENST00000428128 SRRM2Q9UQ35 2752 aaKnown RBP1.6□□□□□ -2.15
RGPD1-203ENST00000428128 UQCR11O14957 56 aa1.6□□□□□ -2.15
RGPD1-203ENST00000428128 KRTAP10-11P60412 298 aa1.6□□□□□ -2.15
RGPD1-203ENST00000428128 C5orf56Q8N8D9 126 aa1.6□□□□□ -2.15
RGPD1-203ENST00000428128 Q96NJ1 140 aa1.6□□□□□ -2.15
RGPD1-203ENST00000428128 DSCR10P59022 87 aa1.6□□□□□ -2.15
RGPD1-203ENST00000428128 COX6A2Q02221 97 aa1.6□□□□□ -2.15
RGPD1-203ENST00000428128 SPAG11BQ08648 103 aa1.6□□□□□ -2.15
RGPD1-203ENST00000428128 KRTAP20-1Q3LI63 56 aa1.6□□□□□ -2.15
RGPD1-203ENST00000428128 SPAG11AQ6PDA7 123 aa1.6□□□□□ -2.15
RGPD1-203ENST00000428128 JMJD7-PLA2G4BH0Y9G9 81 aa1.59□□□□□ -2.15
RGPD1-203ENST00000428128 LY6G6CO95867 125 aa1.59□□□□□ -2.16
RGPD1-203ENST00000428128 H3BNG1 76 aa1.59□□□□□ -2.16
RGPD1-203ENST00000428128 SMIM11BQ8TCY0 68 aa1.59□□□□□ -2.16
RGPD1-203ENST00000428128 CDKN2A-AS1Q9UH64 79 aa1.59□□□□□ -2.16
RGPD1-203ENST00000428128 IGLV4-60A0A075B6I1 120 aa1.58□□□□□ -2.16
RGPD1-203ENST00000428128 USMG5Q96IX5 58 aa1.58□□□□□ -2.16
RGPD1-203ENST00000428128 PRR15LQ9BU68 103 aa1.58□□□□□ -2.16
RGPD1-203ENST00000428128 TIMM8BQ9Y5J9 83 aaPredicted RBP1.58□□□□□ -2.16
RGPD1-203ENST00000428128 LCE1FQ5T754 118 aa1.57□□□□□ -2.16
RGPD1-203ENST00000428128 SPRR5A0A1B0GTR4 108 aa1.57□□□□□ -2.16
RGPD1-203ENST00000428128 COX17Q14061 63 aa1.57□□□□□ -2.16
RGPD1-203ENST00000428128 LINC00959A0A1B0GUT2 108 aa1.57□□□□□ -2.16
RGPD1-203ENST00000428128 IGLV6-57P01721 117 aa1.57□□□□□ -2.16
RGPD1-203ENST00000428128 ENHOQ6UWT2 76 aa1.57□□□□□ -2.16
RGPD1-203ENST00000428128 SNURFQ9Y675 71 aa1.57□□□□□ -2.16
RGPD1-203ENST00000428128 SPINK7P58062 85 aa1.56□□□□□ -2.16
RGPD1-203ENST00000428128 IGKV4-1P06312 121 aa1.56□□□□□ -2.16
RGPD1-203ENST00000428128 LCE1EQ5T753 118 aa1.56□□□□□ -2.16
RGPD1-203ENST00000428128 KRTAP5-4Q6L8H1 288 aa1.56□□□□□ -2.16
RGPD1-203ENST00000428128 LINC00575Q6W349 94 aa1.56□□□□□ -2.16
RGPD1-203ENST00000428128 GVQW2A0A096LPI5 108 aaPredicted RBP1.56□□□□□ -2.16
RGPD1-203ENST00000428128 DNAL4O96015 105 aa1.56□□□□□ -2.16
RGPD1-203ENST00000428128 APELAP0DMC3 54 aa1.56□□□□□ -2.16
RGPD1-203ENST00000428128 RPL37AP61513 92 aaKnown RBP1.56□□□□□ -2.16
RGPD1-203ENST00000428128 NREPQ16612 68 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms