RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
SGCE-203ENST00000425444 BAALC-AS2P0C853 105 aa6.59□□□□□ -1.35
SGCE-203ENST00000425444 SMIM6P0DI80 62 aa6.58□□□□□ -1.36
SGCE-203ENST00000425444 ATXN8Q156A1 80 aa6.58□□□□□ -1.36
SGCE-203ENST00000425444 NAA38Q9BRA0 125 aaKnown RBP6.58□□□□□ -1.36
SGCE-203ENST00000425444 LINC00472Q9H8W2 130 aa6.58□□□□□ -1.36
SGCE-203ENST00000425444 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
SGCE-203ENST00000425444 C9JAW5 83 aa6.56□□□□□ -1.36
SGCE-203ENST00000425444 TRBV20-1A0A075B6N2 111 aa6.55□□□□□ -1.36
SGCE-203ENST00000425444 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
SGCE-203ENST00000425444 C21orf62-AS1Q17RA5 79 aa6.54□□□□□ -1.36
SGCE-203ENST00000425444 TSTD3H0UI37 97 aa6.53□□□□□ -1.36
SGCE-203ENST00000425444 LYRM7Q5U5X0 104 aa6.53□□□□□ -1.36
SGCE-203ENST00000425444 NOTCH2NLQ7Z3S9 236 aa6.53□□□□□ -1.36
SGCE-203ENST00000425444 A0A1B0GVX0 72 aa6.52□□□□□ -1.37
SGCE-203ENST00000425444 C8orf87E5RJ46 101 aa6.52□□□□□ -1.37
SGCE-203ENST00000425444 JMJD7-PLA2G4BH0Y9G9 81 aa6.52□□□□□ -1.37
SGCE-203ENST00000425444 BATFQ16520 125 aa6.52□□□□□ -1.37
SGCE-203ENST00000425444 J3KT08 172 aa6.51□□□□□ -1.37
SGCE-203ENST00000425444 Q6ZQT0 140 aa6.49□□□□□ -1.37
SGCE-203ENST00000425444 KRTAP9-8Q9BYQ0 159 aa6.49□□□□□ -1.37
SGCE-203ENST00000425444 LOC110117498A0A087WWA1 95 aa6.47□□□□□ -1.37
SGCE-203ENST00000425444 FAM236DA0A1B0GTK5 79 aa6.47□□□□□ -1.37
SGCE-203ENST00000425444 NDUFB1O75438 58 aa6.47□□□□□ -1.37
SGCE-203ENST00000425444 FAM236CP0DP71 79 aa6.47□□□□□ -1.37
SGCE-203ENST00000425444 PDE6GP18545 87 aa6.47□□□□□ -1.37
SGCE-203ENST00000425444 C14orf132Q9NPU4 83 aa6.46□□□□□ -1.38
SGCE-203ENST00000425444 NEBP20929 6669 aa6.45□□□□□ -1.38
SGCE-203ENST00000425444 LOC105371267A0A1B0GV96 52 aa6.44□□□□□ -1.38
SGCE-203ENST00000425444 A0A1B0GW54 56 aa6.44□□□□□ -1.38
SGCE-203ENST00000425444 RBM12B-AS1Q9P1G2 102 aa6.43□□□□□ -1.38
SGCE-203ENST00000425444 C9orf118A6NHY6 69 aa6.41□□□□□ -1.38
SGCE-203ENST00000425444 A8MWP4 228 aa6.41□□□□□ -1.38
SGCE-203ENST00000425444 KRTAP6-3Q3LI67 103 aa6.41□□□□□ -1.38
SGCE-203ENST00000425444 ZCCHC13Q8WW36 166 aaKnown RBP6.41□□□□□ -1.38
SGCE-203ENST00000425444 LINC00846Q9NV44 126 aa6.41□□□□□ -1.38
SGCE-203ENST00000425444 NREPQ16612 68 aa6.4□□□□□ -1.38
SGCE-203ENST00000425444 C8orf17Q9NRJ1 99 aa6.4□□□□□ -1.38
SGCE-203ENST00000425444 H3BT86 120 aa6.39□□□□□ -1.39
SGCE-203ENST00000425444 HRES1P13985 223 aa6.39□□□□□ -1.39
SGCE-203ENST00000425444 MTURNQ8N3F0 131 aa6.39□□□□□ -1.39
SGCE-203ENST00000425444 IGKV3D-7A0A0C4DH55 119 aa6.38□□□□□ -1.39
SGCE-203ENST00000425444 A0A1W2PPM0 123 aa6.38□□□□□ -1.39
SGCE-203ENST00000425444 TAX1BP3O14907 124 aa6.38□□□□□ -1.39
SGCE-203ENST00000425444 Q8N9P0 234 aaPredicted RBP6.37□□□□□ -1.39
SGCE-203ENST00000425444 MPLKIPQ8TAP9 179 aa6.36□□□□□ -1.39
SGCE-203ENST00000425444 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
SGCE-203ENST00000425444 MT2AP02795 61 aa6.35□□□□□ -1.39
SGCE-203ENST00000425444 Q6ZVQ6 151 aa6.35□□□□□ -1.39
SGCE-203ENST00000425444 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
SGCE-203ENST00000425444 SPINK7P58062 85 aa6.34□□□□□ -1.39
SGCE-203ENST00000425444 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
SGCE-203ENST00000425444 SPCS1Q9Y6A9 102 aa6.31□□□□□ -1.4
SGCE-203ENST00000425444 MMP24-AS1A0A0U1RRL7 71 aa6.3□□□□□ -1.4
SGCE-203ENST00000425444 MT1FP04733 61 aa6.3□□□□□ -1.4
SGCE-203ENST00000425444 KRTAP19-6Q3LI70 58 aa6.3□□□□□ -1.4
SGCE-203ENST00000425444 TMEM254Q8TBM7 123 aa6.3□□□□□ -1.4
SGCE-203ENST00000425444 MRPL34Q9BQ48 92 aaKnown RBP6.3□□□□□ -1.4
SGCE-203ENST00000425444 K7EQZ3 153 aa6.29□□□□□ -1.4
SGCE-203ENST00000425444 BPY2O14599 106 aa6.29□□□□□ -1.4
SGCE-203ENST00000425444 NDUFS5O43920 106 aa6.29□□□□□ -1.4
SGCE-203ENST00000425444 hDV103S1A0JD37 113 aa6.28□□□□□ -1.4
SGCE-203ENST00000425444 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
SGCE-203ENST00000425444 WFDC13Q8IUB5 93 aa6.28□□□□□ -1.4
SGCE-203ENST00000425444 KRTAP20-1Q3LI63 56 aa6.27□□□□□ -1.41
SGCE-203ENST00000425444 COL5A1-AS1Q5SY13 56 aa6.25□□□□□ -1.41
SGCE-203ENST00000425444 Q8N9L7 120 aa6.21□□□□□ -1.42
SGCE-203ENST00000425444 K7EP34 96 aa6.19□□□□□ -1.42
SGCE-203ENST00000425444 CASC2Q6XLA1 102 aa6.19□□□□□ -1.42
SGCE-203ENST00000425444 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
SGCE-203ENST00000425444 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
SGCE-203ENST00000425444 UBL5Q9BZL1 73 aa6.18□□□□□ -1.42
SGCE-203ENST00000425444 HCG22E2RYF7 251 aa6.16□□□□□ -1.42
SGCE-203ENST00000425444 C7orf65Q6ZTY9 151 aa6.16□□□□□ -1.42
SGCE-203ENST00000425444 PRO0461Q9UI25 63 aa6.16□□□□□ -1.42
SGCE-203ENST00000425444 PCP4L1A6NKN8 68 aa6.15□□□□□ -1.42
SGCE-203ENST00000425444 MDN1Q9NU22 5596 aa6.14□□□□□ -1.43
SGCE-203ENST00000425444 Q5W150 140 aa6.13□□□□□ -1.43
SGCE-203ENST00000425444 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
SGCE-203ENST00000425444 CXCL6P80162 114 aa6.11□□□□□ -1.43
SGCE-203ENST00000425444 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
SGCE-203ENST00000425444 F8W1H4 67 aa6.07□□□□□ -1.44
SGCE-203ENST00000425444 ETDBQ3ZM63 59 aa6.05□□□□□ -1.44
SGCE-203ENST00000425444 C4orf26Q17RF5 130 aa6.04□□□□□ -1.44
SGCE-203ENST00000425444 KMT2DO14686 5537 aa6.03□□□□□ -1.44
SGCE-203ENST00000425444 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
SGCE-203ENST00000425444 KRTAP4-6Q9BYQ5 205 aa6.01□□□□□ -1.45
SGCE-203ENST00000425444 TP53AIP1Q9HCN2 124 aa6□□□□□ -1.45
SGCE-203ENST00000425444 C5orf47Q569G3 176 aa5.94□□□□□ -1.46
SGCE-203ENST00000425444 C1orf64Q8NEQ6 169 aa5.93□□□□□ -1.46
SGCE-203ENST00000425444 S4R3F8 94 aa5.93□□□□□ -1.46
SGCE-203ENST00000425444 ACYP1P07311 99 aa5.92□□□□□ -1.46
SGCE-203ENST00000425444 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
SGCE-203ENST00000425444 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
SGCE-203ENST00000425444 FAM236AA0A1B0GUQ0 79 aa5.9□□□□□ -1.46
SGCE-203ENST00000425444 FAM236BA0A1B0GV22 79 aa5.9□□□□□ -1.46
SGCE-203ENST00000425444 KRTAP3-1Q9BYR8 98 aa5.9□□□□□ -1.46
SGCE-203ENST00000425444 ATP5EP2Q5VTU8 51 aa5.89□□□□□ -1.47
SGCE-203ENST00000425444 TRAV22A0A0B4J277 110 aa5.88□□□□□ -1.47
SGCE-203ENST00000425444 FAM240AA0A1B0GVK7 77 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms