RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 A0A087WSZ3 146 aa8.85□□□□□ -0.99
DDR1-234ENST00000424544 LCE2CQ5TA81 110 aa8.84□□□□□ -0.99
DDR1-234ENST00000424544 SS18L2Q9UHA2 77 aa8.83□□□□□ -1
DDR1-234ENST00000424544 KRTAP19-2Q3LHN2 52 aa8.82□□□□□ -1
DDR1-234ENST00000424544 LINC00643Q86TS7 51 aa8.82□□□□□ -1
DDR1-234ENST00000424544 IMUPQ9GZP8 106 aa8.82□□□□□ -1
DDR1-234ENST00000424544 PCP4P48539 62 aa8.8□□□□□ -1
DDR1-234ENST00000424544 LCE2DQ5TA82 110 aaPredicted RBP8.77□□□□□ -1.01
DDR1-234ENST00000424544 C1orf195Q5TG92 126 aa8.77□□□□□ -1.01
DDR1-234ENST00000424544 NREPQ16612 68 aa8.74□□□□□ -1.01
DDR1-234ENST00000424544 PCOTHQ58A44 107 aa8.74□□□□□ -1.01
DDR1-234ENST00000424544 ATP5EP2Q5VTU8 51 aa8.74□□□□□ -1.01
DDR1-234ENST00000424544 LINC00472Q9H8W2 130 aa8.73□□□□□ -1.01
DDR1-234ENST00000424544 C9orf92A6NGG3 77 aa8.72□□□□□ -1.01
DDR1-234ENST00000424544 MT-ATP8P03928 68 aa8.72□□□□□ -1.01
DDR1-234ENST00000424544 UBL5Q9BZL1 73 aa8.72□□□□□ -1.01
DDR1-234ENST00000424544 Q96NJ1 140 aa8.71□□□□□ -1.02
DDR1-234ENST00000424544 LINC00846Q9NV44 126 aa8.71□□□□□ -1.02
DDR1-234ENST00000424544 MT1HP80294 61 aa8.68□□□□□ -1.02
DDR1-234ENST00000424544 DEFB116Q30KQ4 102 aa8.68□□□□□ -1.02
DDR1-234ENST00000424544 Q6ZVQ6 151 aa8.68□□□□□ -1.02
DDR1-234ENST00000424544 IGKV4-1P06312 121 aa8.67□□□□□ -1.02
DDR1-234ENST00000424544 J3KT08 172 aa8.66□□□□□ -1.02
DDR1-234ENST00000424544 FSIP2Q5CZC0 6907 aa8.65□□□□□ -1.02
DDR1-234ENST00000424544 FLGP20930 4061 aaPredicted RBP8.62□□□□□ -1.03
DDR1-234ENST00000424544 BPY2O14599 106 aa8.62□□□□□ -1.03
DDR1-234ENST00000424544 RPL37P61927 97 aaKnown RBP8.61□□□□□ -1.03
DDR1-234ENST00000424544 NDUFB1O75438 58 aa8.59□□□□□ -1.03
DDR1-234ENST00000424544 CXCL6P80162 114 aa8.58□□□□□ -1.04
DDR1-234ENST00000424544 ANAPC13Q9BS18 74 aa8.58□□□□□ -1.04
DDR1-234ENST00000424544 A8MWP4 228 aa8.57□□□□□ -1.04
DDR1-234ENST00000424544 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
DDR1-234ENST00000424544 DSCR10P59022 87 aa8.57□□□□□ -1.04
DDR1-234ENST00000424544 CRCT1Q9UGL9 99 aa8.56□□□□□ -1.04
DDR1-234ENST00000424544 A0A1B0GVX0 72 aa8.55□□□□□ -1.04
DDR1-234ENST00000424544 IGKV3D-7A0A0C4DH55 119 aa8.54□□□□□ -1.04
DDR1-234ENST00000424544 ATOX1O00244 68 aa8.54□□□□□ -1.04
DDR1-234ENST00000424544 IGHV6-1A0A0B4J1U7 121 aa8.53□□□□□ -1.04
DDR1-234ENST00000424544 KRTAP10-6P60371 365 aaPredicted RBP8.53□□□□□ -1.04
DDR1-234ENST00000424544 PRR15Q8IV56 129 aa8.53□□□□□ -1.04
DDR1-234ENST00000424544 LINC00313P59037 77 aa8.52□□□□□ -1.05
DDR1-234ENST00000424544 C8orf87E5RJ46 101 aa8.51□□□□□ -1.05
DDR1-234ENST00000424544 FAM236AA0A1B0GUQ0 79 aa8.5□□□□□ -1.05
DDR1-234ENST00000424544 FAM236BA0A1B0GV22 79 aa8.5□□□□□ -1.05
DDR1-234ENST00000424544 K7EQZ3 153 aa8.5□□□□□ -1.05
DDR1-234ENST00000424544 HIST1H4AP62805 103 aaKnown RBP8.5□□□□□ -1.05
DDR1-234ENST00000424544 SMIM20Q8N5G0 67 aa8.49□□□□□ -1.05
DDR1-234ENST00000424544 NOTCH2NLQ7Z3S9 236 aa8.48□□□□□ -1.05
DDR1-234ENST00000424544 Q8N9L7 120 aa8.47□□□□□ -1.05
DDR1-234ENST00000424544 C8orf17Q9NRJ1 99 aa8.47□□□□□ -1.05
DDR1-234ENST00000424544 Q75L30 129 aa8.44□□□□□ -1.06
DDR1-234ENST00000424544 MMP24-AS1A0A0U1RRL7 71 aa8.41□□□□□ -1.06
DDR1-234ENST00000424544 KRTAP16-1A8MUX0 517 aa8.41□□□□□ -1.06
DDR1-234ENST00000424544 UQCRQO14949 82 aa8.41□□□□□ -1.06
DDR1-234ENST00000424544 hDV103S1A0JD37 113 aa8.39□□□□□ -1.07
DDR1-234ENST00000424544 COX6B2Q6YFQ2 88 aa8.39□□□□□ -1.07
DDR1-234ENST00000424544 M0R2T5 61 aa8.38□□□□□ -1.07
DDR1-234ENST00000424544 ATP11AUNQ6ZP68 121 aa8.38□□□□□ -1.07
DDR1-234ENST00000424544 TMEM254Q8TBM7 123 aa8.38□□□□□ -1.07
DDR1-234ENST00000424544 HCG22E2RYF7 251 aa8.37□□□□□ -1.07
DDR1-234ENST00000424544 COX7CP15954 63 aa8.37□□□□□ -1.07
DDR1-234ENST00000424544 CASC2Q6XLA1 102 aa8.37□□□□□ -1.07
DDR1-234ENST00000424544 WFDC13Q8IUB5 93 aa8.37□□□□□ -1.07
DDR1-234ENST00000424544 SERP2Q8N6R1 65 aa8.37□□□□□ -1.07
DDR1-234ENST00000424544 A8MUU9 505 aa8.36□□□□□ -1.07
DDR1-234ENST00000424544 C20orf166-AS1Q96NR2 134 aa8.36□□□□□ -1.07
DDR1-234ENST00000424544 MRPL34Q9BQ48 92 aaKnown RBP8.36□□□□□ -1.07
DDR1-234ENST00000424544 Q8N9P0 234 aaPredicted RBP8.33□□□□□ -1.08
DDR1-234ENST00000424544 TRAV7A0A075B6U4 112 aa8.32□□□□□ -1.08
DDR1-234ENST00000424544 A0A087WVE0 104 aa8.32□□□□□ -1.08
DDR1-234ENST00000424544 NDUFS5O43920 106 aa8.28□□□□□ -1.08
DDR1-234ENST00000424544 CCDC179H3BU77 68 aa8.24□□□□□ -1.09
DDR1-234ENST00000424544 KRTAP9-8Q9BYQ0 159 aa8.24□□□□□ -1.09
DDR1-234ENST00000424544 NDUFC1O43677 76 aa8.21□□□□□ -1.1
DDR1-234ENST00000424544 ZCCHC13Q8WW36 166 aaKnown RBP8.21□□□□□ -1.1
DDR1-234ENST00000424544 TP53AIP1Q9HCN2 124 aa8.2□□□□□ -1.1
DDR1-234ENST00000424544 SSPOA2VEC9 5147 aa8.16□□□□□ -1.1
DDR1-234ENST00000424544 USH2AO75445 5202 aa8.16□□□□□ -1.1
DDR1-234ENST00000424544 Q5W150 140 aa8.15□□□□□ -1.1
DDR1-234ENST00000424544 TMEM258P61165 79 aa8.14□□□□□ -1.11
DDR1-234ENST00000424544 KLKP1Q107X0 134 aa8.14□□□□□ -1.11
DDR1-234ENST00000424544 MPLKIPQ8TAP9 179 aa8.14□□□□□ -1.11
DDR1-234ENST00000424544 C5orf47Q569G3 176 aa8.13□□□□□ -1.11
DDR1-234ENST00000424544 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
DDR1-234ENST00000424544 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
DDR1-234ENST00000424544 HRES1P13985 223 aa8.09□□□□□ -1.11
DDR1-234ENST00000424544 H3BPC8 53 aa8.08□□□□□ -1.12
DDR1-234ENST00000424544 KRTAP9-7A8MTY7 169 aa8.07□□□□□ -1.12
DDR1-234ENST00000424544 MP68P56378 58 aa8.07□□□□□ -1.12
DDR1-234ENST00000424544 ATP5EP56381 51 aaPredicted RBP8.07□□□□□ -1.12
DDR1-234ENST00000424544 TRAV22A0A0B4J277 110 aa8.05□□□□□ -1.12
DDR1-234ENST00000424544 MT2AP02795 61 aa8.05□□□□□ -1.12
DDR1-234ENST00000424544 SPINK7P58062 85 aa8.05□□□□□ -1.12
DDR1-234ENST00000424544 H0Y9P7 68 aa8.02□□□□□ -1.13
DDR1-234ENST00000424544 RPS28P62857 69 aaKnown RBP8.02□□□□□ -1.13
DDR1-234ENST00000424544 IGKV2D-30A0A075B6S6 120 aa8.01□□□□□ -1.13
DDR1-234ENST00000424544 IGKV2-30P06310 120 aa8.01□□□□□ -1.13
DDR1-234ENST00000424544 MT1FP04733 61 aa7.99□□□□□ -1.13
DDR1-234ENST00000424544 C7orf65Q6ZTY9 151 aa7.99□□□□□ -1.13
DDR1-234ENST00000424544 RBM12B-AS1Q9P1G2 102 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms