RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 MP68P56378 58 aa10.03□□□□□ -0.8
CMTM3-202ENST00000424011 SPANXA2-OT1Q8N9U9 137 aa10.03□□□□□ -0.8
CMTM3-202ENST00000424011 KMT2CQ8NEZ4 4911 aaKnown RBP10.03□□□□□ -0.8
CMTM3-202ENST00000424011 CIRBP-AS1Q8TBR5 109 aa10.02□□□□□ -0.8
CMTM3-202ENST00000424011 Q6ZSA8 131 aa10.02□□□□□ -0.81
CMTM3-202ENST00000424011 Q75L30 129 aa10.02□□□□□ -0.81
CMTM3-202ENST00000424011 RPL37AP61513 92 aaKnown RBP10.01□□□□□ -0.81
CMTM3-202ENST00000424011 IGLV7-43P04211 117 aa10.01□□□□□ -0.81
CMTM3-202ENST00000424011 RYR2Q92736 4967 aa10□□□□□ -0.81
CMTM3-202ENST00000424011 DNAH8Q96JB1 4490 aa10□□□□□ -0.81
CMTM3-202ENST00000424011 DEFB116Q30KQ4 102 aa10□□□□□ -0.81
CMTM3-202ENST00000424011 KRTAP10-1P60331 282 aa9.98□□□□□ -0.81
CMTM3-202ENST00000424011 IGLV9-49A0A0B4J1Y8 123 aa9.97□□□□□ -0.81
CMTM3-202ENST00000424011 LOC101927531A0A1B0GV80 90 aa9.97□□□□□ -0.81
CMTM3-202ENST00000424011 A6NED7 52 aa9.97□□□□□ -0.81
CMTM3-202ENST00000424011 C7orf65Q6ZTY9 151 aa9.94□□□□□ -0.82
CMTM3-202ENST00000424011 CDC42SE1Q9NRR8 79 aa9.94□□□□□ -0.82
CMTM3-202ENST00000424011 H3BPC8 53 aa9.93□□□□□ -0.82
CMTM3-202ENST00000424011 WFDC13Q8IUB5 93 aa9.92□□□□□ -0.82
CMTM3-202ENST00000424011 H0Y9P7 68 aa9.89□□□□□ -0.83
CMTM3-202ENST00000424011 MOBPQ13875 183 aa9.89□□□□□ -0.83
CMTM3-202ENST00000424011 PKHD1P08F94 4074 aa9.88□□□□□ -0.83
CMTM3-202ENST00000424011 A0A1B0GVY2 172 aa9.88□□□□□ -0.83
CMTM3-202ENST00000424011 LINC00472Q9H8W2 130 aa9.88□□□□□ -0.83
CMTM3-202ENST00000424011 C4orf48Q5BLP8 95 aa9.88□□□□□ -0.83
CMTM3-202ENST00000424011 COA5Q86WW8 74 aa9.87□□□□□ -0.83
CMTM3-202ENST00000424011 ANAPC11Q9NYG5 84 aa9.87□□□□□ -0.83
CMTM3-202ENST00000424011 KRTAP29-1A8MX34 341 aaPredicted RBP9.86□□□□□ -0.83
CMTM3-202ENST00000424011 LRP1BQ9NZR2 4599 aa9.86□□□□□ -0.83
CMTM3-202ENST00000424011 A8MWP4 228 aa9.81□□□□□ -0.84
CMTM3-202ENST00000424011 C8orf87E5RJ46 101 aa9.81□□□□□ -0.84
CMTM3-202ENST00000424011 DYNC1H1Q14204 4646 aaKnown RBP9.81□□□□□ -0.84
CMTM3-202ENST00000424011 RYR3Q15413 4870 aa9.81□□□□□ -0.84
CMTM3-202ENST00000424011 SSBP3-AS1Q7Z2R9 100 aa9.81□□□□□ -0.84
CMTM3-202ENST00000424011 LINC01558Q9Y6Z2 57 aa9.8□□□□□ -0.84
CMTM3-202ENST00000424011 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
CMTM3-202ENST00000424011 CASC2Q6XLA1 102 aa9.78□□□□□ -0.84
CMTM3-202ENST00000424011 Q96NJ1 140 aa9.78□□□□□ -0.84
CMTM3-202ENST00000424011 SPAG11AQ6PDA7 123 aa9.73□□□□□ -0.85
CMTM3-202ENST00000424011 MMP24-AS1A0A0U1RRL7 71 aa9.71□□□□□ -0.86
CMTM3-202ENST00000424011 SPINK7P58062 85 aa9.71□□□□□ -0.86
CMTM3-202ENST00000424011 CDK2AP2O75956 126 aa9.7□□□□□ -0.86
CMTM3-202ENST00000424011 APOBP04114 4563 aaKnown RBP9.7□□□□□ -0.86
CMTM3-202ENST00000424011 VPS13BQ7Z7G8 4022 aa9.69□□□□□ -0.86
CMTM3-202ENST00000424011 A0A087X002 238 aa9.68□□□□□ -0.86
CMTM3-202ENST00000424011 SPINK6Q6UWN8 80 aa9.67□□□□□ -0.86
CMTM3-202ENST00000424011 KRTAP1-4P0C5Y4 121 aa9.66□□□□□ -0.86
CMTM3-202ENST00000424011 LINC00313P59037 77 aa9.66□□□□□ -0.86
CMTM3-202ENST00000424011 KRTAP13-2Q52LG2 175 aa9.66□□□□□ -0.86
CMTM3-202ENST00000424011 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
CMTM3-202ENST00000424011 A0A1B0GVX0 72 aa9.64□□□□□ -0.87
CMTM3-202ENST00000424011 PCOTHQ58A44 107 aa9.64□□□□□ -0.87
CMTM3-202ENST00000424011 PLA2G1BP04054 148 aaKnown RBP9.63□□□□□ -0.87
CMTM3-202ENST00000424011 C8orf17Q9NRJ1 99 aa9.62□□□□□ -0.87
CMTM3-202ENST00000424011 IGHV6-1A0A0B4J1U7 121 aa9.61□□□□□ -0.87
CMTM3-202ENST00000424011 SMR3BP02814 79 aaPredicted RBP9.6□□□□□ -0.87
CMTM3-202ENST00000424011 PRAC1Q96KF2 57 aa9.6□□□□□ -0.87
CMTM3-202ENST00000424011 FAT1Q14517 4588 aa9.59□□□□□ -0.87
CMTM3-202ENST00000424011 HRES1P13985 223 aa9.57□□□□□ -0.88
CMTM3-202ENST00000424011 TYMSOSQ8TAI1 123 aa9.57□□□□□ -0.88
CMTM3-202ENST00000424011 H3BS24 57 aa9.57□□□□□ -0.88
CMTM3-202ENST00000424011 LINC01554Q52M75 96 aa9.56□□□□□ -0.88
CMTM3-202ENST00000424011 NOTCH2NLQ7Z3S9 236 aa9.56□□□□□ -0.88
CMTM3-202ENST00000424011 TP53AIP1Q9HCN2 124 aa9.54□□□□□ -0.88
CMTM3-202ENST00000424011 SPINK1P00995 79 aa9.52□□□□□ -0.89
CMTM3-202ENST00000424011 ADM2Q7Z4H4 148 aa9.51□□□□□ -0.89
CMTM3-202ENST00000424011 MRPL34Q9BQ48 92 aaKnown RBP9.51□□□□□ -0.89
CMTM3-202ENST00000424011 KRTAP10-4P60372 401 aaPredicted RBP9.5□□□□□ -0.89
CMTM3-202ENST00000424011 HSPG2P98160 4391 aa9.48□□□□□ -0.89
CMTM3-202ENST00000424011 PRR26Q8N8Z3 221 aa9.47□□□□□ -0.89
CMTM3-202ENST00000424011 RPS29P62273 56 aaKnown RBP9.47□□□□□ -0.89
CMTM3-202ENST00000424011 LINC00304Q8N9R0 145 aa9.45□□□□□ -0.9
CMTM3-202ENST00000424011 EPPK1P58107 5090 aaKnown RBP9.45□□□□□ -0.9
CMTM3-202ENST00000424011 RYR1P21817 5038 aa9.43□□□□□ -0.9
CMTM3-202ENST00000424011 FAM229AH3BQW9 127 aa9.42□□□□□ -0.9
CMTM3-202ENST00000424011 KIAA1109Q2LD37 5005 aa9.37□□□□□ -0.91
CMTM3-202ENST00000424011 Q5VSD8 79 aa9.36□□□□□ -0.91
CMTM3-202ENST00000424011 Q5W150 140 aa9.36□□□□□ -0.91
CMTM3-202ENST00000424011 SPATA8Q6RVD6 105 aa9.34□□□□□ -0.91
CMTM3-202ENST00000424011 KRTAP13-3Q3SY46 172 aa9.33□□□□□ -0.92
CMTM3-202ENST00000424011 PKHD1L1Q86WI1 4243 aa9.32□□□□□ -0.92
CMTM3-202ENST00000424011 KRTAP17-1Q9BYP8 105 aa9.32□□□□□ -0.92
CMTM3-202ENST00000424011 ACYP2P14621 99 aa9.31□□□□□ -0.92
CMTM3-202ENST00000424011 A0A1B0GU69 56 aa9.27□□□□□ -0.92
CMTM3-202ENST00000424011 KRTAP16-1A8MUX0 517 aa9.27□□□□□ -0.93
CMTM3-202ENST00000424011 Q8N1X5 172 aa9.27□□□□□ -0.93
CMTM3-202ENST00000424011 CSAG1Q6PB30 78 aa9.25□□□□□ -0.93
CMTM3-202ENST00000424011 RETNLBQ9BQ08 111 aa9.25□□□□□ -0.93
CMTM3-202ENST00000424011 MIR22HGQ0VDD5 57 aa9.23□□□□□ -0.93
CMTM3-202ENST00000424011 UQCR11O14957 56 aa9.21□□□□□ -0.94
CMTM3-202ENST00000424011 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
CMTM3-202ENST00000424011 LRP1Q07954 4544 aaKnown RBP9.19□□□□□ -0.94
CMTM3-202ENST00000424011 KRTAP10-8P60410 259 aa9.15□□□□□ -0.94
CMTM3-202ENST00000424011 TNXBP22105 4242 aa9.14□□□□□ -0.95
CMTM3-202ENST00000424011 FAT3Q8TDW7 4589 aa9.14□□□□□ -0.95
CMTM3-202ENST00000424011 IGKV2-30P06310 120 aa9.12□□□□□ -0.95
CMTM3-202ENST00000424011 FLG2Q5D862 2391 aaPredicted RBP9.08□□□□□ -0.96
CMTM3-202ENST00000424011 BIRC6Q9NR09 4857 aa9.08□□□□□ -0.96
CMTM3-202ENST00000424011 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
CMTM3-202ENST00000424011 KRTAP4-5Q9BYR2 181 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms