RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 BAALC-AS2P0C853 105 aa5.88□□□□□ -1.47
USP49-204ENST00000423567 BATFQ16520 125 aa5.88□□□□□ -1.47
USP49-204ENST00000423567 DSCR8Q96T75 97 aa5.88□□□□□ -1.47
USP49-204ENST00000423567 NAA38Q9BRA0 125 aaKnown RBP5.88□□□□□ -1.47
USP49-204ENST00000423567 LOC105371267A0A1B0GV96 52 aa5.87□□□□□ -1.47
USP49-204ENST00000423567 SIGMAR1Q99720 223 aa5.87□□□□□ -1.47
USP49-204ENST00000423567 VPS25Q9BRG1 176 aa5.87□□□□□ -1.47
USP49-204ENST00000423567 Q96NJ1 140 aa5.86□□□□□ -1.47
USP49-204ENST00000423567 ATP11AUNQ6ZP68 121 aa5.85□□□□□ -1.47
USP49-204ENST00000423567 C9JAW5 83 aa5.84□□□□□ -1.47
USP49-204ENST00000423567 IGKV4-1P06312 121 aa5.84□□□□□ -1.47
USP49-204ENST00000423567 C21orf62-AS1Q17RA5 79 aa5.84□□□□□ -1.47
USP49-204ENST00000423567 Q75L30 129 aa5.84□□□□□ -1.47
USP49-204ENST00000423567 TRBV20-1A0A075B6N2 111 aa5.83□□□□□ -1.48
USP49-204ENST00000423567 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
USP49-204ENST00000423567 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
USP49-204ENST00000423567 DSCR10P59022 87 aa5.8□□□□□ -1.48
USP49-204ENST00000423567 LINC00472Q9H8W2 130 aa5.8□□□□□ -1.48
USP49-204ENST00000423567 PDE6GP18545 87 aa5.79□□□□□ -1.48
USP49-204ENST00000423567 LINC00313P59037 77 aa5.79□□□□□ -1.48
USP49-204ENST00000423567 DEFB116Q30KQ4 102 aa5.79□□□□□ -1.48
USP49-204ENST00000423567 C20orf166-AS1Q96NR2 134 aa5.78□□□□□ -1.48
USP49-204ENST00000423567 LOC110117498A0A087WWA1 95 aa5.77□□□□□ -1.49
USP49-204ENST00000423567 A0A1B0GW54 56 aa5.77□□□□□ -1.49
USP49-204ENST00000423567 A8MUU9 505 aa5.77□□□□□ -1.49
USP49-204ENST00000423567 IGHV6-1A0A0B4J1U7 121 aa5.76□□□□□ -1.49
USP49-204ENST00000423567 J3KT08 172 aa5.76□□□□□ -1.49
USP49-204ENST00000423567 TAX1BP3O14907 124 aa5.76□□□□□ -1.49
USP49-204ENST00000423567 COX6B2Q6YFQ2 88 aa5.76□□□□□ -1.49
USP49-204ENST00000423567 Q6ZQT0 140 aa5.76□□□□□ -1.49
USP49-204ENST00000423567 A0A1W2PPM0 123 aa5.75□□□□□ -1.49
USP49-204ENST00000423567 C14orf132Q9NPU4 83 aa5.75□□□□□ -1.49
USP49-204ENST00000423567 C8orf87E5RJ46 101 aa5.74□□□□□ -1.49
USP49-204ENST00000423567 A0A1B0GVX0 72 aa5.73□□□□□ -1.49
USP49-204ENST00000423567 H3BT86 120 aa5.73□□□□□ -1.49
USP49-204ENST00000423567 NDUFB1O75438 58 aa5.73□□□□□ -1.49
USP49-204ENST00000423567 KRTAP19-2Q3LHN2 52 aa5.72□□□□□ -1.49
USP49-204ENST00000423567 KRTAP16-1A8MUX0 517 aa5.7□□□□□ -1.5
USP49-204ENST00000423567 NOTCH2NLQ7Z3S9 236 aa5.7□□□□□ -1.5
USP49-204ENST00000423567 SPCS1Q9Y6A9 102 aa5.7□□□□□ -1.5
USP49-204ENST00000423567 NREPQ16612 68 aa5.69□□□□□ -1.5
USP49-204ENST00000423567 COL5A1-AS1Q5SY13 56 aa5.69□□□□□ -1.5
USP49-204ENST00000423567 MTURNQ8N3F0 131 aa5.69□□□□□ -1.5
USP49-204ENST00000423567 MT1HP80294 61 aa5.68□□□□□ -1.5
USP49-204ENST00000423567 A8MWP4 228 aa5.67□□□□□ -1.5
USP49-204ENST00000423567 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
USP49-204ENST00000423567 M0R2T5 61 aa5.66□□□□□ -1.5
USP49-204ENST00000423567 C8orf17Q9NRJ1 99 aa5.64□□□□□ -1.51
USP49-204ENST00000423567 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
USP49-204ENST00000423567 IGKV3D-7A0A0C4DH55 119 aa5.62□□□□□ -1.51
USP49-204ENST00000423567 PRR15Q8IV56 129 aa5.62□□□□□ -1.51
USP49-204ENST00000423567 K7EP34 96 aa5.61□□□□□ -1.51
USP49-204ENST00000423567 ZCCHC13Q8WW36 166 aaKnown RBP5.61□□□□□ -1.51
USP49-204ENST00000423567 PCP4L1A6NKN8 68 aa5.6□□□□□ -1.51
USP49-204ENST00000423567 Q6ZVQ6 151 aa5.6□□□□□ -1.51
USP49-204ENST00000423567 FAM236DA0A1B0GTK5 79 aa5.59□□□□□ -1.51
USP49-204ENST00000423567 BPY2O14599 106 aa5.59□□□□□ -1.51
USP49-204ENST00000423567 FAM236CP0DP71 79 aa5.59□□□□□ -1.51
USP49-204ENST00000423567 GTF2H5Q6ZYL4 71 aa5.59□□□□□ -1.51
USP49-204ENST00000423567 Q8N9P0 234 aaPredicted RBP5.59□□□□□ -1.51
USP49-204ENST00000423567 RBM12B-AS1Q9P1G2 102 aa5.59□□□□□ -1.51
USP49-204ENST00000423567 TMEM254Q8TBM7 123 aa5.57□□□□□ -1.52
USP49-204ENST00000423567 K7EQZ3 153 aa5.56□□□□□ -1.52
USP49-204ENST00000423567 KRTAP10-6P60371 365 aaPredicted RBP5.56□□□□□ -1.52
USP49-204ENST00000423567 MRPL34Q9BQ48 92 aaKnown RBP5.56□□□□□ -1.52
USP49-204ENST00000423567 PRO0461Q9UI25 63 aa5.56□□□□□ -1.52
USP49-204ENST00000423567 MMP24-AS1A0A0U1RRL7 71 aa5.55□□□□□ -1.52
USP49-204ENST00000423567 hDV103S1A0JD37 113 aa5.55□□□□□ -1.52
USP49-204ENST00000423567 NDUFS5O43920 106 aa5.54□□□□□ -1.52
USP49-204ENST00000423567 HRES1P13985 223 aa5.54□□□□□ -1.52
USP49-204ENST00000423567 UBL5Q9BZL1 73 aa5.54□□□□□ -1.52
USP49-204ENST00000423567 SPINK7P58062 85 aa5.53□□□□□ -1.52
USP49-204ENST00000423567 F8W1H4 67 aa5.52□□□□□ -1.53
USP49-204ENST00000423567 MPLKIPQ8TAP9 179 aa5.51□□□□□ -1.53
USP49-204ENST00000423567 FLGP20930 4061 aaPredicted RBP5.5□□□□□ -1.53
USP49-204ENST00000423567 WFDC13Q8IUB5 93 aa5.49□□□□□ -1.53
USP49-204ENST00000423567 Q8N9L7 120 aa5.49□□□□□ -1.53
USP49-204ENST00000423567 LINC00846Q9NV44 126 aa5.49□□□□□ -1.53
USP49-204ENST00000423567 CASC2Q6XLA1 102 aa5.48□□□□□ -1.53
USP49-204ENST00000423567 ETDBQ3ZM63 59 aa5.47□□□□□ -1.53
USP49-204ENST00000423567 HCG22E2RYF7 251 aa5.44□□□□□ -1.54
USP49-204ENST00000423567 IGKV2D-30A0A075B6S6 120 aa5.42□□□□□ -1.54
USP49-204ENST00000423567 IGKV2-30P06310 120 aa5.42□□□□□ -1.54
USP49-204ENST00000423567 CXCL6P80162 114 aa5.42□□□□□ -1.54
USP49-204ENST00000423567 C7orf65Q6ZTY9 151 aa5.41□□□□□ -1.54
USP49-204ENST00000423567 Q5W150 140 aa5.39□□□□□ -1.55
USP49-204ENST00000423567 ACYP1P07311 99 aa5.38□□□□□ -1.55
USP49-204ENST00000423567 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
USP49-204ENST00000423567 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
USP49-204ENST00000423567 TP53AIP1Q9HCN2 124 aa5.35□□□□□ -1.55
USP49-204ENST00000423567 FAM240AA0A1B0GVK7 77 aa5.34□□□□□ -1.55
USP49-204ENST00000423567 H1FX-AS1Q4G0G2 97 aa5.34□□□□□ -1.55
USP49-204ENST00000423567 MT2AP02795 61 aa5.32□□□□□ -1.56
USP49-204ENST00000423567 ATP5EP2Q5VTU8 51 aa5.32□□□□□ -1.56
USP49-204ENST00000423567 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
USP49-204ENST00000423567 C4orf26Q17RF5 130 aa5.29□□□□□ -1.56
USP49-204ENST00000423567 A0A1B0GV90 55 aa5.28□□□□□ -1.56
USP49-204ENST00000423567 HIST1H4AP62805 103 aaKnown RBP5.28□□□□□ -1.56
USP49-204ENST00000423567 MT1FP04733 61 aa5.27□□□□□ -1.57
USP49-204ENST00000423567 FSIP2Q5CZC0 6907 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms