RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 GHRHP01286 108 aa8.96□□□□□ -0.98
MSH6-203ENST00000420813 J3QR89 54 aa8.95□□□□□ -0.98
MSH6-203ENST00000420813 NDUFV3P56181 108 aaKnown RBP8.95□□□□□ -0.98
MSH6-203ENST00000420813 A8MUU9 505 aa8.94□□□□□ -0.98
MSH6-203ENST00000420813 A0A087WSZ3 146 aa8.92□□□□□ -0.98
MSH6-203ENST00000420813 TMEM256-PLSCR3K7ERE1 68 aa8.92□□□□□ -0.98
MSH6-203ENST00000420813 JMJD7-PLA2G4BH0Y9G9 81 aa8.86□□□□□ -0.99
MSH6-203ENST00000420813 DSCR10P59022 87 aa8.84□□□□□ -0.99
MSH6-203ENST00000420813 A0A1W2PNM2 257 aa8.83□□□□□ -1
MSH6-203ENST00000420813 SIGMAR1Q99720 223 aa8.83□□□□□ -1
MSH6-203ENST00000420813 KRTAP9-8Q9BYQ0 159 aa8.82□□□□□ -1
MSH6-203ENST00000420813 FAM240AA0A1B0GVK7 77 aa8.81□□□□□ -1
MSH6-203ENST00000420813 C14orf132Q9NPU4 83 aa8.81□□□□□ -1
MSH6-203ENST00000420813 C21orf62-AS1Q17RA5 79 aa8.8□□□□□ -1
MSH6-203ENST00000420813 TRBV7-4A0A0J9YYF1 115 aa8.79□□□□□ -1
MSH6-203ENST00000420813 A0A1B0GV72 72 aa8.79□□□□□ -1
MSH6-203ENST00000420813 LINC00313P59037 77 aa8.79□□□□□ -1
MSH6-203ENST00000420813 LOC110117498A0A087WWA1 95 aa8.77□□□□□ -1.01
MSH6-203ENST00000420813 KRTAP16-1A8MUX0 517 aa8.77□□□□□ -1.01
MSH6-203ENST00000420813 IGKV4-1P06312 121 aa8.77□□□□□ -1.01
MSH6-203ENST00000420813 RBM3P98179 157 aaKnown RBP8.77□□□□□ -1.01
MSH6-203ENST00000420813 ACYP1P07311 99 aa8.76□□□□□ -1.01
MSH6-203ENST00000420813 PDE6GP18545 87 aa8.76□□□□□ -1.01
MSH6-203ENST00000420813 DSCR8Q96T75 97 aa8.76□□□□□ -1.01
MSH6-203ENST00000420813 VPS25Q9BRG1 176 aa8.76□□□□□ -1.01
MSH6-203ENST00000420813 FAM236DA0A1B0GTK5 79 aa8.72□□□□□ -1.01
MSH6-203ENST00000420813 CCKP06307 115 aa8.72□□□□□ -1.01
MSH6-203ENST00000420813 FAM236CP0DP71 79 aa8.72□□□□□ -1.01
MSH6-203ENST00000420813 Q6ZQT0 140 aa8.72□□□□□ -1.01
MSH6-203ENST00000420813 LINC00472Q9H8W2 130 aa8.71□□□□□ -1.02
MSH6-203ENST00000420813 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
MSH6-203ENST00000420813 MPLKIPQ8TAP9 179 aa8.7□□□□□ -1.02
MSH6-203ENST00000420813 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
MSH6-203ENST00000420813 USH2AO75445 5202 aa8.69□□□□□ -1.02
MSH6-203ENST00000420813 HRES1P13985 223 aa8.68□□□□□ -1.02
MSH6-203ENST00000420813 MT2AP02795 61 aa8.67□□□□□ -1.02
MSH6-203ENST00000420813 DEFB116Q30KQ4 102 aa8.67□□□□□ -1.02
MSH6-203ENST00000420813 SSPOA2VEC9 5147 aa8.67□□□□□ -1.02
MSH6-203ENST00000420813 IGHV6-1A0A0B4J1U7 121 aa8.66□□□□□ -1.02
MSH6-203ENST00000420813 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.65□□□□□ -1.02
MSH6-203ENST00000420813 C8orf87E5RJ46 101 aa8.63□□□□□ -1.03
MSH6-203ENST00000420813 A0A1B0GVX0 72 aa8.61□□□□□ -1.03
MSH6-203ENST00000420813 A0A1B0GW54 56 aa8.61□□□□□ -1.03
MSH6-203ENST00000420813 LINC00846Q9NV44 126 aa8.61□□□□□ -1.03
MSH6-203ENST00000420813 KRTAP9-7A8MTY7 169 aa8.6□□□□□ -1.03
MSH6-203ENST00000420813 MT1FP04733 61 aa8.6□□□□□ -1.03
MSH6-203ENST00000420813 LINC00643Q86TS7 51 aa8.6□□□□□ -1.03
MSH6-203ENST00000420813 UBL5Q9BZL1 73 aa8.59□□□□□ -1.03
MSH6-203ENST00000420813 ATP5EP2Q5VTU8 51 aa8.57□□□□□ -1.04
MSH6-203ENST00000420813 J3KT08 172 aa8.55□□□□□ -1.04
MSH6-203ENST00000420813 LCE2BO14633 110 aa8.55□□□□□ -1.04
MSH6-203ENST00000420813 MT-ATP8P03928 68 aa8.55□□□□□ -1.04
MSH6-203ENST00000420813 ZCCHC13Q8WW36 166 aaKnown RBP8.55□□□□□ -1.04
MSH6-203ENST00000420813 KRTAP9-3Q9BYQ3 159 aa8.55□□□□□ -1.04
MSH6-203ENST00000420813 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
MSH6-203ENST00000420813 Q6ZVQ6 151 aa8.53□□□□□ -1.04
MSH6-203ENST00000420813 SPINK7P58062 85 aa8.5□□□□□ -1.05
MSH6-203ENST00000420813 FCGBPQ9Y6R7 5405 aaPredicted RBP8.49□□□□□ -1.05
MSH6-203ENST00000420813 Q8N9P0 234 aaPredicted RBP8.49□□□□□ -1.05
MSH6-203ENST00000420813 KRTAP19-1Q8IUB9 90 aa8.48□□□□□ -1.05
MSH6-203ENST00000420813 IMUPQ9GZP8 106 aa8.48□□□□□ -1.05
MSH6-203ENST00000420813 NDUFB1O75438 58 aa8.47□□□□□ -1.05
MSH6-203ENST00000420813 NREPQ16612 68 aa8.47□□□□□ -1.05
MSH6-203ENST00000420813 CXCL6P80162 114 aa8.46□□□□□ -1.06
MSH6-203ENST00000420813 IGKV3D-7A0A0C4DH55 119 aa8.45□□□□□ -1.06
MSH6-203ENST00000420813 SCGB1A1P11684 91 aa8.45□□□□□ -1.06
MSH6-203ENST00000420813 A8MWP4 228 aa8.42□□□□□ -1.06
MSH6-203ENST00000420813 C8orf17Q9NRJ1 99 aa8.41□□□□□ -1.06
MSH6-203ENST00000420813 BPY2O14599 106 aa8.4□□□□□ -1.06
MSH6-203ENST00000420813 WFDC13Q8IUB5 93 aa8.39□□□□□ -1.07
MSH6-203ENST00000420813 HIST1H4AP62805 103 aaKnown RBP8.37□□□□□ -1.07
MSH6-203ENST00000420813 FAM236AA0A1B0GUQ0 79 aa8.34□□□□□ -1.07
MSH6-203ENST00000420813 FAM236BA0A1B0GV22 79 aa8.34□□□□□ -1.07
MSH6-203ENST00000420813 A0A087WVE0 104 aa8.31□□□□□ -1.08
MSH6-203ENST00000420813 KRTAP19-6Q3LI70 58 aa8.31□□□□□ -1.08
MSH6-203ENST00000420813 PRR15Q8IV56 129 aa8.31□□□□□ -1.08
MSH6-203ENST00000420813 MACF1Q9UPN3 7388 aaKnown RBP8.28□□□□□ -1.08
MSH6-203ENST00000420813 Q8N9L7 120 aa8.28□□□□□ -1.08
MSH6-203ENST00000420813 TMEM254Q8TBM7 123 aa8.28□□□□□ -1.08
MSH6-203ENST00000420813 MRPL34Q9BQ48 92 aaKnown RBP8.27□□□□□ -1.09
MSH6-203ENST00000420813 MMP24-AS1A0A0U1RRL7 71 aa8.26□□□□□ -1.09
MSH6-203ENST00000420813 K7EQZ3 153 aa8.26□□□□□ -1.09
MSH6-203ENST00000420813 ATOX1O00244 68 aa8.26□□□□□ -1.09
MSH6-203ENST00000420813 H1FX-AS1Q4G0G2 97 aa8.23□□□□□ -1.09
MSH6-203ENST00000420813 ANAPC13Q9BS18 74 aa8.23□□□□□ -1.09
MSH6-203ENST00000420813 PCP4P48539 62 aa8.22□□□□□ -1.09
MSH6-203ENST00000420813 hDV103S1A0JD37 113 aa8.21□□□□□ -1.1
MSH6-203ENST00000420813 HCG22E2RYF7 251 aa8.2□□□□□ -1.1
MSH6-203ENST00000420813 SYNE2Q8WXH0 6885 aaKnown RBP8.19□□□□□ -1.1
MSH6-203ENST00000420813 NDUFS5O43920 106 aa8.17□□□□□ -1.1
MSH6-203ENST00000420813 SMIM20Q8N5G0 67 aa8.17□□□□□ -1.1
MSH6-203ENST00000420813 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
MSH6-203ENST00000420813 IGKV2D-30A0A075B6S6 120 aa8.12□□□□□ -1.11
MSH6-203ENST00000420813 IGKV2-30P06310 120 aa8.12□□□□□ -1.11
MSH6-203ENST00000420813 CASC2Q6XLA1 102 aa8.12□□□□□ -1.11
MSH6-203ENST00000420813 TRAV7A0A075B6U4 112 aa8.11□□□□□ -1.11
MSH6-203ENST00000420813 SERP2Q8N6R1 65 aa8.11□□□□□ -1.11
MSH6-203ENST00000420813 Q5W150 140 aa8.1□□□□□ -1.11
MSH6-203ENST00000420813 COX7CP15954 63 aa8.08□□□□□ -1.12
MSH6-203ENST00000420813 UQCRQO14949 82 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms