RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 LINC00313P59037 77 aa9.4□□□□□ -0.9
EPCAM-203ENST00000419334 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.9
EPCAM-203ENST00000419334 GTF2H5Q6ZYL4 71 aa9.39□□□□□ -0.91
EPCAM-203ENST00000419334 IGHV6-1A0A0B4J1U7 121 aa9.37□□□□□ -0.91
EPCAM-203ENST00000419334 A0A1B0GVX0 72 aa9.37□□□□□ -0.91
EPCAM-203ENST00000419334 A8MUU9 505 aa9.37□□□□□ -0.91
EPCAM-203ENST00000419334 KRTAP16-1A8MUX0 517 aa9.35□□□□□ -0.91
EPCAM-203ENST00000419334 C8orf87E5RJ46 101 aa9.35□□□□□ -0.91
EPCAM-203ENST00000419334 ATP11AUNQ6ZP68 121 aa9.35□□□□□ -0.91
EPCAM-203ENST00000419334 NOTCH2NLQ7Z3S9 236 aa9.35□□□□□ -0.91
EPCAM-203ENST00000419334 NREPQ16612 68 aa9.34□□□□□ -0.91
EPCAM-203ENST00000419334 KRTAP9-2Q9BYQ4 174 aa9.34□□□□□ -0.91
EPCAM-203ENST00000419334 NDUFB1O75438 58 aa9.32□□□□□ -0.92
EPCAM-203ENST00000419334 A8MWP4 228 aa9.31□□□□□ -0.92
EPCAM-203ENST00000419334 F8W1H4 67 aa9.3□□□□□ -0.92
EPCAM-203ENST00000419334 IGKV3D-7A0A0C4DH55 119 aa9.26□□□□□ -0.93
EPCAM-203ENST00000419334 LCE2AQ5TA79 106 aaPredicted RBP9.26□□□□□ -0.93
EPCAM-203ENST00000419334 PRR15Q8IV56 129 aa9.24□□□□□ -0.93
EPCAM-203ENST00000419334 FAT4Q6V0I7 4981 aa9.24□□□□□ -0.93
EPCAM-203ENST00000419334 Q6ZVQ6 151 aa9.23□□□□□ -0.93
EPCAM-203ENST00000419334 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
EPCAM-203ENST00000419334 KRTAP19-2Q3LHN2 52 aa9.22□□□□□ -0.93
EPCAM-203ENST00000419334 ETDBQ3ZM63 59 aa9.21□□□□□ -0.94
EPCAM-203ENST00000419334 BPY2O14599 106 aa9.2□□□□□ -0.94
EPCAM-203ENST00000419334 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
EPCAM-203ENST00000419334 KRTAP9-6A0A140TA67 174 aa9.18□□□□□ -0.94
EPCAM-203ENST00000419334 LINC00846Q9NV44 126 aa9.18□□□□□ -0.94
EPCAM-203ENST00000419334 K7EQZ3 153 aa9.17□□□□□ -0.94
EPCAM-203ENST00000419334 Q8N9P0 234 aaPredicted RBP9.17□□□□□ -0.94
EPCAM-203ENST00000419334 UBL5Q9BZL1 73 aa9.16□□□□□ -0.94
EPCAM-203ENST00000419334 MMP24-AS1A0A0U1RRL7 71 aa9.15□□□□□ -0.94
EPCAM-203ENST00000419334 TMEM254Q8TBM7 123 aa9.12□□□□□ -0.95
EPCAM-203ENST00000419334 ZCCHC13Q8WW36 166 aaKnown RBP9.11□□□□□ -0.95
EPCAM-203ENST00000419334 MRPL34Q9BQ48 92 aaKnown RBP9.1□□□□□ -0.95
EPCAM-203ENST00000419334 hDV103S1A0JD37 113 aa9.09□□□□□ -0.95
EPCAM-203ENST00000419334 COX6B2Q6YFQ2 88 aa9.08□□□□□ -0.96
EPCAM-203ENST00000419334 Q8N9L7 120 aa9.08□□□□□ -0.96
EPCAM-203ENST00000419334 A0A1B0GV90 55 aa9.07□□□□□ -0.96
EPCAM-203ENST00000419334 MT1HP80294 61 aa9.05□□□□□ -0.96
EPCAM-203ENST00000419334 ACYP1P07311 99 aa9.01□□□□□ -0.97
EPCAM-203ENST00000419334 CASC2Q6XLA1 102 aa9.01□□□□□ -0.97
EPCAM-203ENST00000419334 WFDC13Q8IUB5 93 aa9.01□□□□□ -0.97
EPCAM-203ENST00000419334 FAM240AA0A1B0GVK7 77 aa9□□□□□ -0.97
EPCAM-203ENST00000419334 CXCL6P80162 114 aa9□□□□□ -0.97
EPCAM-203ENST00000419334 NDUFS5O43920 106 aa8.99□□□□□ -0.97
EPCAM-203ENST00000419334 HRES1P13985 223 aa8.99□□□□□ -0.97
EPCAM-203ENST00000419334 HCG22E2RYF7 251 aa8.96□□□□□ -0.98
EPCAM-203ENST00000419334 SPINK7P58062 85 aa8.96□□□□□ -0.98
EPCAM-203ENST00000419334 MPLKIPQ8TAP9 179 aa8.96□□□□□ -0.98
EPCAM-203ENST00000419334 RBM12B-AS1Q9P1G2 102 aa8.93□□□□□ -0.98
EPCAM-203ENST00000419334 FLGP20930 4061 aaPredicted RBP8.91□□□□□ -0.98
EPCAM-203ENST00000419334 FAM236DA0A1B0GTK5 79 aa8.89□□□□□ -0.99
EPCAM-203ENST00000419334 M0R2T5 61 aa8.89□□□□□ -0.99
EPCAM-203ENST00000419334 FAM236CP0DP71 79 aa8.89□□□□□ -0.99
EPCAM-203ENST00000419334 ATP5EP2Q5VTU8 51 aa8.88□□□□□ -0.99
EPCAM-203ENST00000419334 Q5W150 140 aa8.88□□□□□ -0.99
EPCAM-203ENST00000419334 KRTAP10-6P60371 365 aaPredicted RBP8.84□□□□□ -0.99
EPCAM-203ENST00000419334 FSIP2Q5CZC0 6907 aa8.83□□□□□ -1
EPCAM-203ENST00000419334 LORP23490 312 aaPredicted RBP8.82□□□□□ -1
EPCAM-203ENST00000419334 LCE2DQ5TA82 110 aaPredicted RBP8.82□□□□□ -1
EPCAM-203ENST00000419334 C7orf65Q6ZTY9 151 aa8.8□□□□□ -1
EPCAM-203ENST00000419334 LINC00643Q86TS7 51 aa8.8□□□□□ -1
EPCAM-203ENST00000419334 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
EPCAM-203ENST00000419334 IGKV2-30P06310 120 aa8.79□□□□□ -1
EPCAM-203ENST00000419334 TP53AIP1Q9HCN2 124 aa8.79□□□□□ -1
EPCAM-203ENST00000419334 J3QR89 54 aa8.77□□□□□ -1.01
EPCAM-203ENST00000419334 HIST1H4AP62805 103 aaKnown RBP8.76□□□□□ -1.01
EPCAM-203ENST00000419334 CRCT1Q9UGL9 99 aa8.76□□□□□ -1.01
EPCAM-203ENST00000419334 A0A087WVE0 104 aa8.66□□□□□ -1.02
EPCAM-203ENST00000419334 TRAV22A0A0B4J277 110 aa8.63□□□□□ -1.03
EPCAM-203ENST00000419334 H1FX-AS1Q4G0G2 97 aa8.62□□□□□ -1.03
EPCAM-203ENST00000419334 C4orf26Q17RF5 130 aa8.61□□□□□ -1.03
EPCAM-203ENST00000419334 KRTAP9-8Q9BYQ0 159 aa8.61□□□□□ -1.03
EPCAM-203ENST00000419334 UQCRQO14949 82 aa8.6□□□□□ -1.03
EPCAM-203ENST00000419334 K7ERU9 68 aa8.56□□□□□ -1.04
EPCAM-203ENST00000419334 LOC101927531A0A1B0GV80 90 aa8.55□□□□□ -1.04
EPCAM-203ENST00000419334 CYP4F30PQ9H0H9 118 aa8.55□□□□□ -1.04
EPCAM-203ENST00000419334 ATOX1O00244 68 aa8.53□□□□□ -1.04
EPCAM-203ENST00000419334 H0Y9P7 68 aa8.52□□□□□ -1.05
EPCAM-203ENST00000419334 MT2AP02795 61 aa8.51□□□□□ -1.05
EPCAM-203ENST00000419334 OCR1Q9BZK8 76 aa8.51□□□□□ -1.05
EPCAM-203ENST00000419334 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
EPCAM-203ENST00000419334 C1orf64Q8NEQ6 169 aa8.49□□□□□ -1.05
EPCAM-203ENST00000419334 IMUPQ9GZP8 106 aa8.47□□□□□ -1.05
EPCAM-203ENST00000419334 MT1FP04733 61 aa8.45□□□□□ -1.06
EPCAM-203ENST00000419334 MT-ATP8P03928 68 aa8.43□□□□□ -1.06
EPCAM-203ENST00000419334 SCGB1A1P11684 91 aa8.41□□□□□ -1.06
EPCAM-203ENST00000419334 MP68P56378 58 aa8.41□□□□□ -1.06
EPCAM-203ENST00000419334 KRTAP10-10P60014 251 aa8.41□□□□□ -1.06
EPCAM-203ENST00000419334 C5orf47Q569G3 176 aa8.41□□□□□ -1.06
EPCAM-203ENST00000419334 LINC00208Q96KT6 92 aa8.41□□□□□ -1.06
EPCAM-203ENST00000419334 S4R3F8 94 aa8.39□□□□□ -1.07
EPCAM-203ENST00000419334 H3BPC8 53 aa8.35□□□□□ -1.07
EPCAM-203ENST00000419334 LCA10Q71F78 164 aa8.33□□□□□ -1.08
EPCAM-203ENST00000419334 KRTAP9-3Q9BYQ3 159 aa8.33□□□□□ -1.08
EPCAM-203ENST00000419334 KLKP1Q107X0 134 aa8.32□□□□□ -1.08
EPCAM-203ENST00000419334 FAM236AA0A1B0GUQ0 79 aa8.3□□□□□ -1.08
EPCAM-203ENST00000419334 FAM236BA0A1B0GV22 79 aa8.3□□□□□ -1.08
EPCAM-203ENST00000419334 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
EPCAM-203ENST00000419334 A8MUN3 132 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms