RNA–Protein interactions for RNA: ENST00000419180.6

NPIPB3-201, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-201ENST00000419180 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.67
NPIPB3-201ENST00000419180 KRTAP4-9Q9BYQ8 210 aa4.65□□□□□ -1.67
NPIPB3-201ENST00000419180 IGLV10-54A0A075B6I4 117 aa4.64□□□□□ -1.67
NPIPB3-201ENST00000419180 H3BPC8 53 aa4.64□□□□□ -1.67
NPIPB3-201ENST00000419180 RNASE3P12724 160 aaKnown RBP4.64□□□□□ -1.67
NPIPB3-201ENST00000419180 COX6A2Q02221 97 aa4.64□□□□□ -1.67
NPIPB3-201ENST00000419180 FAM74A4Q5TZK3 123 aa4.64□□□□□ -1.67
NPIPB3-201ENST00000419180 C15orf56Q8N910 161 aa4.64□□□□□ -1.67
NPIPB3-201ENST00000419180 PRR34Q9NV39 138 aa4.64□□□□□ -1.67
NPIPB3-201ENST00000419180 PPP1R17O96001 155 aa4.63□□□□□ -1.67
NPIPB3-201ENST00000419180 BAALC-AS2P0C853 105 aa4.63□□□□□ -1.67
NPIPB3-201ENST00000419180 Q1RN00 199 aa4.63□□□□□ -1.67
NPIPB3-201ENST00000419180 OBSCN-AS1Q96MR7 158 aa4.63□□□□□ -1.67
NPIPB3-201ENST00000419180 HIGD1CA8MV81 97 aa4.62□□□□□ -1.67
NPIPB3-201ENST00000419180 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.62□□□□□ -1.67
NPIPB3-201ENST00000419180 NTM-AS1Q6ZSK4 140 aa4.62□□□□□ -1.67
NPIPB3-201ENST00000419180 Q8NBF4 154 aa4.62□□□□□ -1.67
NPIPB3-201ENST00000419180 Q9BRP9 147 aa4.62□□□□□ -1.67
NPIPB3-201ENST00000419180 A0A096LNI7 61 aa4.61□□□□□ -1.67
NPIPB3-201ENST00000419180 TLX1NBP0CAT3 122 aa4.61□□□□□ -1.67
NPIPB3-201ENST00000419180 C20orf166-AS1Q96NR2 134 aa4.61□□□□□ -1.67
NPIPB3-201ENST00000419180 LINC00846Q9NV44 126 aa4.61□□□□□ -1.67
NPIPB3-201ENST00000419180 Q86TA4 180 aa4.6□□□□□ -1.67
NPIPB3-201ENST00000419180 MIR7-3HGQ8N6C7 128 aa4.6□□□□□ -1.67
NPIPB3-201ENST00000419180 RPL36ALQ969Q0 106 aaKnown RBP4.6□□□□□ -1.67
NPIPB3-201ENST00000419180 AMELXQ99217 191 aa4.6□□□□□ -1.67
NPIPB3-201ENST00000419180 PRR15LQ9BU68 103 aa4.6□□□□□ -1.67
NPIPB3-201ENST00000419180 TRBV10-1A0A0K0K1A3 114 aa4.59□□□□□ -1.67
NPIPB3-201ENST00000419180 A0A1B0GUT8 65 aa4.59□□□□□ -1.67
NPIPB3-201ENST00000419180 F8VRH5 84 aa4.59□□□□□ -1.67
NPIPB3-201ENST00000419180 ORMDL1Q9P0S3 153 aa4.59□□□□□ -1.67
NPIPB3-201ENST00000419180 TRBV6-5A0A0K0K1A5 114 aa4.58□□□□□ -1.68
NPIPB3-201ENST00000419180 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
NPIPB3-201ENST00000419180 NREPQ16612 68 aa4.58□□□□□ -1.68
NPIPB3-201ENST00000419180 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
NPIPB3-201ENST00000419180 TMEM167BQ9NRX6 74 aa4.58□□□□□ -1.68
NPIPB3-201ENST00000419180 NDUFB1O75438 58 aa4.57□□□□□ -1.68
NPIPB3-201ENST00000419180 SMIM29Q86T20 159 aa4.57□□□□□ -1.68
NPIPB3-201ENST00000419180 UBL5Q9BZL1 73 aa4.57□□□□□ -1.68
NPIPB3-201ENST00000419180 A8MUU9 505 aa4.56□□□□□ -1.68
NPIPB3-201ENST00000419180 HIGD2BQ4VC39 106 aa4.56□□□□□ -1.68
NPIPB3-201ENST00000419180 KRTAP1-4P0C5Y4 121 aa4.55□□□□□ -1.68
NPIPB3-201ENST00000419180 P0C880 135 aa4.55□□□□□ -1.68
NPIPB3-201ENST00000419180 LINC01547P58512 204 aaPredicted RBP4.55□□□□□ -1.68
NPIPB3-201ENST00000419180 CSAG1Q6PB30 78 aa4.55□□□□□ -1.68
NPIPB3-201ENST00000419180 LINC01558Q9Y6Z2 57 aa4.55□□□□□ -1.68
NPIPB3-201ENST00000419180 GVQW2A0A096LPI5 108 aaPredicted RBP4.54□□□□□ -1.68
NPIPB3-201ENST00000419180 A0A1W2PNM2 257 aa4.54□□□□□ -1.68
NPIPB3-201ENST00000419180 IGIPA6NJ69 53 aa4.54□□□□□ -1.68
NPIPB3-201ENST00000419180 LINC00483Q53H64 154 aa4.54□□□□□ -1.68
NPIPB3-201ENST00000419180 C1orf137Q5JT78 98 aa4.54□□□□□ -1.68
NPIPB3-201ENST00000419180 SPAG11BQ08648 103 aa4.53□□□□□ -1.68
NPIPB3-201ENST00000419180 SPAG11AQ6PDA7 123 aa4.53□□□□□ -1.68
NPIPB3-201ENST00000419180 IGLV4-60A0A075B6I1 120 aa4.52□□□□□ -1.69
NPIPB3-201ENST00000419180 TRBV6-1A0A0K0K1D8 114 aa4.52□□□□□ -1.69
NPIPB3-201ENST00000419180 I3L3M4 83 aa4.52□□□□□ -1.69
NPIPB3-201ENST00000419180 IGLV7-43P04211 117 aa4.52□□□□□ -1.69
NPIPB3-201ENST00000419180 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
NPIPB3-201ENST00000419180 LINC00167Q96N53 147 aa4.52□□□□□ -1.69
NPIPB3-201ENST00000419180 A0A1W2PNN7 141 aa4.51□□□□□ -1.69
NPIPB3-201ENST00000419180 JMJD7-PLA2G4BH0Y9G9 81 aa4.51□□□□□ -1.69
NPIPB3-201ENST00000419180 SPANXA2-OT1Q8N9U9 137 aa4.51□□□□□ -1.69
NPIPB3-201ENST00000419180 A0A1B0GUV1 79 aa4.5□□□□□ -1.69
NPIPB3-201ENST00000419180 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
NPIPB3-201ENST00000419180 H3BQ85 93 aa4.49□□□□□ -1.69
NPIPB3-201ENST00000419180 ARL14EPLP0DKL9 152 aa4.49□□□□□ -1.69
NPIPB3-201ENST00000419180 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
NPIPB3-201ENST00000419180 ZCCHC13Q8WW36 166 aaKnown RBP4.48□□□□□ -1.69
NPIPB3-201ENST00000419180 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
NPIPB3-201ENST00000419180 IGLV7-46A0A075B6I9 117 aa4.47□□□□□ -1.69
NPIPB3-201ENST00000419180 COX7B2Q8TF08 81 aa4.47□□□□□ -1.69
NPIPB3-201ENST00000419180 LINC00208Q96KT6 92 aa4.47□□□□□ -1.69
NPIPB3-201ENST00000419180 IGKV3OR2-268A0A0C4DH90 116 aa4.46□□□□□ -1.7
NPIPB3-201ENST00000419180 CRIP1P50238 77 aa4.46□□□□□ -1.7
NPIPB3-201ENST00000419180 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
NPIPB3-201ENST00000419180 KRTAP11-1Q8IUC1 163 aa4.46□□□□□ -1.7
NPIPB3-201ENST00000419180 KRTAP4-1Q9BYQ7 146 aa4.44□□□□□ -1.7
NPIPB3-201ENST00000419180 PDE6GP18545 87 aa4.43□□□□□ -1.7
NPIPB3-201ENST00000419180 SSPOA2VEC9 5147 aa4.43□□□□□ -1.7
NPIPB3-201ENST00000419180 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
NPIPB3-201ENST00000419180 M0QY20 66 aa4.42□□□□□ -1.7
NPIPB3-201ENST00000419180 H0YGX0 51 aa4.41□□□□□ -1.7
NPIPB3-201ENST00000419180 Q8N377 158 aa4.41□□□□□ -1.7
NPIPB3-201ENST00000419180 USH2AO75445 5202 aa4.41□□□□□ -1.7
NPIPB3-201ENST00000419180 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.71
NPIPB3-201ENST00000419180 HIGD2AQ9BW72 106 aa4.4□□□□□ -1.71
NPIPB3-201ENST00000419180 SYNE2Q8WXH0 6885 aaKnown RBP4.39□□□□□ -1.71
NPIPB3-201ENST00000419180 IGLV4-69A0A075B6H9 119 aa4.39□□□□□ -1.71
NPIPB3-201ENST00000419180 A0A1B0GU33 70 aa4.39□□□□□ -1.71
NPIPB3-201ENST00000419180 FAM168BA1KXE4 195 aa4.39□□□□□ -1.71
NPIPB3-201ENST00000419180 H0Y9P7 68 aa4.39□□□□□ -1.71
NPIPB3-201ENST00000419180 MT1HP80294 61 aa4.39□□□□□ -1.71
NPIPB3-201ENST00000419180 TYMSOSQ8TAI1 123 aa4.39□□□□□ -1.71
NPIPB3-201ENST00000419180 UQCR11O14957 56 aa4.38□□□□□ -1.71
NPIPB3-201ENST00000419180 MGPP08493 103 aa4.38□□□□□ -1.71
NPIPB3-201ENST00000419180 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
NPIPB3-201ENST00000419180 LINC00959A0A1B0GUT2 108 aa4.37□□□□□ -1.71
NPIPB3-201ENST00000419180 Q5W150 140 aa4.37□□□□□ -1.71
NPIPB3-201ENST00000419180 SPRR4Q96PI1 79 aa4.37□□□□□ -1.71
NPIPB3-201ENST00000419180 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms