RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 TNCP24821 2201 aa0.56□□□□□ -2.32
PTPRC-207ENST00000418674 LMTK2Q8IWU2 1503 aa0.55□□□□□ -2.32
PTPRC-207ENST00000418674 CDC42BPGQ6DT37 1551 aa0.55□□□□□ -2.32
PTPRC-207ENST00000418674 FXYD6Q9H0Q3 95 aa0.55□□□□□ -2.32
PTPRC-207ENST00000418674 C4AP0C0L4 1744 aa0.55□□□□□ -2.32
PTPRC-207ENST00000418674 C4BP0C0L5 1744 aa0.55□□□□□ -2.32
PTPRC-207ENST00000418674 ERICH3Q5RHP9 1530 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 MUC12Q9UKN1 5478 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 DIP2AQ14689 1571 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 INO80Q9ULG1 1556 aaPredicted RBP0.54□□□□□ -2.32
PTPRC-207ENST00000418674 SACSQ9NZJ4 4579 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 NHSQ6T4R5 1651 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 CCL22O00626 93 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 PRH1P02810 166 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 Q5BKY6 102 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 HEPN1Q6WQI6 88 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 DEFB105AQ8NG35 78 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 APLNQ9ULZ1 77 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 TJP1Q07157 1748 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 APC2O95996 2303 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 ANKRD50Q9ULJ7 1429 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 ASXL1Q8IXJ9 1541 aa0.54□□□□□ -2.32
PTPRC-207ENST00000418674 CCDC180Q9P1Z9 1646 aa0.53□□□□□ -2.32
PTPRC-207ENST00000418674 LCE6AA0A183 80 aa0.53□□□□□ -2.32
PTPRC-207ENST00000418674 HMGA1P17096 107 aaKnown RBP0.53□□□□□ -2.32
PTPRC-207ENST00000418674 DEFB109BQ30KR1 87 aa0.53□□□□□ -2.32
PTPRC-207ENST00000418674 KRTAP2-1Q9BYU5 128 aa0.53□□□□□ -2.32
PTPRC-207ENST00000418674 HILPDAQ9Y5L2 63 aa0.53□□□□□ -2.32
PTPRC-207ENST00000418674 USH2AO75445 5202 aa0.53□□□□□ -2.33
PTPRC-207ENST00000418674 EFCAB5A4FU69 1503 aa0.53□□□□□ -2.33
PTPRC-207ENST00000418674 CPS1P31327 1500 aa0.53□□□□□ -2.33
PTPRC-207ENST00000418674 ANK2Q01484 3957 aa0.53□□□□□ -2.33
PTPRC-207ENST00000418674 PKHD1P08F94 4074 aa0.52□□□□□ -2.33
PTPRC-207ENST00000418674 CACNA1EQ15878 2313 aa0.52□□□□□ -2.33
PTPRC-207ENST00000418674 SMIM31A0A1B0GVY4 71 aa0.52□□□□□ -2.33
PTPRC-207ENST00000418674 NDUFA4O00483 81 aa0.52□□□□□ -2.33
PTPRC-207ENST00000418674 SMR3AQ99954 134 aa0.52□□□□□ -2.33
PTPRC-207ENST00000418674 MYCBP2O75592 4640 aa0.51□□□□□ -2.33
PTPRC-207ENST00000418674 SPINK1P00995 79 aa0.51□□□□□ -2.33
PTPRC-207ENST00000418674 KLK9Q2XQG4 91 aa0.51□□□□□ -2.33
PTPRC-207ENST00000418674 CSMD3Q7Z407 3707 aa0.51□□□□□ -2.33
PTPRC-207ENST00000418674 DNAH1Q9P2D7 4330 aa0.5□□□□□ -2.33
PTPRC-207ENST00000418674 SPINK4O60575 86 aa0.5□□□□□ -2.33
PTPRC-207ENST00000418674 H1FX-AS1Q4G0G2 97 aa0.5□□□□□ -2.33
PTPRC-207ENST00000418674 GNG13Q9P2W3 67 aa0.5□□□□□ -2.33
PTPRC-207ENST00000418674 DYNC2H1Q8NCM8 4307 aaKnown RBP0.5□□□□□ -2.33
PTPRC-207ENST00000418674 HSPG2P98160 4391 aa0.5□□□□□ -2.33
PTPRC-207ENST00000418674 HECTD4Q9Y4D8 3996 aa0.49□□□□□ -2.33
PTPRC-207ENST00000418674 ATXN8Q156A1 80 aa0.49□□□□□ -2.33
PTPRC-207ENST00000418674 CDKN2A-AS1Q9UH64 79 aa0.49□□□□□ -2.33
PTPRC-207ENST00000418674 SPTBN1Q01082 2364 aaKnown RBP0.49□□□□□ -2.33
PTPRC-207ENST00000418674 PKD1P98161 4303 aa0.48□□□□□ -2.33
PTPRC-207ENST00000418674 EEA1Q15075 1411 aa0.48□□□□□ -2.33
PTPRC-207ENST00000418674 LRP1Q07954 4544 aaKnown RBP0.48□□□□□ -2.33
PTPRC-207ENST00000418674 LELP1Q5T871 98 aa0.48□□□□□ -2.33
PTPRC-207ENST00000418674 COX6B2Q6YFQ2 88 aa0.48□□□□□ -2.33
PTPRC-207ENST00000418674 LRP1BQ9NZR2 4599 aa0.48□□□□□ -2.33
PTPRC-207ENST00000418674 CMYA5Q8N3K9 4069 aa0.48□□□□□ -2.33
PTPRC-207ENST00000418674 DNAH7Q8WXX0 4024 aa0.48□□□□□ -2.33
PTPRC-207ENST00000418674 LRP2P98164 4655 aa0.48□□□□□ -2.33
PTPRC-207ENST00000418674 HFM1A2PYH4 1435 aa0.47□□□□□ -2.33
PTPRC-207ENST00000418674 ADCY10Q96PN6 1610 aa0.47□□□□□ -2.33
PTPRC-207ENST00000418674 RNF17Q9BXT8 1623 aaKnown RBP0.47□□□□□ -2.33
PTPRC-207ENST00000418674 NDUFA3O95167 84 aa0.47□□□□□ -2.33
PTPRC-207ENST00000418674 ENHOQ6UWT2 76 aa0.47□□□□□ -2.33
PTPRC-207ENST00000418674 TRRAPQ9Y4A5 3859 aa0.47□□□□□ -2.33
PTPRC-207ENST00000418674 DNAH9Q9NYC9 4486 aa0.46□□□□□ -2.34
PTPRC-207ENST00000418674 PREX2Q70Z35 1606 aa0.46□□□□□ -2.34
PTPRC-207ENST00000418674 DYNC1H1Q14204 4646 aaKnown RBP0.46□□□□□ -2.34
PTPRC-207ENST00000418674 WFDC13Q8IUB5 93 aa0.46□□□□□ -2.34
PTPRC-207ENST00000418674 U3KQA8 63 aa0.46□□□□□ -2.34
PTPRC-207ENST00000418674 C3P01024 1663 aa0.46□□□□□ -2.34
PTPRC-207ENST00000418674 ABCA6Q8N139 1617 aa0.46□□□□□ -2.34
PTPRC-207ENST00000418674 PKDREJQ9NTG1 2253 aa0.45□□□□□ -2.34
PTPRC-207ENST00000418674 TIAM1Q13009 1591 aa0.45□□□□□ -2.34
PTPRC-207ENST00000418674 A0A087WWC5 75 aa0.45□□□□□ -2.34
PTPRC-207ENST00000418674 UBL5Q9BZL1 73 aa0.45□□□□□ -2.34
PTPRC-207ENST00000418674 ANK3Q12955 4377 aaKnown RBP0.44□□□□□ -2.34
PTPRC-207ENST00000418674 STARD9Q9P2P6 4700 aa0.44□□□□□ -2.34
PTPRC-207ENST00000418674 KIAA0586Q9BVV6 1533 aa0.43□□□□□ -2.34
PTPRC-207ENST00000418674 HRNRQ86YZ3 2850 aaPredicted RBP0.43□□□□□ -2.34
PTPRC-207ENST00000418674 ALMS1Q8TCU4 4167 aa0.43□□□□□ -2.34
PTPRC-207ENST00000418674 MRPL33O75394 65 aaKnown RBP0.43□□□□□ -2.34
PTPRC-207ENST00000418674 C3orf79P0CE67 100 aa0.43□□□□□ -2.34
PTPRC-207ENST00000418674 KCNQ1DNQ9H478 68 aa0.43□□□□□ -2.34
PTPRC-207ENST00000418674 FAT2Q9NYQ8 4349 aa0.43□□□□□ -2.34
PTPRC-207ENST00000418674 DEPDC5O75140 1603 aa0.42□□□□□ -2.34
PTPRC-207ENST00000418674 PLXNC1O60486 1568 aa0.42□□□□□ -2.34
PTPRC-207ENST00000418674 DEFB131BA0A096LNP1 70 aa0.42□□□□□ -2.34
PTPRC-207ENST00000418674 LINC00158P58513 81 aa0.42□□□□□ -2.34
PTPRC-207ENST00000418674 S100ZQ8WXG8 99 aa0.42□□□□□ -2.34
PTPRC-207ENST00000418674 FAT1Q14517 4588 aa0.42□□□□□ -2.34
PTPRC-207ENST00000418674 PLECQ15149 4684 aaKnown RBP0.42□□□□□ -2.34
PTPRC-207ENST00000418674 LINC01549A6NIU2 74 aa0.41□□□□□ -2.34
PTPRC-207ENST00000418674 LOC730098B7Z3J9 87 aa0.41□□□□□ -2.34
PTPRC-207ENST00000418674 LY75O60449 1722 aa0.41□□□□□ -2.34
PTPRC-207ENST00000418674 ALS2Q96Q42 1657 aa0.4□□□□□ -2.34
PTPRC-207ENST00000418674 PKHD1L1Q86WI1 4243 aa0.4□□□□□ -2.35
PTPRC-207ENST00000418674 GLI2P10070 1586 aa0.4□□□□□ -2.35
PTPRC-207ENST00000418674 AKAP6Q13023 2319 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms