RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 UBE2D4Q9Y2X8 147 aa1.68□□□□□ -2.14
RFC4-205ENST00000418288 HILPDAQ9Y5L2 63 aa1.68□□□□□ -2.14
RFC4-205ENST00000418288 USF3Q68DE3 2245 aa1.68□□□□□ -2.14
RFC4-205ENST00000418288 CEBPZOSA8MTT3 80 aa1.67□□□□□ -2.14
RFC4-205ENST00000418288 KRTAP12-4P60329 112 aa1.67□□□□□ -2.14
RFC4-205ENST00000418288 Q6JHZ5 121 aa1.67□□□□□ -2.14
RFC4-205ENST00000418288 DEFB107AQ8IZN7 70 aa1.67□□□□□ -2.14
RFC4-205ENST00000418288 DEFB119Q8N690 84 aa1.67□□□□□ -2.14
RFC4-205ENST00000418288 SRRM2Q9UQ35 2752 aaKnown RBP1.67□□□□□ -2.14
RFC4-205ENST00000418288 PLCE1Q9P212 2302 aa1.67□□□□□ -2.14
RFC4-205ENST00000418288 KRTAP20-1Q3LI63 56 aa1.66□□□□□ -2.14
RFC4-205ENST00000418288 C10orf113Q5VZT2 155 aa1.66□□□□□ -2.14
RFC4-205ENST00000418288 MACF1Q9UPN3 7388 aaKnown RBP1.66□□□□□ -2.14
RFC4-205ENST00000418288 WNK2Q9Y3S1 2297 aa1.65□□□□□ -2.14
RFC4-205ENST00000418288 K7EIL1 84 aa1.65□□□□□ -2.15
RFC4-205ENST00000418288 HSPG2P98160 4391 aa1.65□□□□□ -2.15
RFC4-205ENST00000418288 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
RFC4-205ENST00000418288 LYNX1P0DP58 116 aa1.64□□□□□ -2.15
RFC4-205ENST00000418288 IFI27P40305 119 aaPredicted RBP1.64□□□□□ -2.15
RFC4-205ENST00000418288 FXYD6-FXYD2A0A087WZ82 144 aa1.63□□□□□ -2.15
RFC4-205ENST00000418288 H0Y9P7 68 aa1.63□□□□□ -2.15
RFC4-205ENST00000418288 DEFB109BQ30KR1 87 aa1.63□□□□□ -2.15
RFC4-205ENST00000418288 ATP5EP2Q5VTU8 51 aa1.63□□□□□ -2.15
RFC4-205ENST00000418288 SORL1Q92673 2214 aa1.63□□□□□ -2.15
RFC4-205ENST00000418288 DNAH9Q9NYC9 4486 aa1.63□□□□□ -2.15
RFC4-205ENST00000418288 HUWE1Q7Z6Z7 4374 aaKnown RBP1.62□□□□□ -2.15
RFC4-205ENST00000418288 TRBV7-4A0A0J9YYF1 115 aa1.62□□□□□ -2.15
RFC4-205ENST00000418288 H3BVH4 76 aa1.62□□□□□ -2.15
RFC4-205ENST00000418288 FAT2Q9NYQ8 4349 aa1.62□□□□□ -2.15
RFC4-205ENST00000418288 KRTAP12-3P60328 96 aa1.61□□□□□ -2.15
RFC4-205ENST00000418288 FXYD6Q9H0Q3 95 aa1.61□□□□□ -2.15
RFC4-205ENST00000418288 SNRPGP15A8MWD9 76 aa1.6□□□□□ -2.15
RFC4-205ENST00000418288 S100A3P33764 101 aa1.6□□□□□ -2.15
RFC4-205ENST00000418288 FAM103A1Q9BTL3 118 aaKnown RBP1.6□□□□□ -2.15
RFC4-205ENST00000418288 GNG13Q9P2W3 67 aa1.6□□□□□ -2.15
RFC4-205ENST00000418288 A0A0D9SFI3 127 aa1.59□□□□□ -2.15
RFC4-205ENST00000418288 HMGA1P17096 107 aaKnown RBP1.59□□□□□ -2.15
RFC4-205ENST00000418288 CD52P31358 61 aa1.59□□□□□ -2.15
RFC4-205ENST00000418288 HAMPP81172 84 aa1.59□□□□□ -2.15
RFC4-205ENST00000418288 ATXN8Q156A1 80 aa1.59□□□□□ -2.15
RFC4-205ENST00000418288 DYNC1H1Q14204 4646 aaKnown RBP1.59□□□□□ -2.16
RFC4-205ENST00000418288 DNAH10Q8IVF4 4471 aa1.58□□□□□ -2.16
RFC4-205ENST00000418288 DNAH7Q8WXX0 4024 aa1.58□□□□□ -2.16
RFC4-205ENST00000418288 LELP1Q5T871 98 aa1.58□□□□□ -2.16
RFC4-205ENST00000418288 MYCBP2O75592 4640 aa1.57□□□□□ -2.16
RFC4-205ENST00000418288 TRBV6-1A0A0K0K1D8 114 aa1.57□□□□□ -2.16
RFC4-205ENST00000418288 A0A1B0GUT8 65 aa1.57□□□□□ -2.16
RFC4-205ENST00000418288 IFI6P09912 130 aa1.56□□□□□ -2.16
RFC4-205ENST00000418288 LINC00959A0A1B0GUT2 108 aa1.55□□□□□ -2.16
RFC4-205ENST00000418288 Q6ZSA8 131 aa1.55□□□□□ -2.16
RFC4-205ENST00000418288 LRP2P98164 4655 aa1.54□□□□□ -2.16
RFC4-205ENST00000418288 PLECQ15149 4684 aaKnown RBP1.54□□□□□ -2.16
RFC4-205ENST00000418288 LINC01549A6NIU2 74 aa1.54□□□□□ -2.16
RFC4-205ENST00000418288 A0A1B0GU69 56 aa1.53□□□□□ -2.16
RFC4-205ENST00000418288 FAT1Q14517 4588 aa1.53□□□□□ -2.16
RFC4-205ENST00000418288 DNAH11Q96DT5 4516 aa1.53□□□□□ -2.16
RFC4-205ENST00000418288 PKHD1L1Q86WI1 4243 aa1.53□□□□□ -2.16
RFC4-205ENST00000418288 TRAV21A0A0B4J279 112 aa1.52□□□□□ -2.17
RFC4-205ENST00000418288 NREPQ16612 68 aa1.52□□□□□ -2.17
RFC4-205ENST00000418288 NCBP2-AS2Q69YL0 99 aa1.52□□□□□ -2.17
RFC4-205ENST00000418288 STARD9Q9P2P6 4700 aa1.52□□□□□ -2.17
RFC4-205ENST00000418288 DNAH3Q8TD57 4116 aa1.52□□□□□ -2.17
RFC4-205ENST00000418288 ALMS1Q8TCU4 4167 aa1.51□□□□□ -2.17
RFC4-205ENST00000418288 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
RFC4-205ENST00000418288 NDUFB1O75438 58 aa1.51□□□□□ -2.17
RFC4-205ENST00000418288 ANGP03950 147 aaKnown RBP1.51□□□□□ -2.17
RFC4-205ENST00000418288 SSBP3-AS1Q7Z2R9 100 aa1.51□□□□□ -2.17
RFC4-205ENST00000418288 UBE2DNLQ8IWF7 75 aa1.51□□□□□ -2.17
RFC4-205ENST00000418288 KMT2DO14686 5537 aa1.51□□□□□ -2.17
RFC4-205ENST00000418288 FAT3Q8TDW7 4589 aa1.5□□□□□ -2.17
RFC4-205ENST00000418288 KRTAP10-4P60372 401 aaPredicted RBP1.5□□□□□ -2.17
RFC4-205ENST00000418288 TFF3Q07654 80 aa1.5□□□□□ -2.17
RFC4-205ENST00000418288 C10orf95Q9H7T3 257 aa1.5□□□□□ -2.17
RFC4-205ENST00000418288 DNAH6Q9C0G6 4158 aa1.49□□□□□ -2.17
RFC4-205ENST00000418288 FXYD6P3P58550 94 aa1.49□□□□□ -2.17
RFC4-205ENST00000418288 DEFB112Q30KQ8 113 aa1.49□□□□□ -2.17
RFC4-205ENST00000418288 TOMM5Q8N4H5 51 aa1.49□□□□□ -2.17
RFC4-205ENST00000418288 U3KQA8 63 aa1.49□□□□□ -2.17
RFC4-205ENST00000418288 VPS13DQ5THJ4 4388 aa1.48□□□□□ -2.17
RFC4-205ENST00000418288 KRTAP2-3P0C7H8 128 aa1.48□□□□□ -2.17
RFC4-205ENST00000418288 LCE3AQ5TA76 89 aa1.48□□□□□ -2.17
RFC4-205ENST00000418288 WFDC9Q8NEX5 89 aa1.48□□□□□ -2.17
RFC4-205ENST00000418288 KRTAP2-4Q9BYR9 128 aa1.48□□□□□ -2.17
RFC4-205ENST00000418288 ENHOQ6UWT2 76 aa1.47□□□□□ -2.17
RFC4-205ENST00000418288 NMES1Q9C002 83 aa1.47□□□□□ -2.17
RFC4-205ENST00000418288 CMC2Q9NRP2 79 aa1.47□□□□□ -2.17
RFC4-205ENST00000418288 USH2AO75445 5202 aa1.47□□□□□ -2.17
RFC4-205ENST00000418288 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
RFC4-205ENST00000418288 LRP1BQ9NZR2 4599 aa1.46□□□□□ -2.18
RFC4-205ENST00000418288 K7EMI3 77 aa1.46□□□□□ -2.18
RFC4-205ENST00000418288 STATHP02808 62 aa1.46□□□□□ -2.18
RFC4-205ENST00000418288 PRH1P02810 166 aa1.46□□□□□ -2.18
RFC4-205ENST00000418288 SPINK9Q5DT21 86 aa1.46□□□□□ -2.18
RFC4-205ENST00000418288 GAFA1Q96PS6 74 aa1.46□□□□□ -2.18
RFC4-205ENST00000418288 MUC12Q9UKN1 5478 aa1.46□□□□□ -2.18
RFC4-205ENST00000418288 APOBP04114 4563 aaKnown RBP1.46□□□□□ -2.18
RFC4-205ENST00000418288 VPS13BQ7Z7G8 4022 aa1.45□□□□□ -2.18
RFC4-205ENST00000418288 HRNRQ86YZ3 2850 aaPredicted RBP1.45□□□□□ -2.18
RFC4-205ENST00000418288 I3L2K1 104 aa1.45□□□□□ -2.18
RFC4-205ENST00000418288 FCER1GP30273 86 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms