RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 COX7BP24311 80 aa3.46□□□□□ -1.86
ECHDC1-206ENST00000417628 LINC00242Q5T6M2 205 aa3.46□□□□□ -1.86
ECHDC1-206ENST00000417628 RETNLBQ9BQ08 111 aa3.46□□□□□ -1.86
ECHDC1-206ENST00000417628 TRGV2A0A075B6R0 118 aa3.45□□□□□ -1.86
ECHDC1-206ENST00000417628 IGHV3-53P01767 116 aa3.45□□□□□ -1.86
ECHDC1-206ENST00000417628 CSNK1G2-AS1Q8NCQ2 148 aa3.45□□□□□ -1.86
ECHDC1-206ENST00000417628 CDKN2A-AS1Q9UH64 79 aa3.45□□□□□ -1.86
ECHDC1-206ENST00000417628 S4R3C0 116 aa3.45□□□□□ -1.86
ECHDC1-206ENST00000417628 RPL37AP8A6NKH3 93 aa3.44□□□□□ -1.86
ECHDC1-206ENST00000417628 NDUFA4O00483 81 aa3.44□□□□□ -1.86
ECHDC1-206ENST00000417628 Q6ZTI0 123 aa3.44□□□□□ -1.86
ECHDC1-206ENST00000417628 LPAP08519 4548 aa3.44□□□□□ -1.86
ECHDC1-206ENST00000417628 IGHV3-21A0A0B4J1V1 117 aa3.43□□□□□ -1.86
ECHDC1-206ENST00000417628 APELAP0DMC3 54 aa3.43□□□□□ -1.86
ECHDC1-206ENST00000417628 C14orf177Q52M58 125 aa3.43□□□□□ -1.86
ECHDC1-206ENST00000417628 PRR9Q5T870 116 aa3.43□□□□□ -1.86
ECHDC1-206ENST00000417628 CIRBP-AS1Q8TBR5 109 aa3.43□□□□□ -1.86
ECHDC1-206ENST00000417628 COX7B2Q8TF08 81 aa3.43□□□□□ -1.86
ECHDC1-206ENST00000417628 IGLV4-60A0A075B6I1 120 aa3.42□□□□□ -1.86
ECHDC1-206ENST00000417628 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
ECHDC1-206ENST00000417628 IGHV3-23P01764 117 aa3.42□□□□□ -1.86
ECHDC1-206ENST00000417628 DEFB131AP59861 70 aa3.42□□□□□ -1.86
ECHDC1-206ENST00000417628 REG3GQ6UW15 175 aa3.42□□□□□ -1.86
ECHDC1-206ENST00000417628 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-206ENST00000417628 LINC00575Q6W349 94 aa3.42□□□□□ -1.86
ECHDC1-206ENST00000417628 KRTAP7-1Q8IUC3 87 aa3.42□□□□□ -1.86
ECHDC1-206ENST00000417628 CHCHD7Q9BUK0 85 aa3.42□□□□□ -1.86
ECHDC1-206ENST00000417628 ZNF706Q9Y5V0 76 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-206ENST00000417628 IGKV3-7A0A075B6H7 116 aa3.41□□□□□ -1.86
ECHDC1-206ENST00000417628 IGHV3OR16-8A0A075B7F1 116 aa3.41□□□□□ -1.86
ECHDC1-206ENST00000417628 Q8N377 158 aa3.41□□□□□ -1.86
ECHDC1-206ENST00000417628 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-206ENST00000417628 IGHV3OR16-12A0A075B7B8 117 aa3.4□□□□□ -1.87
ECHDC1-206ENST00000417628 IGHV3-35A0A0C4DH35 117 aa3.4□□□□□ -1.87
ECHDC1-206ENST00000417628 LRCOL1A6NCL2 159 aa3.4□□□□□ -1.87
ECHDC1-206ENST00000417628 KRTAP16-1A8MUX0 517 aa3.4□□□□□ -1.87
ECHDC1-206ENST00000417628 IGHV3-66A0A0C4DH42 116 aa3.39□□□□□ -1.87
ECHDC1-206ENST00000417628 COX17Q14061 63 aa3.39□□□□□ -1.87
ECHDC1-206ENST00000417628 RNASE13Q5GAN3 156 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-206ENST00000417628 CHCHD10Q8WYQ3 142 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-206ENST00000417628 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
ECHDC1-206ENST00000417628 LINC00612Q8N6U2 182 aa3.38□□□□□ -1.87
ECHDC1-206ENST00000417628 H0Y9P7 68 aa3.37□□□□□ -1.87
ECHDC1-206ENST00000417628 MT3P25713 68 aa3.37□□□□□ -1.87
ECHDC1-206ENST00000417628 ROMO1P60602 79 aa3.37□□□□□ -1.87
ECHDC1-206ENST00000417628 SPAG11BQ08648 103 aa3.37□□□□□ -1.87
ECHDC1-206ENST00000417628 COA5Q86WW8 74 aa3.37□□□□□ -1.87
ECHDC1-206ENST00000417628 C9orf163Q8N9P6 203 aa3.37□□□□□ -1.87
ECHDC1-206ENST00000417628 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
ECHDC1-206ENST00000417628 A0A1W2PNM2 257 aa3.36□□□□□ -1.87
ECHDC1-206ENST00000417628 DEFB130BP0DP73 79 aa3.36□□□□□ -1.87
ECHDC1-206ENST00000417628 DEFB130AP0DP74 79 aa3.36□□□□□ -1.87
ECHDC1-206ENST00000417628 RHPN1-AS1Q9BWJ2 59 aa3.36□□□□□ -1.87
ECHDC1-206ENST00000417628 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
ECHDC1-206ENST00000417628 LINC00158P58513 81 aa3.35□□□□□ -1.87
ECHDC1-206ENST00000417628 COX6A2Q02221 97 aa3.35□□□□□ -1.87
ECHDC1-206ENST00000417628 HIGD2BQ4VC39 106 aa3.35□□□□□ -1.87
ECHDC1-206ENST00000417628 Q6ZQY7 126 aa3.35□□□□□ -1.87
ECHDC1-206ENST00000417628 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-206ENST00000417628 IGHV3OR16-13A0A075B7E8 117 aa3.34□□□□□ -1.87
ECHDC1-206ENST00000417628 A0A087WSZ3 146 aa3.34□□□□□ -1.87
ECHDC1-206ENST00000417628 Q8IZM0 81 aa3.34□□□□□ -1.87
ECHDC1-206ENST00000417628 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
ECHDC1-206ENST00000417628 DHRS4-AS1Q9P1J3 65 aa3.34□□□□□ -1.87
ECHDC1-206ENST00000417628 PRR4Q16378 134 aa3.33□□□□□ -1.88
ECHDC1-206ENST00000417628 SPATA8Q6RVD6 105 aa3.33□□□□□ -1.88
ECHDC1-206ENST00000417628 TRGV4A0A0C4DH28 118 aa3.32□□□□□ -1.88
ECHDC1-206ENST00000417628 A8MTW9 85 aa3.32□□□□□ -1.88
ECHDC1-206ENST00000417628 H3BNG1 76 aa3.32□□□□□ -1.88
ECHDC1-206ENST00000417628 IGLV6-57P01721 117 aa3.32□□□□□ -1.88
ECHDC1-206ENST00000417628 SPINK7P58062 85 aa3.32□□□□□ -1.88
ECHDC1-206ENST00000417628 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
ECHDC1-206ENST00000417628 SPAG11AQ6PDA7 123 aa3.32□□□□□ -1.88
ECHDC1-206ENST00000417628 IGLV5-48A0A075B6I7 105 aa3.31□□□□□ -1.88
ECHDC1-206ENST00000417628 IGHV3-74A0A0B4J1X5 117 aa3.31□□□□□ -1.88
ECHDC1-206ENST00000417628 IGKV2D-24A0A075B6R9 120 aa3.3□□□□□ -1.88
ECHDC1-206ENST00000417628 ST20-AS1Q8NBB2 130 aa3.3□□□□□ -1.88
ECHDC1-206ENST00000417628 Q8NDZ9 215 aa3.3□□□□□ -1.88
ECHDC1-206ENST00000417628 SPRR4Q96PI1 79 aa3.3□□□□□ -1.88
ECHDC1-206ENST00000417628 A0A096LPF7 62 aa3.29□□□□□ -1.88
ECHDC1-206ENST00000417628 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-206ENST00000417628 CSAG1Q6PB30 78 aa3.28□□□□□ -1.88
ECHDC1-206ENST00000417628 ADM2Q7Z4H4 148 aa3.28□□□□□ -1.88
ECHDC1-206ENST00000417628 Q8N9L7 120 aa3.28□□□□□ -1.88
ECHDC1-206ENST00000417628 LINC00959A0A1B0GUT2 108 aa3.27□□□□□ -1.89
ECHDC1-206ENST00000417628 UQCR11O14957 56 aa3.27□□□□□ -1.89
ECHDC1-206ENST00000417628 DSCR10P59022 87 aa3.27□□□□□ -1.89
ECHDC1-206ENST00000417628 C1orf137Q5JT78 98 aa3.27□□□□□ -1.89
ECHDC1-206ENST00000417628 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
ECHDC1-206ENST00000417628 WFDC10BQ8IUB3 73 aa3.26□□□□□ -1.89
ECHDC1-206ENST00000417628 PRR34Q9NV39 138 aa3.26□□□□□ -1.89
ECHDC1-206ENST00000417628 NEBP20929 6669 aa3.26□□□□□ -1.89
ECHDC1-206ENST00000417628 IGLV10-54A0A075B6I4 117 aa3.25□□□□□ -1.89
ECHDC1-206ENST00000417628 GVQW2A0A096LPI5 108 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-206ENST00000417628 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
ECHDC1-206ENST00000417628 FCGBPQ9Y6R7 5405 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-206ENST00000417628 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
ECHDC1-206ENST00000417628 TOMM7Q9P0U1 55 aa3.24□□□□□ -1.89
ECHDC1-206ENST00000417628 K7EQZ3 153 aa3.23□□□□□ -1.89
ECHDC1-206ENST00000417628 LINC00483Q53H64 154 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms