RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 CCKP06307 115 aa4.97□□□□□ -1.61
LINC01238-201ENST00000416204 C14orf132Q9NPU4 83 aa4.97□□□□□ -1.61
LINC01238-201ENST00000416204 TRBV7-7A0A0K0K1E9 115 aa4.96□□□□□ -1.62
LINC01238-201ENST00000416204 RBM3P98179 157 aaKnown RBP4.96□□□□□ -1.62
LINC01238-201ENST00000416204 Q6ZQY7 126 aa4.96□□□□□ -1.62
LINC01238-201ENST00000416204 LOC110117498A0A087WWA1 95 aa4.95□□□□□ -1.62
LINC01238-201ENST00000416204 DHRS4-AS1Q9P1J3 65 aa4.95□□□□□ -1.62
LINC01238-201ENST00000416204 LAMTOR3Q9UHA4 124 aa4.95□□□□□ -1.62
LINC01238-201ENST00000416204 Q6ZRX8 168 aa4.94□□□□□ -1.62
LINC01238-201ENST00000416204 A0A1B0GV72 72 aa4.93□□□□□ -1.62
LINC01238-201ENST00000416204 DSCR8Q96T75 97 aa4.93□□□□□ -1.62
LINC01238-201ENST00000416204 LIMD2Q9BT23 127 aa4.93□□□□□ -1.62
LINC01238-201ENST00000416204 RPL37P61927 97 aaKnown RBP4.92□□□□□ -1.62
LINC01238-201ENST00000416204 ATP5EP2Q5VTU8 51 aa4.92□□□□□ -1.62
LINC01238-201ENST00000416204 Q6JHZ5 121 aa4.92□□□□□ -1.62
LINC01238-201ENST00000416204 Q6ZQT0 140 aa4.92□□□□□ -1.62
LINC01238-201ENST00000416204 NDUFV3P56181 108 aaKnown RBP4.91□□□□□ -1.62
LINC01238-201ENST00000416204 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
LINC01238-201ENST00000416204 TRBV7-4A0A0J9YYF1 115 aa4.9□□□□□ -1.63
LINC01238-201ENST00000416204 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
LINC01238-201ENST00000416204 LINC00846Q9NV44 126 aa4.9□□□□□ -1.63
LINC01238-201ENST00000416204 A0A0G2JQZ4 141 aa4.89□□□□□ -1.63
LINC01238-201ENST00000416204 A0A1B0GW54 56 aa4.89□□□□□ -1.63
LINC01238-201ENST00000416204 UBL5Q9BZL1 73 aa4.89□□□□□ -1.63
LINC01238-201ENST00000416204 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
LINC01238-201ENST00000416204 IGLV5-48A0A075B6I7 105 aa4.87□□□□□ -1.63
LINC01238-201ENST00000416204 C1orf195Q5TG92 126 aa4.87□□□□□ -1.63
LINC01238-201ENST00000416204 DEFB105AQ8NG35 78 aa4.85□□□□□ -1.63
LINC01238-201ENST00000416204 HIST1H4AP62805 103 aaKnown RBP4.84□□□□□ -1.63
LINC01238-201ENST00000416204 IGKV3D-7A0A0C4DH55 119 aa4.83□□□□□ -1.64
LINC01238-201ENST00000416204 FAM236AA0A1B0GUQ0 79 aa4.83□□□□□ -1.64
LINC01238-201ENST00000416204 FAM236BA0A1B0GV22 79 aa4.83□□□□□ -1.64
LINC01238-201ENST00000416204 CXCL6P80162 114 aa4.83□□□□□ -1.64
LINC01238-201ENST00000416204 ATOX1O00244 68 aa4.82□□□□□ -1.64
LINC01238-201ENST00000416204 MT2AP02795 61 aa4.82□□□□□ -1.64
LINC01238-201ENST00000416204 SPRR1BP22528 89 aa4.82□□□□□ -1.64
LINC01238-201ENST00000416204 Q6ZVQ6 151 aa4.82□□□□□ -1.64
LINC01238-201ENST00000416204 F8WEM9 126 aa4.81□□□□□ -1.64
LINC01238-201ENST00000416204 SMIM29Q86T20 159 aa4.81□□□□□ -1.64
LINC01238-201ENST00000416204 MT1FP04733 61 aa4.79□□□□□ -1.64
LINC01238-201ENST00000416204 CD164Q04900 197 aa4.79□□□□□ -1.64
LINC01238-201ENST00000416204 NREPQ16612 68 aa4.79□□□□□ -1.64
LINC01238-201ENST00000416204 ATP11AUNQ6ZP68 121 aa4.78□□□□□ -1.64
LINC01238-201ENST00000416204 NEBP20929 6669 aa4.77□□□□□ -1.65
LINC01238-201ENST00000416204 UQCRQO14949 82 aa4.77□□□□□ -1.65
LINC01238-201ENST00000416204 SMIM20Q8N5G0 67 aa4.77□□□□□ -1.65
LINC01238-201ENST00000416204 A0A1W2PNM2 257 aa4.76□□□□□ -1.65
LINC01238-201ENST00000416204 COX7CP15954 63 aa4.76□□□□□ -1.65
LINC01238-201ENST00000416204 Q5XG85 94 aa4.76□□□□□ -1.65
LINC01238-201ENST00000416204 KRTAP9-3Q9BYQ3 159 aa4.76□□□□□ -1.65
LINC01238-201ENST00000416204 A0A087WVE0 104 aa4.75□□□□□ -1.65
LINC01238-201ENST00000416204 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
LINC01238-201ENST00000416204 SERP2Q8N6R1 65 aa4.75□□□□□ -1.65
LINC01238-201ENST00000416204 CCDC179H3BU77 68 aa4.74□□□□□ -1.65
LINC01238-201ENST00000416204 BPY2O14599 106 aa4.74□□□□□ -1.65
LINC01238-201ENST00000416204 IGFL1Q6UW32 110 aa4.73□□□□□ -1.65
LINC01238-201ENST00000416204 Q75L30 129 aa4.72□□□□□ -1.65
LINC01238-201ENST00000416204 TRAV7A0A075B6U4 112 aa4.7□□□□□ -1.66
LINC01238-201ENST00000416204 IGKV4-1P06312 121 aa4.7□□□□□ -1.66
LINC01238-201ENST00000416204 Q96NJ1 140 aa4.7□□□□□ -1.66
LINC01238-201ENST00000416204 FAM236DA0A1B0GTK5 79 aa4.69□□□□□ -1.66
LINC01238-201ENST00000416204 FAM236CP0DP71 79 aa4.69□□□□□ -1.66
LINC01238-201ENST00000416204 MUC12Q9UKN1 5478 aa4.69□□□□□ -1.66
LINC01238-201ENST00000416204 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
LINC01238-201ENST00000416204 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
LINC01238-201ENST00000416204 C20orf166-AS1Q96NR2 134 aa4.67□□□□□ -1.66
LINC01238-201ENST00000416204 A0A087WSZ3 146 aa4.66□□□□□ -1.66
LINC01238-201ENST00000416204 H3BS24 57 aa4.66□□□□□ -1.66
LINC01238-201ENST00000416204 J3KT08 172 aa4.65□□□□□ -1.67
LINC01238-201ENST00000416204 DSCR10P59022 87 aa4.65□□□□□ -1.67
LINC01238-201ENST00000416204 SS18L2Q9UHA2 77 aa4.64□□□□□ -1.67
LINC01238-201ENST00000416204 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
LINC01238-201ENST00000416204 TMEM258P61165 79 aa4.62□□□□□ -1.67
LINC01238-201ENST00000416204 KLKP1Q107X0 134 aa4.62□□□□□ -1.67
LINC01238-201ENST00000416204 Q8N9L7 120 aa4.62□□□□□ -1.67
LINC01238-201ENST00000416204 LINC00472Q9H8W2 130 aa4.62□□□□□ -1.67
LINC01238-201ENST00000416204 HCG22E2RYF7 251 aa4.61□□□□□ -1.67
LINC01238-201ENST00000416204 K7EQZ3 153 aa4.61□□□□□ -1.67
LINC01238-201ENST00000416204 NDUFC1O43677 76 aa4.61□□□□□ -1.67
LINC01238-201ENST00000416204 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
LINC01238-201ENST00000416204 A8MUU9 505 aa4.6□□□□□ -1.67
LINC01238-201ENST00000416204 A8MWP4 228 aa4.6□□□□□ -1.67
LINC01238-201ENST00000416204 PRR15Q8IV56 129 aa4.6□□□□□ -1.67
LINC01238-201ENST00000416204 C20orf197Q8N268 126 aa4.6□□□□□ -1.67
LINC01238-201ENST00000416204 NDUFB1O75438 58 aa4.59□□□□□ -1.67
LINC01238-201ENST00000416204 HRES1P13985 223 aa4.57□□□□□ -1.68
LINC01238-201ENST00000416204 C5orf47Q569G3 176 aa4.57□□□□□ -1.68
LINC01238-201ENST00000416204 TMEM254Q8TBM7 123 aa4.57□□□□□ -1.68
LINC01238-201ENST00000416204 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
LINC01238-201ENST00000416204 RBM12B-AS1Q9P1G2 102 aa4.56□□□□□ -1.68
LINC01238-201ENST00000416204 H7BZZ5 65 aa4.55□□□□□ -1.68
LINC01238-201ENST00000416204 ATP5EP56381 51 aaPredicted RBP4.55□□□□□ -1.68
LINC01238-201ENST00000416204 DEFB116Q30KQ4 102 aa4.55□□□□□ -1.68
LINC01238-201ENST00000416204 Q8N9P0 234 aaPredicted RBP4.55□□□□□ -1.68
LINC01238-201ENST00000416204 MPLKIPQ8TAP9 179 aa4.55□□□□□ -1.68
LINC01238-201ENST00000416204 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
LINC01238-201ENST00000416204 H3BPC8 53 aa4.54□□□□□ -1.68
LINC01238-201ENST00000416204 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
LINC01238-201ENST00000416204 CASC2Q6XLA1 102 aa4.54□□□□□ -1.68
LINC01238-201ENST00000416204 MDN1Q9NU22 5596 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms