RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 MMP24-AS1A0A0U1RRL7 71 aa7.94□□□□□ -1.14
SCN1B-202ENST00000415950 KRTAP1-5Q9BYS1 174 aa7.93□□□□□ -1.14
SCN1B-202ENST00000415950 Q75L30 129 aa7.93□□□□□ -1.14
SCN1B-202ENST00000415950 A0A1B0GU33 70 aa7.92□□□□□ -1.14
SCN1B-202ENST00000415950 A8MU10 97 aa7.91□□□□□ -1.14
SCN1B-202ENST00000415950 SPINK7P58062 85 aa7.91□□□□□ -1.14
SCN1B-202ENST00000415950 BSNQ9UPA5 3926 aa7.89□□□□□ -1.15
SCN1B-202ENST00000415950 LINC01558Q9Y6Z2 57 aa7.88□□□□□ -1.15
SCN1B-202ENST00000415950 LINC00472Q9H8W2 130 aa7.88□□□□□ -1.15
SCN1B-202ENST00000415950 TENM2Q9NT68 2774 aa7.84□□□□□ -1.15
SCN1B-202ENST00000415950 KRTAP4-16G5E9R7 235 aaPredicted RBP7.84□□□□□ -1.16
SCN1B-202ENST00000415950 CSAG1Q6PB30 78 aa7.84□□□□□ -1.16
SCN1B-202ENST00000415950 H3BS24 57 aa7.83□□□□□ -1.16
SCN1B-202ENST00000415950 PANO1I0J062 215 aa7.82□□□□□ -1.16
SCN1B-202ENST00000415950 LUZP6Q538Z0 58 aa7.81□□□□□ -1.16
SCN1B-202ENST00000415950 ZFHX3Q15911 3703 aa7.81□□□□□ -1.16
SCN1B-202ENST00000415950 Q5W150 140 aa7.79□□□□□ -1.16
SCN1B-202ENST00000415950 KRTAP11-1Q8IUC1 163 aa7.79□□□□□ -1.16
SCN1B-202ENST00000415950 KRTAP7-1Q8IUC3 87 aa7.78□□□□□ -1.16
SCN1B-202ENST00000415950 ZCCHC13Q8WW36 166 aaKnown RBP7.78□□□□□ -1.16
SCN1B-202ENST00000415950 CAMK2N1Q7Z7J9 78 aa7.77□□□□□ -1.17
SCN1B-202ENST00000415950 OTOGQ6ZRI0 2925 aa7.76□□□□□ -1.17
SCN1B-202ENST00000415950 A0A087X002 238 aa7.76□□□□□ -1.17
SCN1B-202ENST00000415950 NOTCH2NLQ7Z3S9 236 aa7.76□□□□□ -1.17
SCN1B-202ENST00000415950 SRRM2Q9UQ35 2752 aaKnown RBP7.75□□□□□ -1.17
SCN1B-202ENST00000415950 TGP01266 2768 aa7.75□□□□□ -1.17
SCN1B-202ENST00000415950 KRTAP29-1A8MX34 341 aaPredicted RBP7.74□□□□□ -1.17
SCN1B-202ENST00000415950 Q6ZSA8 131 aa7.73□□□□□ -1.17
SCN1B-202ENST00000415950 SPRR1BP22528 89 aa7.71□□□□□ -1.18
SCN1B-202ENST00000415950 NBPF19A0A087WUL8 3843 aa7.7□□□□□ -1.18
SCN1B-202ENST00000415950 PLAC8Q9NZF1 115 aa7.69□□□□□ -1.18
SCN1B-202ENST00000415950 DMAC1Q96GE9 116 aa7.64□□□□□ -1.19
SCN1B-202ENST00000415950 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
SCN1B-202ENST00000415950 KRTAP21-3Q3LHN1 58 aa7.58□□□□□ -1.2
SCN1B-202ENST00000415950 LCE6AA0A183 80 aa7.57□□□□□ -1.2
SCN1B-202ENST00000415950 SPATA8Q6RVD6 105 aa7.57□□□□□ -1.2
SCN1B-202ENST00000415950 S4R3F8 94 aa7.57□□□□□ -1.2
SCN1B-202ENST00000415950 R4GN34 69 aa7.56□□□□□ -1.2
SCN1B-202ENST00000415950 RPL37P61927 97 aaKnown RBP7.55□□□□□ -1.2
SCN1B-202ENST00000415950 M0R2T5 61 aa7.54□□□□□ -1.2
SCN1B-202ENST00000415950 Q6ZR54 194 aa7.54□□□□□ -1.2
SCN1B-202ENST00000415950 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
SCN1B-202ENST00000415950 VPS13CQ709C8 3753 aa7.53□□□□□ -1.2
SCN1B-202ENST00000415950 KRTAP10-1P60331 282 aa7.52□□□□□ -1.21
SCN1B-202ENST00000415950 LINC00483Q53H64 154 aa7.49□□□□□ -1.21
SCN1B-202ENST00000415950 ROMO1P60602 79 aa7.49□□□□□ -1.21
SCN1B-202ENST00000415950 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
SCN1B-202ENST00000415950 TRRAPQ9Y4A5 3859 aa7.48□□□□□ -1.21
SCN1B-202ENST00000415950 A6NN06 94 aa7.48□□□□□ -1.21
SCN1B-202ENST00000415950 FBN3Q75N90 2809 aa7.46□□□□□ -1.22
SCN1B-202ENST00000415950 A0A0A0MQY5 61 aa7.45□□□□□ -1.22
SCN1B-202ENST00000415950 M0QZ58 72 aa7.43□□□□□ -1.22
SCN1B-202ENST00000415950 COL7A1Q02388 2944 aa7.4□□□□□ -1.23
SCN1B-202ENST00000415950 Q6ZRN7 208 aaPredicted RBP7.36□□□□□ -1.23
SCN1B-202ENST00000415950 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
SCN1B-202ENST00000415950 Q5VSD8 79 aa7.33□□□□□ -1.24
SCN1B-202ENST00000415950 KRTAP13-2Q52LG2 175 aa7.29□□□□□ -1.24
SCN1B-202ENST00000415950 CSMD3Q7Z407 3707 aa7.27□□□□□ -1.25
SCN1B-202ENST00000415950 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
SCN1B-202ENST00000415950 KRTAP25-1Q3LHN0 102 aa7.26□□□□□ -1.25
SCN1B-202ENST00000415950 ASB16-AS1Q495Z4 193 aa7.26□□□□□ -1.25
SCN1B-202ENST00000415950 MEGF8Q7Z7M0 2845 aa7.25□□□□□ -1.25
SCN1B-202ENST00000415950 NDUFAF8A1L188 74 aa7.24□□□□□ -1.25
SCN1B-202ENST00000415950 KRTAP16-1A8MUX0 517 aa7.21□□□□□ -1.26
SCN1B-202ENST00000415950 AKAP9Q99996 3911 aa7.12□□□□□ -1.27
SCN1B-202ENST00000415950 A8MUU9 505 aa7.11□□□□□ -1.27
SCN1B-202ENST00000415950 ZNF469Q96JG9 3925 aaPredicted RBP7.1□□□□□ -1.27
SCN1B-202ENST00000415950 PLAC4Q8WY50 150 aa7.07□□□□□ -1.28
SCN1B-202ENST00000415950 C20orf166-AS1Q96NR2 134 aa7.02□□□□□ -1.29
SCN1B-202ENST00000415950 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
SCN1B-202ENST00000415950 H0YAA0 97 aa6.97□□□□□ -1.29
SCN1B-202ENST00000415950 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
SCN1B-202ENST00000415950 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
SCN1B-202ENST00000415950 ANK3Q12955 4377 aaKnown RBP6.94□□□□□ -1.3
SCN1B-202ENST00000415950 KRTAP13-3Q3SY46 172 aa6.88□□□□□ -1.31
SCN1B-202ENST00000415950 TNP1P09430 55 aa6.83□□□□□ -1.32
SCN1B-202ENST00000415950 KRTAP3-3Q9BYR6 98 aa6.8□□□□□ -1.32
SCN1B-202ENST00000415950 KRTAP3-2Q9BYR7 98 aa6.8□□□□□ -1.32
SCN1B-202ENST00000415950 KRTAP10-8P60410 259 aa6.76□□□□□ -1.33
SCN1B-202ENST00000415950 P0C880 135 aa6.74□□□□□ -1.33
SCN1B-202ENST00000415950 A0A1B0GVY2 172 aa6.71□□□□□ -1.34
SCN1B-202ENST00000415950 XP32Q5T750 250 aa6.71□□□□□ -1.34
SCN1B-202ENST00000415950 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
SCN1B-202ENST00000415950 PP632Q6XCG6 107 aa6.58□□□□□ -1.36
SCN1B-202ENST00000415950 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
SCN1B-202ENST00000415950 TPRXLQ17RH7 258 aa6.5□□□□□ -1.37
SCN1B-202ENST00000415950 KRTAP12-2P59991 146 aa6.49□□□□□ -1.37
SCN1B-202ENST00000415950 ANK2Q01484 3957 aa6.46□□□□□ -1.38
SCN1B-202ENST00000415950 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
SCN1B-202ENST00000415950 DNAH10Q8IVF4 4471 aa6.44□□□□□ -1.38
SCN1B-202ENST00000415950 HUWE1Q7Z6Z7 4374 aaKnown RBP6.44□□□□□ -1.38
SCN1B-202ENST00000415950 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
SCN1B-202ENST00000415950 KRTAP10-6P60371 365 aaPredicted RBP6.36□□□□□ -1.39
SCN1B-202ENST00000415950 DNAH1Q9P2D7 4330 aa6.36□□□□□ -1.39
SCN1B-202ENST00000415950 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
SCN1B-202ENST00000415950 CMYA5Q8N3K9 4069 aa6.32□□□□□ -1.4
SCN1B-202ENST00000415950 DNAH11Q96DT5 4516 aa6.29□□□□□ -1.4
SCN1B-202ENST00000415950 DNAH3Q8TD57 4116 aa6.29□□□□□ -1.4
SCN1B-202ENST00000415950 PLECQ15149 4684 aaKnown RBP6.27□□□□□ -1.41
SCN1B-202ENST00000415950 LYSTQ99698 3801 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms