RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 ARFGEF2Q9Y6D5 1785 aa-0.32□□□□□ -2.46
TRAPPC13-203ENST00000415825 APOBP04114 4563 aaKnown RBP-0.32□□□□□ -2.46
TRAPPC13-203ENST00000415825 DNAH12Q6ZR08 3092 aa-0.32□□□□□ -2.46
TRAPPC13-203ENST00000415825 SZT2Q5T011 3432 aa-0.32□□□□□ -2.46
TRAPPC13-203ENST00000415825 LOC400499M0QZD8 3231 aa-0.32□□□□□ -2.46
TRAPPC13-203ENST00000415825 VPS13CQ709C8 3753 aa-0.32□□□□□ -2.46
TRAPPC13-203ENST00000415825 CCNB3Q8WWL7 1395 aa-0.32□□□□□ -2.46
TRAPPC13-203ENST00000415825 PLIN4Q96Q06 1357 aa-0.32□□□□□ -2.46
TRAPPC13-203ENST00000415825 MYH4Q9Y623 1939 aa-0.32□□□□□ -2.46
TRAPPC13-203ENST00000415825 MYO5CQ9NQX4 1742 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 UNC13AQ9UPW8 1703 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 DYNC1H1Q14204 4646 aaKnown RBP-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 URB2Q14146 1524 aaKnown RBP-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 CFAP47Q6ZTR5 3102 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 MROH2AA6NES4 1674 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 CENPFP49454 3210 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 PZPP20742 1482 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 MYOM2P54296 1465 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 CC2D2AQ9P2K1 1620 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 MUC3AQ02505 3323 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 TRBV25-1A0A075B6N4 114 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 FAM24AA6NFZ4 105 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 M0QY20 66 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 CYB5AP00167 134 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 IFI6P09912 130 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 IAPPP10997 89 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 ASIPP42127 132 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 LINC00158P58513 81 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 PMCHL1Q16048 86 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 DEFB106AQ8N104 65 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 SERP2Q8N6R1 65 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 TRGV9Q99603 122 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 UNC80Q8N2C7 3258 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 EEA1Q15075 1411 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 RGPD1P0DJD0 1748 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 TJP1Q07157 1748 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 NEXMIFQ5QGS0 1516 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 CLASP1Q7Z460 1538 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 C3P01024 1663 aa-0.33□□□□□ -2.46
TRAPPC13-203ENST00000415825 MED14O60244 1454 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 DEFB131BA0A096LNP1 70 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 C7orf77A4D0Y5 90 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 EFCAB10A6NFE3 127 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 CRYM-AS1A6NIL9 109 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 TMEM262E9PQX1 116 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 ACYP1P07311 99 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 UQCRHP07919 91 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 S100A1P23297 94 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 GNG4P50150 75 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 PPP3R1P63098 170 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 MRPS10P82664 201 aaKnown RBP-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 DIP2AQ14689 1571 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 ZNF720Q7Z2F6 126 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 ACBD7Q8N6N7 88 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 CACFD1Q9UGQ2 172 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 FAM208AQ9UK61 1670 aaKnown RBP-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 LMTK2Q8IWU2 1503 aa-0.34□□□□□ -2.46
TRAPPC13-203ENST00000415825 KIF21BO75037 1637 aa-0.35□□□□□ -2.46
TRAPPC13-203ENST00000415825 ANKRD26Q9UPS8 1709 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 CFAP74Q9C0B2 1584 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 CEP162Q5TB80 1403 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 A0A1B0GUT8 65 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 TMEM218A2RU14 115 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 ATOX1O00244 68 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 DEFB4AO15263 64 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 NDUFA3O95167 84 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 LINC00032P0C843 101 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 IGLC2P0DOY2 106 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 IGLC3P0DOY3 106 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 DEFB130BP0DP73 79 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 DEFB130AP0DP74 79 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 SMIM11AP58511 58 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 WT1-ASQ06250 92 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 PLGLAQ15195 96 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 ETDBQ3ZM63 59 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 ATP5EP2Q5VTU8 51 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 DEFB107AQ8IZN7 70 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 SVBPQ8N300 66 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 LEAP2Q969E1 77 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 DPY30Q9C005 99 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 GNG8Q9UK08 70 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 ABCC3O15438 1527 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 CCDC180Q9P1Z9 1646 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 DNAH10Q8IVF4 4471 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 ARHGAP35Q9NRY4 1499 aa-0.35□□□□□ -2.47
TRAPPC13-203ENST00000415825 TIAM1Q13009 1591 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 CROCC2H7BZ55 1655 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 LMO7Q8WWI1 1683 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 RRBP1Q9P2E9 1410 aaKnown RBP-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 ZFYVE16Q7Z3T8 1539 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 ASXL1Q8IXJ9 1541 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 KDM5DQ9BY66 1539 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 UQCRHLA0A096LP55 91 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 PVALEFA0A1B0GWK0 134 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 D6R8Y8 96 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 MT-ATP8P03928 68 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 SPART-AS1P0CW21 52 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 IFI27P40305 119 aaPredicted RBP-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 DEFB114Q30KQ6 69 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 MUSTN1Q8IVN3 82 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms