RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 IGHV3-33P01772 117 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 IGHV3-30-5P0DP03 117 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 COX7B2Q8TF08 81 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 COPS9Q8WXC6 57 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 SRRM2Q9UQ35 2752 aaKnown RBP1.37□□□□□ -2.19
MCF2-204ENST00000414978 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.37□□□□□ -2.19
MCF2-204ENST00000414978 IGKV4-1P06312 121 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 SFTA2Q6UW10 78 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 GTF2H5Q6ZYL4 71 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 ZNF625Q96I27 306 aaPredicted RBP1.37□□□□□ -2.19
MCF2-204ENST00000414978 SPANXDQ9BXN6 97 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 SPANXCQ9NY87 97 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 IFITM1P13164 125 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 KRTAP10-1P60331 282 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 MUSTN1Q8IVN3 82 aa1.37□□□□□ -2.19
MCF2-204ENST00000414978 A0A1W2PPM0 123 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 FUSP35637 526 aaKnown RBP eCLIP1.36□□□□□ -2.19
MCF2-204ENST00000414978 LINC00158P58513 81 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 KRTAP12-2P59991 146 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 NPC2P61916 151 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 WFDC10BQ8IUB3 73 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 PRO1854Q9UHT4 67 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 SPCS1Q9Y6A9 102 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 CCL18P55774 89 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 Q8IZM0 81 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 LAMTOR3Q9UHA4 124 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 IBA57-AS1B1ANH7 110 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 K7EP34 96 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 LINC01556Q5JQF7 62 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 S100A7L2Q5SY68 101 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 IGFL1Q6UW32 110 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 ENHOQ6UWT2 76 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 LINC00308Q8TCZ7 52 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 C20orf166-AS1Q96NR2 134 aa1.36□□□□□ -2.19
MCF2-204ENST00000414978 SPAG11BQ08648 103 aa1.35□□□□□ -2.19
MCF2-204ENST00000414978 KRTAP13-2Q52LG2 175 aa1.35□□□□□ -2.19
MCF2-204ENST00000414978 UBE2DNLQ8IWF7 75 aa1.35□□□□□ -2.19
MCF2-204ENST00000414978 A0A1B0GW54 56 aa1.35□□□□□ -2.19
MCF2-204ENST00000414978 C2orf82Q6UX34 121 aa1.35□□□□□ -2.19
MCF2-204ENST00000414978 COX6CP09669 75 aa1.35□□□□□ -2.19
MCF2-204ENST00000414978 Q8N814 137 aa1.35□□□□□ -2.19
MCF2-204ENST00000414978 TRBV20-1A0A075B6N2 111 aa1.34□□□□□ -2.19
MCF2-204ENST00000414978 TRAV13-2A0A0B4J235 113 aa1.34□□□□□ -2.19
MCF2-204ENST00000414978 COX17Q14061 63 aa1.34□□□□□ -2.19
MCF2-204ENST00000414978 LINC00526Q96FQ7 95 aa1.34□□□□□ -2.19
MCF2-204ENST00000414978 TRBV30A0A0K0K1B3 111 aa1.34□□□□□ -2.2
MCF2-204ENST00000414978 F8W1H4 67 aa1.34□□□□□ -2.2
MCF2-204ENST00000414978 M0R2N4 97 aa1.34□□□□□ -2.2
MCF2-204ENST00000414978 ATXN8Q156A1 80 aa1.34□□□□□ -2.2
MCF2-204ENST00000414978 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.2
MCF2-204ENST00000414978 TRAV23DV6A0A075B6W5 121 aa1.33□□□□□ -2.2
MCF2-204ENST00000414978 A0A087WTM6 91 aa1.33□□□□□ -2.2
MCF2-204ENST00000414978 C9orf116Q5BN46 136 aaPredicted RBP1.33□□□□□ -2.2
MCF2-204ENST00000414978 TMEM254Q8TBM7 123 aa1.33□□□□□ -2.2
MCF2-204ENST00000414978 MUC2Q02817 5179 aa1.33□□□□□ -2.2
MCF2-204ENST00000414978 GVQW2A0A096LPI5 108 aaPredicted RBP1.33□□□□□ -2.2
MCF2-204ENST00000414978 C6orf48Q9UBA6 75 aa1.33□□□□□ -2.2
MCF2-204ENST00000414978 LRP1Q07954 4544 aaKnown RBP1.33□□□□□ -2.2
MCF2-204ENST00000414978 SSPOA2VEC9 5147 aa1.33□□□□□ -2.2
MCF2-204ENST00000414978 NCR3O14931 201 aa1.32□□□□□ -2.2
MCF2-204ENST00000414978 WFDC2Q14508 124 aa1.32□□□□□ -2.2
MCF2-204ENST00000414978 TPRXLQ17RH7 258 aa1.32□□□□□ -2.2
MCF2-204ENST00000414978 LINC01600Q96MT4 127 aa1.32□□□□□ -2.2
MCF2-204ENST00000414978 ETDBQ3ZM63 59 aa1.32□□□□□ -2.2
MCF2-204ENST00000414978 SMIM11BQ8TCY0 68 aa1.32□□□□□ -2.2
MCF2-204ENST00000414978 A0A087WSZ3 146 aa1.32□□□□□ -2.2
MCF2-204ENST00000414978 H0YGX0 51 aa1.32□□□□□ -2.2
MCF2-204ENST00000414978 SNCGO76070 127 aa1.32□□□□□ -2.2
MCF2-204ENST00000414978 SPACA4Q8TDM5 124 aa1.32□□□□□ -2.2
MCF2-204ENST00000414978 TRACP01848 142 aa1.31□□□□□ -2.2
MCF2-204ENST00000414978 PPDPFLQ8WWR9 84 aa1.31□□□□□ -2.2
MCF2-204ENST00000414978 COA5Q86WW8 74 aa1.31□□□□□ -2.2
MCF2-204ENST00000414978 TRBV10-3A0A0K0K1G6 114 aa1.3□□□□□ -2.2
MCF2-204ENST00000414978 BAALC-AS2P0C853 105 aa1.3□□□□□ -2.2
MCF2-204ENST00000414978 LIMD2Q9BT23 127 aa1.3□□□□□ -2.2
MCF2-204ENST00000414978 RPL37AP61513 92 aaKnown RBP1.3□□□□□ -2.2
MCF2-204ENST00000414978 Q9BRP9 147 aa1.3□□□□□ -2.2
MCF2-204ENST00000414978 ORMDL1Q9P0S3 153 aa1.3□□□□□ -2.2
MCF2-204ENST00000414978 TEX49A0A1B0GTD5 131 aa1.29□□□□□ -2.2
MCF2-204ENST00000414978 hADV29S1A0JD25 119 aa1.29□□□□□ -2.2
MCF2-204ENST00000414978 SMR3BP02814 79 aaPredicted RBP1.29□□□□□ -2.2
MCF2-204ENST00000414978 COX7BP24311 80 aa1.29□□□□□ -2.2
MCF2-204ENST00000414978 CNBPP62633 177 aaKnown RBP1.29□□□□□ -2.2
MCF2-204ENST00000414978 LINC00575Q6W349 94 aa1.29□□□□□ -2.2
MCF2-204ENST00000414978 CDC42SE1Q9NRR8 79 aa1.29□□□□□ -2.2
MCF2-204ENST00000414978 hDV103S1A0JD37 113 aa1.29□□□□□ -2.2
MCF2-204ENST00000414978 MIR22HGQ0VDD5 57 aa1.29□□□□□ -2.2
MCF2-204ENST00000414978 CASC2Q6XLA1 102 aa1.29□□□□□ -2.2
MCF2-204ENST00000414978 KRTAP6-3Q3LI67 103 aa1.29□□□□□ -2.2
MCF2-204ENST00000414978 FLG2Q5D862 2391 aaPredicted RBP1.28□□□□□ -2.2
MCF2-204ENST00000414978 LRP2P98164 4655 aa1.28□□□□□ -2.2
MCF2-204ENST00000414978 A0A096LNI7 61 aa1.28□□□□□ -2.2
MCF2-204ENST00000414978 ETDCA0A1B0GVM5 59 aa1.28□□□□□ -2.2
MCF2-204ENST00000414978 MT-ATP8P03928 68 aa1.28□□□□□ -2.2
MCF2-204ENST00000414978 ELOF1P60002 83 aaKnown RBP1.28□□□□□ -2.2
MCF2-204ENST00000414978 KCNQ1DNQ9H478 68 aa1.28□□□□□ -2.2
MCF2-204ENST00000414978 PRO2289Q9P1D8 64 aa1.28□□□□□ -2.2
MCF2-204ENST00000414978 LINC00474Q9P2X8 69 aa1.28□□□□□ -2.2
MCF2-204ENST00000414978 C22orf24Q9Y442 160 aa1.28□□□□□ -2.2
MCF2-204ENST00000414978 UQCRQO14949 82 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms