RNA–Protein interactions for RNA: ENST00000414069.2

SPRN-201, Transcript of shadow of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRN, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRN-201ENST00000414069 CDC42SE1Q9NRR8 79 aa12.66□□□□□ -0.38
SPRN-201ENST00000414069 IGLV5-52A0A0A0MRZ9 124 aa12.64□□□□□ -0.39
SPRN-201ENST00000414069 CASC2Q6XLA1 102 aa12.64□□□□□ -0.39
SPRN-201ENST00000414069 H3BS24 57 aa12.62□□□□□ -0.39
SPRN-201ENST00000414069 A0A1B0GW54 56 aa12.61□□□□□ -0.39
SPRN-201ENST00000414069 ADM2Q7Z4H4 148 aa12.61□□□□□ -0.39
SPRN-201ENST00000414069 IGLV8-61A0A075B6I0 122 aa12.6□□□□□ -0.39
SPRN-201ENST00000414069 C1orf134Q5TEV5 83 aa12.6□□□□□ -0.39
SPRN-201ENST00000414069 KRTAP13-1Q8IUC0 172 aa12.59□□□□□ -0.39
SPRN-201ENST00000414069 HYDINQ4G0P3 5121 aa12.58□□□□□ -0.4
SPRN-201ENST00000414069 SPANXA2-OT1Q8N9U9 137 aa12.57□□□□□ -0.4
SPRN-201ENST00000414069 Q6ZR54 194 aa12.56□□□□□ -0.4
SPRN-201ENST00000414069 LINC00313P59037 77 aa12.55□□□□□ -0.4
SPRN-201ENST00000414069 SPRR1BP22528 89 aa12.55□□□□□ -0.4
SPRN-201ENST00000414069 KRTAP10-2P60368 255 aa12.52□□□□□ -0.41
SPRN-201ENST00000414069 LINC00472Q9H8W2 130 aa12.51□□□□□ -0.41
SPRN-201ENST00000414069 SPINK6Q6UWN8 80 aa12.5□□□□□ -0.41
SPRN-201ENST00000414069 DNAH5Q8TE73 4624 aa12.5□□□□□ -0.41
SPRN-201ENST00000414069 KRTAP29-1A8MX34 341 aaPredicted RBP12.5□□□□□ -0.41
SPRN-201ENST00000414069 A8MWP4 228 aa12.46□□□□□ -0.41
SPRN-201ENST00000414069 IGHV6-1A0A0B4J1U7 121 aa12.45□□□□□ -0.42
SPRN-201ENST00000414069 WWC2-AS2Q96NR7 200 aa12.44□□□□□ -0.42
SPRN-201ENST00000414069 ZNF861PO60384 105 aa12.44□□□□□ -0.42
SPRN-201ENST00000414069 CIRBP-AS1Q8TBR5 109 aa12.44□□□□□ -0.42
SPRN-201ENST00000414069 LRP1BQ9NZR2 4599 aa12.44□□□□□ -0.42
SPRN-201ENST00000414069 PLAC8Q9NZF1 115 aa12.42□□□□□ -0.42
SPRN-201ENST00000414069 IGLV7-46A0A075B6I9 117 aa12.42□□□□□ -0.42
SPRN-201ENST00000414069 LINC01558Q9Y6Z2 57 aa12.42□□□□□ -0.42
SPRN-201ENST00000414069 PRR26Q8N8Z3 221 aa12.4□□□□□ -0.43
SPRN-201ENST00000414069 ALMS1Q8TCU4 4167 aa12.38□□□□□ -0.43
SPRN-201ENST00000414069 H3BPC8 53 aa12.38□□□□□ -0.43
SPRN-201ENST00000414069 A0A087X002 238 aa12.37□□□□□ -0.43
SPRN-201ENST00000414069 NOTCH2NLQ7Z3S9 236 aa12.37□□□□□ -0.43
SPRN-201ENST00000414069 Q96NJ1 140 aa12.37□□□□□ -0.43
SPRN-201ENST00000414069 MMP24-AS1A0A0U1RRL7 71 aa12.36□□□□□ -0.43
SPRN-201ENST00000414069 HRES1P13985 223 aa12.35□□□□□ -0.43
SPRN-201ENST00000414069 IGLV7-43P04211 117 aa12.34□□□□□ -0.43
SPRN-201ENST00000414069 ZNF706Q9Y5V0 76 aaPredicted RBP12.33□□□□□ -0.44
SPRN-201ENST00000414069 LINC01554Q52M75 96 aa12.33□□□□□ -0.44
SPRN-201ENST00000414069 LINC00483Q53H64 154 aa12.32□□□□□ -0.44
SPRN-201ENST00000414069 CDK2AP2O75956 126 aa12.31□□□□□ -0.44
SPRN-201ENST00000414069 PKHD1P08F94 4074 aa12.3□□□□□ -0.44
SPRN-201ENST00000414069 KRTAP10-1P60331 282 aa12.29□□□□□ -0.44
SPRN-201ENST00000414069 C8orf17Q9NRJ1 99 aa12.26□□□□□ -0.45
SPRN-201ENST00000414069 FAT2Q9NYQ8 4349 aa12.26□□□□□ -0.45
SPRN-201ENST00000414069 VPS13BQ7Z7G8 4022 aa12.25□□□□□ -0.45
SPRN-201ENST00000414069 PKD1P98161 4303 aa12.22□□□□□ -0.45
SPRN-201ENST00000414069 A0A1B0GVX0 72 aa12.21□□□□□ -0.46
SPRN-201ENST00000414069 RETNLBQ9BQ08 111 aa12.21□□□□□ -0.46
SPRN-201ENST00000414069 CSAG1Q6PB30 78 aa12.11□□□□□ -0.47
SPRN-201ENST00000414069 MRPL34Q9BQ48 92 aaKnown RBP12.1□□□□□ -0.47
SPRN-201ENST00000414069 KRTAP13-2Q52LG2 175 aa12.1□□□□□ -0.47
SPRN-201ENST00000414069 SACSQ9NZJ4 4579 aa12.09□□□□□ -0.47
SPRN-201ENST00000414069 SMR3BP02814 79 aaPredicted RBP12.09□□□□□ -0.47
SPRN-201ENST00000414069 PLA2G1BP04054 148 aaKnown RBP12.09□□□□□ -0.47
SPRN-201ENST00000414069 FAT1Q14517 4588 aa12.07□□□□□ -0.48
SPRN-201ENST00000414069 Q5W150 140 aa12.05□□□□□ -0.48
SPRN-201ENST00000414069 TP53AIP1Q9HCN2 124 aa12.02□□□□□ -0.48
SPRN-201ENST00000414069 A0A1B0GU69 56 aa12.01□□□□□ -0.49
SPRN-201ENST00000414069 ASB16-AS1Q495Z4 193 aa12□□□□□ -0.49
SPRN-201ENST00000414069 Q6ZSA8 131 aa11.98□□□□□ -0.49
SPRN-201ENST00000414069 SSBP3-AS1Q7Z2R9 100 aa11.97□□□□□ -0.49
SPRN-201ENST00000414069 FLG2Q5D862 2391 aaPredicted RBP11.95□□□□□ -0.5
SPRN-201ENST00000414069 DYNC1H1Q14204 4646 aaKnown RBP11.94□□□□□ -0.5
SPRN-201ENST00000414069 MIR22HGQ0VDD5 57 aa11.93□□□□□ -0.5
SPRN-201ENST00000414069 KRTAP1-4P0C5Y4 121 aa11.92□□□□□ -0.5
SPRN-201ENST00000414069 ACYP2P14621 99 aa11.89□□□□□ -0.51
SPRN-201ENST00000414069 KMT2CQ8NEZ4 4911 aaKnown RBP11.89□□□□□ -0.51
SPRN-201ENST00000414069 TYMSOSQ8TAI1 123 aa11.88□□□□□ -0.51
SPRN-201ENST00000414069 SPATA8Q6RVD6 105 aa11.84□□□□□ -0.51
SPRN-201ENST00000414069 UQCR11O14957 56 aa11.81□□□□□ -0.52
SPRN-201ENST00000414069 IGKV2D-30A0A075B6S6 120 aa11.77□□□□□ -0.53
SPRN-201ENST00000414069 IGKV2-30P06310 120 aa11.77□□□□□ -0.53
SPRN-201ENST00000414069 KRTAP13-3Q3SY46 172 aa11.72□□□□□ -0.53
SPRN-201ENST00000414069 SPINK1P00995 79 aa11.69□□□□□ -0.54
SPRN-201ENST00000414069 APOBP04114 4563 aaKnown RBP11.69□□□□□ -0.54
SPRN-201ENST00000414069 C9orf92A6NGG3 77 aa11.68□□□□□ -0.54
SPRN-201ENST00000414069 CRIPTQ9P021 101 aa11.66□□□□□ -0.54
SPRN-201ENST00000414069 LINC00304Q8N9R0 145 aa11.66□□□□□ -0.54
SPRN-201ENST00000414069 FAM229AH3BQW9 127 aa11.64□□□□□ -0.55
SPRN-201ENST00000414069 DMAC1Q96GE9 116 aa11.64□□□□□ -0.55
SPRN-201ENST00000414069 DMBT1Q9UGM3 2413 aaPredicted RBP11.64□□□□□ -0.55
SPRN-201ENST00000414069 KRTAP16-1A8MUX0 517 aa11.64□□□□□ -0.55
SPRN-201ENST00000414069 RYR2Q92736 4967 aa11.64□□□□□ -0.55
SPRN-201ENST00000414069 LRP1Q07954 4544 aaKnown RBP11.61□□□□□ -0.55
SPRN-201ENST00000414069 KRTAP21-3Q3LHN1 58 aa11.55□□□□□ -0.56
SPRN-201ENST00000414069 ROMO1P60602 79 aa11.53□□□□□ -0.56
SPRN-201ENST00000414069 Q8N1X5 172 aa11.51□□□□□ -0.57
SPRN-201ENST00000414069 MYCBP2O75592 4640 aa11.5□□□□□ -0.57
SPRN-201ENST00000414069 A0A1B0GVY2 172 aa11.5□□□□□ -0.57
SPRN-201ENST00000414069 RYR3Q15413 4870 aa11.44□□□□□ -0.58
SPRN-201ENST00000414069 KRTAP25-1Q3LHN0 102 aa11.44□□□□□ -0.58
SPRN-201ENST00000414069 PKHD1L1Q86WI1 4243 aa11.43□□□□□ -0.58
SPRN-201ENST00000414069 KRTAP10-4P60372 401 aaPredicted RBP11.4□□□□□ -0.58
SPRN-201ENST00000414069 A8MUU9 505 aa11.34□□□□□ -0.59
SPRN-201ENST00000414069 KIAA1109Q2LD37 5005 aa11.32□□□□□ -0.6
SPRN-201ENST00000414069 P0C880 135 aa11.31□□□□□ -0.6
SPRN-201ENST00000414069 HSPG2P98160 4391 aa11.29□□□□□ -0.6
SPRN-201ENST00000414069 H0YAA0 97 aa11.29□□□□□ -0.6
SPRN-201ENST00000414069 Q5VSD8 79 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms