RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 DYNC2H1Q8NCM8 4307 aaKnown RBP8.68□□□□□ -1.02
SEMA3F-202ENST00000413852 Q6ZRN7 208 aaPredicted RBP8.68□□□□□ -1.02
SEMA3F-202ENST00000413852 Q75L30 129 aa8.67□□□□□ -1.02
SEMA3F-202ENST00000413852 WWC2-AS2Q96NR7 200 aa8.67□□□□□ -1.02
SEMA3F-202ENST00000413852 ASB16-AS1Q495Z4 193 aa8.67□□□□□ -1.02
SEMA3F-202ENST00000413852 SPACA4Q8TDM5 124 aa8.66□□□□□ -1.02
SEMA3F-202ENST00000413852 CDK2AP2O75956 126 aa8.66□□□□□ -1.02
SEMA3F-202ENST00000413852 MEGF8Q7Z7M0 2845 aa8.65□□□□□ -1.02
SEMA3F-202ENST00000413852 LOC101927531A0A1B0GV80 90 aa8.65□□□□□ -1.03
SEMA3F-202ENST00000413852 MRPL34Q9BQ48 92 aaKnown RBP8.65□□□□□ -1.03
SEMA3F-202ENST00000413852 Q6ZR54 194 aa8.64□□□□□ -1.03
SEMA3F-202ENST00000413852 VPS13DQ5THJ4 4388 aa8.63□□□□□ -1.03
SEMA3F-202ENST00000413852 DNAH6Q9C0G6 4158 aa8.63□□□□□ -1.03
SEMA3F-202ENST00000413852 CIRBP-AS1Q8TBR5 109 aa8.62□□□□□ -1.03
SEMA3F-202ENST00000413852 TP53AIP1Q9HCN2 124 aa8.61□□□□□ -1.03
SEMA3F-202ENST00000413852 PRKDCP78527 4128 aaKnown RBP8.6□□□□□ -1.03
SEMA3F-202ENST00000413852 LINC01558Q9Y6Z2 57 aa8.59□□□□□ -1.03
SEMA3F-202ENST00000413852 LINC00483Q53H64 154 aa8.58□□□□□ -1.04
SEMA3F-202ENST00000413852 A0A087WTM6 91 aa8.58□□□□□ -1.04
SEMA3F-202ENST00000413852 A6NN06 94 aa8.58□□□□□ -1.04
SEMA3F-202ENST00000413852 IGLV5-52A0A0A0MRZ9 124 aa8.57□□□□□ -1.04
SEMA3F-202ENST00000413852 RTL8CO15255 209 aa8.57□□□□□ -1.04
SEMA3F-202ENST00000413852 ALMS1Q8TCU4 4167 aa8.57□□□□□ -1.04
SEMA3F-202ENST00000413852 ATP11AUNQ6ZP68 121 aa8.57□□□□□ -1.04
SEMA3F-202ENST00000413852 KTN1-AS1Q86SY8 53 aa8.57□□□□□ -1.04
SEMA3F-202ENST00000413852 CDC42SE1Q9NRR8 79 aa8.56□□□□□ -1.04
SEMA3F-202ENST00000413852 PLAC8Q9NZF1 115 aa8.56□□□□□ -1.04
SEMA3F-202ENST00000413852 RBM12B-AS1Q9P1G2 102 aa8.56□□□□□ -1.04
SEMA3F-202ENST00000413852 ZNF861PO60384 105 aa8.54□□□□□ -1.04
SEMA3F-202ENST00000413852 DNAH11Q96DT5 4516 aa8.52□□□□□ -1.04
SEMA3F-202ENST00000413852 KRTAP13-3Q3SY46 172 aa8.49□□□□□ -1.05
SEMA3F-202ENST00000413852 ZNF706Q9Y5V0 76 aaPredicted RBP8.48□□□□□ -1.05
SEMA3F-202ENST00000413852 PRAC1Q96KF2 57 aa8.48□□□□□ -1.05
SEMA3F-202ENST00000413852 ADM2Q7Z4H4 148 aa8.47□□□□□ -1.05
SEMA3F-202ENST00000413852 LRP1BQ9NZR2 4599 aa8.45□□□□□ -1.06
SEMA3F-202ENST00000413852 DNAH5Q8TE73 4624 aa8.43□□□□□ -1.06
SEMA3F-202ENST00000413852 IGLV7-43P04211 117 aa8.42□□□□□ -1.06
SEMA3F-202ENST00000413852 NUPR2A6NF83 97 aa8.42□□□□□ -1.06
SEMA3F-202ENST00000413852 ACYP2P14621 99 aa8.39□□□□□ -1.07
SEMA3F-202ENST00000413852 C7orf65Q6ZTY9 151 aa8.39□□□□□ -1.07
SEMA3F-202ENST00000413852 LINC00313P59037 77 aa8.37□□□□□ -1.07
SEMA3F-202ENST00000413852 IGKV2D-30A0A075B6S6 120 aa8.37□□□□□ -1.07
SEMA3F-202ENST00000413852 IGKV2-30P06310 120 aa8.37□□□□□ -1.07
SEMA3F-202ENST00000413852 KRTAP10-2P60368 255 aa8.35□□□□□ -1.07
SEMA3F-202ENST00000413852 KRTAP13-2Q52LG2 175 aa8.35□□□□□ -1.07
SEMA3F-202ENST00000413852 A0A1B0GU69 56 aa8.33□□□□□ -1.08
SEMA3F-202ENST00000413852 DMAC1Q96GE9 116 aa8.33□□□□□ -1.08
SEMA3F-202ENST00000413852 LY6G6CO95867 125 aa8.32□□□□□ -1.08
SEMA3F-202ENST00000413852 FAT2Q9NYQ8 4349 aa8.31□□□□□ -1.08
SEMA3F-202ENST00000413852 HYDINQ4G0P3 5121 aa8.31□□□□□ -1.08
SEMA3F-202ENST00000413852 SPINK1P00995 79 aa8.31□□□□□ -1.08
SEMA3F-202ENST00000413852 DNHD1Q96M86 4753 aa8.3□□□□□ -1.08
SEMA3F-202ENST00000413852 C1orf134Q5TEV5 83 aa8.3□□□□□ -1.08
SEMA3F-202ENST00000413852 VPS13BQ7Z7G8 4022 aa8.3□□□□□ -1.08
SEMA3F-202ENST00000413852 FAM229AH3BQW9 127 aa8.26□□□□□ -1.09
SEMA3F-202ENST00000413852 C8orf87E5RJ46 101 aa8.25□□□□□ -1.09
SEMA3F-202ENST00000413852 KRTAP16-1A8MUX0 517 aa8.24□□□□□ -1.09
SEMA3F-202ENST00000413852 SSBP3-AS1Q7Z2R9 100 aa8.24□□□□□ -1.09
SEMA3F-202ENST00000413852 Q8N1X5 172 aa8.24□□□□□ -1.09
SEMA3F-202ENST00000413852 PKD1P98161 4303 aa8.22□□□□□ -1.09
SEMA3F-202ENST00000413852 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.1
SEMA3F-202ENST00000413852 KRTAP10-1P60331 282 aa8.2□□□□□ -1.1
SEMA3F-202ENST00000413852 SPATA8Q6RVD6 105 aa8.16□□□□□ -1.1
SEMA3F-202ENST00000413852 KRTAP1-4P0C5Y4 121 aa8.14□□□□□ -1.11
SEMA3F-202ENST00000413852 PKHD1P08F94 4074 aa8.14□□□□□ -1.11
SEMA3F-202ENST00000413852 UQCR11O14957 56 aa8.14□□□□□ -1.11
SEMA3F-202ENST00000413852 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
SEMA3F-202ENST00000413852 CSAG1Q6PB30 78 aa8.08□□□□□ -1.12
SEMA3F-202ENST00000413852 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
SEMA3F-202ENST00000413852 C9orf92A6NGG3 77 aa8.07□□□□□ -1.12
SEMA3F-202ENST00000413852 TYMSOSQ8TAI1 123 aa8.07□□□□□ -1.12
SEMA3F-202ENST00000413852 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
SEMA3F-202ENST00000413852 FAT1Q14517 4588 aa8.03□□□□□ -1.12
SEMA3F-202ENST00000413852 LINC01554Q52M75 96 aa8.01□□□□□ -1.13
SEMA3F-202ENST00000413852 SMR3BP02814 79 aaPredicted RBP8□□□□□ -1.13
SEMA3F-202ENST00000413852 Q6ZSA8 131 aa7.99□□□□□ -1.13
SEMA3F-202ENST00000413852 H0YAA0 97 aa7.96□□□□□ -1.14
SEMA3F-202ENST00000413852 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
SEMA3F-202ENST00000413852 KRTAP3-1Q9BYR8 98 aa7.93□□□□□ -1.14
SEMA3F-202ENST00000413852 LINC00304Q8N9R0 145 aa7.9□□□□□ -1.14
SEMA3F-202ENST00000413852 DYNC1H1Q14204 4646 aaKnown RBP7.88□□□□□ -1.15
SEMA3F-202ENST00000413852 SACSQ9NZJ4 4579 aa7.86□□□□□ -1.15
SEMA3F-202ENST00000413852 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
SEMA3F-202ENST00000413852 A0A1B0GU33 70 aa7.82□□□□□ -1.16
SEMA3F-202ENST00000413852 A8MUU9 505 aa7.81□□□□□ -1.16
SEMA3F-202ENST00000413852 MYCBP2O75592 4640 aa7.76□□□□□ -1.17
SEMA3F-202ENST00000413852 H1FX-AS1Q4G0G2 97 aa7.76□□□□□ -1.17
SEMA3F-202ENST00000413852 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
SEMA3F-202ENST00000413852 H3BS24 57 aa7.73□□□□□ -1.17
SEMA3F-202ENST00000413852 PKHD1L1Q86WI1 4243 aa7.72□□□□□ -1.17
SEMA3F-202ENST00000413852 APOBP04114 4563 aaKnown RBP7.72□□□□□ -1.17
SEMA3F-202ENST00000413852 HSPG2P98160 4391 aa7.72□□□□□ -1.17
SEMA3F-202ENST00000413852 C20orf166-AS1Q96NR2 134 aa7.71□□□□□ -1.18
SEMA3F-202ENST00000413852 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
SEMA3F-202ENST00000413852 COX6B2Q6YFQ2 88 aa7.69□□□□□ -1.18
SEMA3F-202ENST00000413852 A0A0D9SG42 100 aa7.67□□□□□ -1.18
SEMA3F-202ENST00000413852 KRTAP13-4Q3LI77 160 aa7.61□□□□□ -1.19
SEMA3F-202ENST00000413852 FAT3Q8TDW7 4589 aa7.6□□□□□ -1.19
SEMA3F-202ENST00000413852 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.19
SEMA3F-202ENST00000413852 RPS29P62273 56 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 276 ms