RNA–Protein interactions for RNA: ENST00000413755.5

SNHG17-201, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-201ENST00000413755 TRBV20-1A0A075B6N2 111 aa7.23□□□□□ -1.25
SNHG17-201ENST00000413755 JMJD7-PLA2G4BH0Y9G9 81 aa7.23□□□□□ -1.25
SNHG17-201ENST00000413755 MT2AP02795 61 aa7.23□□□□□ -1.25
SNHG17-201ENST00000413755 DEFB116Q30KQ4 102 aa7.23□□□□□ -1.25
SNHG17-201ENST00000413755 C21orf62-AS1Q17RA5 79 aa7.22□□□□□ -1.25
SNHG17-201ENST00000413755 FCGBPQ9Y6R7 5405 aaPredicted RBP7.22□□□□□ -1.25
SNHG17-201ENST00000413755 KRTAP16-1A8MUX0 517 aa7.21□□□□□ -1.26
SNHG17-201ENST00000413755 LINC00313P59037 77 aa7.21□□□□□ -1.26
SNHG17-201ENST00000413755 LCE2BO14633 110 aa7.2□□□□□ -1.26
SNHG17-201ENST00000413755 LINC00472Q9H8W2 130 aa7.2□□□□□ -1.26
SNHG17-201ENST00000413755 IGHV6-1A0A0B4J1U7 121 aa7.18□□□□□ -1.26
SNHG17-201ENST00000413755 C9orf118A6NHY6 69 aa7.18□□□□□ -1.26
SNHG17-201ENST00000413755 MT1FP04733 61 aa7.18□□□□□ -1.26
SNHG17-201ENST00000413755 KRTAP19-1Q8IUB9 90 aa7.18□□□□□ -1.26
SNHG17-201ENST00000413755 PDE6GP18545 87 aa7.17□□□□□ -1.26
SNHG17-201ENST00000413755 A0A1W2PPM0 123 aa7.16□□□□□ -1.26
SNHG17-201ENST00000413755 TAX1BP3O14907 124 aa7.16□□□□□ -1.26
SNHG17-201ENST00000413755 Q6ZQT0 140 aa7.16□□□□□ -1.26
SNHG17-201ENST00000413755 KRTAP9-3Q9BYQ3 159 aa7.16□□□□□ -1.26
SNHG17-201ENST00000413755 C14orf132Q9NPU4 83 aa7.16□□□□□ -1.26
SNHG17-201ENST00000413755 LOC110117498A0A087WWA1 95 aa7.15□□□□□ -1.26
SNHG17-201ENST00000413755 J3KT08 172 aa7.14□□□□□ -1.27
SNHG17-201ENST00000413755 MPLKIPQ8TAP9 179 aa7.14□□□□□ -1.27
SNHG17-201ENST00000413755 A0A1B0GW54 56 aa7.13□□□□□ -1.27
SNHG17-201ENST00000413755 FAM236DA0A1B0GTK5 79 aa7.12□□□□□ -1.27
SNHG17-201ENST00000413755 A0A1B0GVX0 72 aa7.12□□□□□ -1.27
SNHG17-201ENST00000413755 C8orf87E5RJ46 101 aa7.12□□□□□ -1.27
SNHG17-201ENST00000413755 H3BT86 120 aa7.12□□□□□ -1.27
SNHG17-201ENST00000413755 FAM236CP0DP71 79 aa7.12□□□□□ -1.27
SNHG17-201ENST00000413755 HRES1P13985 223 aa7.12□□□□□ -1.27
SNHG17-201ENST00000413755 SYNE2Q8WXH0 6885 aaKnown RBP7.11□□□□□ -1.27
SNHG17-201ENST00000413755 NDUFB1O75438 58 aa7.11□□□□□ -1.27
SNHG17-201ENST00000413755 MTURNQ8N3F0 131 aa7.11□□□□□ -1.27
SNHG17-201ENST00000413755 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
SNHG17-201ENST00000413755 NOTCH2NLQ7Z3S9 236 aa7.1□□□□□ -1.27
SNHG17-201ENST00000413755 MACF1Q9UPN3 7388 aaKnown RBP7.09□□□□□ -1.27
SNHG17-201ENST00000413755 SPCS1Q9Y6A9 102 aa7.08□□□□□ -1.28
SNHG17-201ENST00000413755 NREPQ16612 68 aa7.07□□□□□ -1.28
SNHG17-201ENST00000413755 COL5A1-AS1Q5SY13 56 aa7.07□□□□□ -1.28
SNHG17-201ENST00000413755 RBM12B-AS1Q9P1G2 102 aa7.07□□□□□ -1.28
SNHG17-201ENST00000413755 A8MWP4 228 aa7.04□□□□□ -1.28
SNHG17-201ENST00000413755 C8orf17Q9NRJ1 99 aa7.01□□□□□ -1.29
SNHG17-201ENST00000413755 IGKV3D-7A0A0C4DH55 119 aa6.99□□□□□ -1.29
SNHG17-201ENST00000413755 PCP4L1A6NKN8 68 aa6.99□□□□□ -1.29
SNHG17-201ENST00000413755 KRTAP19-6Q3LI70 58 aa6.98□□□□□ -1.29
SNHG17-201ENST00000413755 K7EP34 96 aa6.97□□□□□ -1.29
SNHG17-201ENST00000413755 PRR15Q8IV56 129 aa6.97□□□□□ -1.29
SNHG17-201ENST00000413755 Q6ZVQ6 151 aa6.96□□□□□ -1.3
SNHG17-201ENST00000413755 ZCCHC13Q8WW36 166 aaKnown RBP6.96□□□□□ -1.3
SNHG17-201ENST00000413755 BPY2O14599 106 aa6.95□□□□□ -1.3
SNHG17-201ENST00000413755 SMCPP49901 116 aaPredicted RBP6.95□□□□□ -1.3
SNHG17-201ENST00000413755 GTF2H5Q6ZYL4 71 aa6.93□□□□□ -1.3
SNHG17-201ENST00000413755 Q8N9P0 234 aaPredicted RBP6.93□□□□□ -1.3
SNHG17-201ENST00000413755 K7EQZ3 153 aa6.92□□□□□ -1.3
SNHG17-201ENST00000413755 LINC00846Q9NV44 126 aa6.92□□□□□ -1.3
SNHG17-201ENST00000413755 MMP24-AS1A0A0U1RRL7 71 aa6.91□□□□□ -1.3
SNHG17-201ENST00000413755 SPINK7P58062 85 aa6.91□□□□□ -1.3
SNHG17-201ENST00000413755 TMEM254Q8TBM7 123 aa6.91□□□□□ -1.3
SNHG17-201ENST00000413755 MRPL34Q9BQ48 92 aaKnown RBP6.91□□□□□ -1.3
SNHG17-201ENST00000413755 PRO0461Q9UI25 63 aa6.91□□□□□ -1.3
SNHG17-201ENST00000413755 NDUFS5O43920 106 aa6.9□□□□□ -1.3
SNHG17-201ENST00000413755 hDV103S1A0JD37 113 aa6.89□□□□□ -1.31
SNHG17-201ENST00000413755 UBL5Q9BZL1 73 aa6.88□□□□□ -1.31
SNHG17-201ENST00000413755 Q8N9L7 120 aa6.85□□□□□ -1.31
SNHG17-201ENST00000413755 F8W1H4 67 aa6.84□□□□□ -1.31
SNHG17-201ENST00000413755 WFDC13Q8IUB5 93 aa6.84□□□□□ -1.31
SNHG17-201ENST00000413755 KRTAP6-3Q3LI67 103 aa6.82□□□□□ -1.32
SNHG17-201ENST00000413755 CASC2Q6XLA1 102 aa6.82□□□□□ -1.32
SNHG17-201ENST00000413755 ETDBQ3ZM63 59 aa6.8□□□□□ -1.32
SNHG17-201ENST00000413755 HCG22E2RYF7 251 aa6.77□□□□□ -1.33
SNHG17-201ENST00000413755 IGKV2D-30A0A075B6S6 120 aa6.75□□□□□ -1.33
SNHG17-201ENST00000413755 IGKV2-30P06310 120 aa6.75□□□□□ -1.33
SNHG17-201ENST00000413755 CXCL6P80162 114 aa6.73□□□□□ -1.33
SNHG17-201ENST00000413755 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
SNHG17-201ENST00000413755 Q5W150 140 aa6.7□□□□□ -1.34
SNHG17-201ENST00000413755 NEBP20929 6669 aa6.69□□□□□ -1.34
SNHG17-201ENST00000413755 H1FX-AS1Q4G0G2 97 aa6.68□□□□□ -1.34
SNHG17-201ENST00000413755 ACYP1P07311 99 aa6.66□□□□□ -1.34
SNHG17-201ENST00000413755 TP53AIP1Q9HCN2 124 aa6.63□□□□□ -1.35
SNHG17-201ENST00000413755 FAM240AA0A1B0GVK7 77 aa6.61□□□□□ -1.35
SNHG17-201ENST00000413755 C4orf26Q17RF5 130 aa6.59□□□□□ -1.35
SNHG17-201ENST00000413755 ATP5EP2Q5VTU8 51 aa6.59□□□□□ -1.35
SNHG17-201ENST00000413755 MUC12Q9UKN1 5478 aa6.56□□□□□ -1.36
SNHG17-201ENST00000413755 A0A1B0GV90 55 aa6.56□□□□□ -1.36
SNHG17-201ENST00000413755 HIST1H4AP62805 103 aaKnown RBP6.56□□□□□ -1.36
SNHG17-201ENST00000413755 A6NN06 94 aa6.52□□□□□ -1.37
SNHG17-201ENST00000413755 MT1BP07438 61 aa6.52□□□□□ -1.37
SNHG17-201ENST00000413755 TRAV22A0A0B4J277 110 aa6.49□□□□□ -1.37
SNHG17-201ENST00000413755 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
SNHG17-201ENST00000413755 C1orf64Q8NEQ6 169 aa6.49□□□□□ -1.37
SNHG17-201ENST00000413755 LOC101927531A0A1B0GV80 90 aa6.45□□□□□ -1.38
SNHG17-201ENST00000413755 J3QR89 54 aa6.45□□□□□ -1.38
SNHG17-201ENST00000413755 KRTAP19-8Q3LI54 63 aa6.45□□□□□ -1.38
SNHG17-201ENST00000413755 C5orf47Q569G3 176 aa6.45□□□□□ -1.38
SNHG17-201ENST00000413755 S4R3F8 94 aa6.45□□□□□ -1.38
SNHG17-201ENST00000413755 A0A087WVE0 104 aa6.44□□□□□ -1.38
SNHG17-201ENST00000413755 UQCRQO14949 82 aa6.44□□□□□ -1.38
SNHG17-201ENST00000413755 Q5VV11 94 aa6.44□□□□□ -1.38
SNHG17-201ENST00000413755 CYP4F30PQ9H0H9 118 aa6.44□□□□□ -1.38
SNHG17-201ENST00000413755 FAM236AA0A1B0GUQ0 79 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms