RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 NHP2Q9NX24 153 aaKnown RBP2.92□□□□□ -1.94
NOD1-203ENST00000413433 MRPL35Q9NZE8 188 aaKnown RBP2.92□□□□□ -1.94
NOD1-203ENST00000413433 HIGD1BQ9P298 99 aa2.92□□□□□ -1.94
NOD1-203ENST00000413433 CRYGAP11844 174 aa2.91□□□□□ -1.94
NOD1-203ENST00000413433 RETNLBQ9BQ08 111 aa2.91□□□□□ -1.94
NOD1-203ENST00000413433 V9GYV3 84 aa2.91□□□□□ -1.94
NOD1-203ENST00000413433 ACYP1P07311 99 aa2.9□□□□□ -1.95
NOD1-203ENST00000413433 CKS2P33552 79 aa2.9□□□□□ -1.95
NOD1-203ENST00000413433 TIMM21Q9BVV7 248 aa2.9□□□□□ -1.95
NOD1-203ENST00000413433 D6R8Y8 96 aa2.89□□□□□ -1.95
NOD1-203ENST00000413433 TRACP01848 142 aa2.89□□□□□ -1.95
NOD1-203ENST00000413433 P0C880 135 aa2.89□□□□□ -1.95
NOD1-203ENST00000413433 HBBP68871 147 aa2.89□□□□□ -1.95
NOD1-203ENST00000413433 C9orf153Q5TBE3 101 aa2.89□□□□□ -1.95
NOD1-203ENST00000413433 TEN1Q86WV5 123 aa2.89□□□□□ -1.95
NOD1-203ENST00000413433 C20orf78Q9BR46 151 aa2.89□□□□□ -1.95
NOD1-203ENST00000413433 TOMM7Q9P0U1 55 aa2.89□□□□□ -1.95
NOD1-203ENST00000413433 PRO2289Q9P1D8 64 aa2.89□□□□□ -1.95
NOD1-203ENST00000413433 C22orf24Q9Y442 160 aa2.89□□□□□ -1.95
NOD1-203ENST00000413433 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
NOD1-203ENST00000413433 LEPROTL1O95214 131 aa2.88□□□□□ -1.95
NOD1-203ENST00000413433 PPP1R17O96001 155 aa2.88□□□□□ -1.95
NOD1-203ENST00000413433 MRPS36P82909 103 aaKnown RBP2.88□□□□□ -1.95
NOD1-203ENST00000413433 ETDBQ3ZM63 59 aa2.88□□□□□ -1.95
NOD1-203ENST00000413433 PRELID3AQ96N28 172 aa2.88□□□□□ -1.95
NOD1-203ENST00000413433 SMIM2Q9BVW6 85 aa2.88□□□□□ -1.95
NOD1-203ENST00000413433 TRBV30A0A0K0K1B3 111 aa2.87□□□□□ -1.95
NOD1-203ENST00000413433 SMIM27A0A1W2PRY6 76 aa2.87□□□□□ -1.95
NOD1-203ENST00000413433 IFI27P40305 119 aaPredicted RBP2.87□□□□□ -1.95
NOD1-203ENST00000413433 LINC01545Q5VT33 79 aa2.87□□□□□ -1.95
NOD1-203ENST00000413433 SOSTDC1Q6X4U4 206 aa2.87□□□□□ -1.95
NOD1-203ENST00000413433 Q6ZQT0 140 aa2.87□□□□□ -1.95
NOD1-203ENST00000413433 PRR15Q8IV56 129 aa2.87□□□□□ -1.95
NOD1-203ENST00000413433 CCDC179H3BU77 68 aa2.86□□□□□ -1.95
NOD1-203ENST00000413433 ATOX1O00244 68 aa2.86□□□□□ -1.95
NOD1-203ENST00000413433 NUPR1O60356 82 aa2.86□□□□□ -1.95
NOD1-203ENST00000413433 MT-ATP8P03928 68 aa2.86□□□□□ -1.95
NOD1-203ENST00000413433 TMEM141Q96I45 108 aa2.86□□□□□ -1.95
NOD1-203ENST00000413433 TRBV7-7A0A0K0K1E9 115 aa2.85□□□□□ -1.95
NOD1-203ENST00000413433 BCE1O60756 84 aa2.85□□□□□ -1.95
NOD1-203ENST00000413433 IGKV4-1P06312 121 aa2.85□□□□□ -1.95
NOD1-203ENST00000413433 HRCT1Q6UXD1 115 aa2.85□□□□□ -1.95
NOD1-203ENST00000413433 CDKN2A-AS1Q9UH64 79 aa2.85□□□□□ -1.95
NOD1-203ENST00000413433 FAT4Q6V0I7 4981 aa2.85□□□□□ -1.95
NOD1-203ENST00000413433 A0A0G2JQZ4 141 aa2.84□□□□□ -1.95
NOD1-203ENST00000413433 TIMM17BO60830 172 aa2.84□□□□□ -1.95
NOD1-203ENST00000413433 COX7CP15954 63 aa2.84□□□□□ -1.95
NOD1-203ENST00000413433 TMEM170BQ5T4T1 132 aa2.84□□□□□ -1.95
NOD1-203ENST00000413433 F8VRH5 84 aa2.83□□□□□ -1.96
NOD1-203ENST00000413433 ATP5EP56381 51 aaPredicted RBP2.83□□□□□ -1.96
NOD1-203ENST00000413433 PRLHP81277 87 aa2.83□□□□□ -1.96
NOD1-203ENST00000413433 Q8IZM0 81 aa2.83□□□□□ -1.96
NOD1-203ENST00000413433 AMELXQ99217 191 aa2.83□□□□□ -1.96
NOD1-203ENST00000413433 IGKV2D-26A0A0A0MRZ7 120 aa2.82□□□□□ -1.96
NOD1-203ENST00000413433 MYMXA0A1B0GTQ4 84 aa2.82□□□□□ -1.96
NOD1-203ENST00000413433 IGIPA6NJ69 53 aa2.82□□□□□ -1.96
NOD1-203ENST00000413433 NPC2P61916 151 aa2.82□□□□□ -1.96
NOD1-203ENST00000413433 Q8N8P6 123 aa2.82□□□□□ -1.96
NOD1-203ENST00000413433 IFI27L1Q96BM0 104 aa2.82□□□□□ -1.96
NOD1-203ENST00000413433 LINC01549A6NIU2 74 aa2.81□□□□□ -1.96
NOD1-203ENST00000413433 IGKCP01834 107 aa2.81□□□□□ -1.96
NOD1-203ENST00000413433 BAALC-AS2P0C853 105 aa2.81□□□□□ -1.96
NOD1-203ENST00000413433 TPRXLQ17RH7 258 aa2.81□□□□□ -1.96
NOD1-203ENST00000413433 LINC00643Q86TS7 51 aa2.81□□□□□ -1.96
NOD1-203ENST00000413433 KRTAP13-1Q8IUC0 172 aa2.81□□□□□ -1.96
NOD1-203ENST00000413433 FAM19A2Q8N3H0 131 aa2.81□□□□□ -1.96
NOD1-203ENST00000413433 COX7B2Q8TF08 81 aa2.81□□□□□ -1.96
NOD1-203ENST00000413433 SERP1Q9Y6X1 66 aa2.81□□□□□ -1.96
NOD1-203ENST00000413433 MUC17Q685J3 4493 aa2.81□□□□□ -1.96
NOD1-203ENST00000413433 K7ERJ3 54 aa2.8□□□□□ -1.96
NOD1-203ENST00000413433 NDUFC1O43677 76 aa2.8□□□□□ -1.96
NOD1-203ENST00000413433 COX6CP09669 75 aa2.8□□□□□ -1.96
NOD1-203ENST00000413433 C7orf65Q6ZTY9 151 aa2.8□□□□□ -1.96
NOD1-203ENST00000413433 KRTAP4-1Q9BYQ7 146 aa2.8□□□□□ -1.96
NOD1-203ENST00000413433 ATXN8Q156A1 80 aa2.79□□□□□ -1.96
NOD1-203ENST00000413433 SERP2Q8N6R1 65 aa2.79□□□□□ -1.96
NOD1-203ENST00000413433 ZNF625Q96I27 306 aaPredicted RBP2.79□□□□□ -1.96
NOD1-203ENST00000413433 NXT2Q9NPJ8 142 aaKnown RBP2.79□□□□□ -1.96
NOD1-203ENST00000413433 LOC107984156A0A0G2JMH3 177 aa2.78□□□□□ -1.96
NOD1-203ENST00000413433 HBDP02042 147 aa2.78□□□□□ -1.96
NOD1-203ENST00000413433 PLNP26678 52 aa2.78□□□□□ -1.96
NOD1-203ENST00000413433 ARL17AQ8IVW1 177 aa2.78□□□□□ -1.96
NOD1-203ENST00000413433 NAA38Q9BRA0 125 aaKnown RBP2.78□□□□□ -1.96
NOD1-203ENST00000413433 TRBV7-6A0A0J9YX20 115 aa2.77□□□□□ -1.97
NOD1-203ENST00000413433 S100A7L2Q5SY68 101 aa2.77□□□□□ -1.97
NOD1-203ENST00000413433 Q5XG85 94 aa2.77□□□□□ -1.97
NOD1-203ENST00000413433 C14orf132Q9NPU4 83 aa2.77□□□□□ -1.97
NOD1-203ENST00000413433 CRCT1Q9UGL9 99 aa2.77□□□□□ -1.97
NOD1-203ENST00000413433 FAM236AA0A1B0GUQ0 79 aa2.76□□□□□ -1.97
NOD1-203ENST00000413433 FAM236BA0A1B0GV22 79 aa2.76□□□□□ -1.97
NOD1-203ENST00000413433 K7EMI3 77 aa2.76□□□□□ -1.97
NOD1-203ENST00000413433 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
NOD1-203ENST00000413433 LINC00158P58513 81 aa2.75□□□□□ -1.97
NOD1-203ENST00000413433 ASB16-AS1Q495Z4 193 aa2.75□□□□□ -1.97
NOD1-203ENST00000413433 SPRR4Q96PI1 79 aa2.75□□□□□ -1.97
NOD1-203ENST00000413433 PRO1854Q9UHT4 67 aa2.75□□□□□ -1.97
NOD1-203ENST00000413433 hADV29S1A0JD25 119 aa2.74□□□□□ -1.97
NOD1-203ENST00000413433 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
NOD1-203ENST00000413433 SPAG11AQ6PDA7 123 aa2.74□□□□□ -1.97
NOD1-203ENST00000413433 BRK1Q8WUW1 75 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms