RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 MPLKIPQ8TAP9 179 aa6.38□□□□□ -1.39
PTPRN-203ENST00000412847 FAM218AQ96MZ4 157 aa6.38□□□□□ -1.39
PTPRN-203ENST00000412847 NAA38Q9BRA0 125 aaKnown RBP6.38□□□□□ -1.39
PTPRN-203ENST00000412847 KRTAP16-1A8MUX0 517 aa6.37□□□□□ -1.39
PTPRN-203ENST00000412847 HRES1P13985 223 aa6.37□□□□□ -1.39
PTPRN-203ENST00000412847 KRTAP6-3Q3LI67 103 aa6.35□□□□□ -1.39
PTPRN-203ENST00000412847 ORMDL1Q9P0S3 153 aa6.35□□□□□ -1.39
PTPRN-203ENST00000412847 A0A087WSZ3 146 aa6.33□□□□□ -1.4
PTPRN-203ENST00000412847 TEN1Q86WV5 123 aa6.33□□□□□ -1.4
PTPRN-203ENST00000412847 SIGMAR1Q99720 223 aa6.33□□□□□ -1.4
PTPRN-203ENST00000412847 SPCS1Q9Y6A9 102 aa6.33□□□□□ -1.4
PTPRN-203ENST00000412847 TMEM256-PLSCR3K7ERE1 68 aa6.32□□□□□ -1.4
PTPRN-203ENST00000412847 GTF2H5Q6ZYL4 71 aa6.31□□□□□ -1.4
PTPRN-203ENST00000412847 LINC00313P59037 77 aa6.3□□□□□ -1.4
PTPRN-203ENST00000412847 K7EP34 96 aa6.29□□□□□ -1.4
PTPRN-203ENST00000412847 UBE2V1Q13404 147 aa6.29□□□□□ -1.4
PTPRN-203ENST00000412847 NOTCH2NLQ7Z3S9 236 aa6.29□□□□□ -1.4
PTPRN-203ENST00000412847 C9JAW5 83 aa6.28□□□□□ -1.4
PTPRN-203ENST00000412847 H3BMG7 143 aa6.28□□□□□ -1.4
PTPRN-203ENST00000412847 BAALC-AS2P0C853 105 aa6.28□□□□□ -1.4
PTPRN-203ENST00000412847 MTURNQ8N3F0 131 aa6.28□□□□□ -1.4
PTPRN-203ENST00000412847 H3BT86 120 aa6.27□□□□□ -1.41
PTPRN-203ENST00000412847 NDUFV3P56181 108 aaKnown RBP6.27□□□□□ -1.41
PTPRN-203ENST00000412847 ANKRD29Q8N6D5 301 aa6.25□□□□□ -1.41
PTPRN-203ENST00000412847 JMJD7-PLA2G4BH0Y9G9 81 aa6.24□□□□□ -1.41
PTPRN-203ENST00000412847 IGKV4-1P06312 121 aa6.24□□□□□ -1.41
PTPRN-203ENST00000412847 NEBP20929 6669 aa6.23□□□□□ -1.41
PTPRN-203ENST00000412847 A8MWP4 228 aa6.22□□□□□ -1.41
PTPRN-203ENST00000412847 A0A1W2PNM2 257 aa6.21□□□□□ -1.42
PTPRN-203ENST00000412847 F8W1H4 67 aa6.21□□□□□ -1.42
PTPRN-203ENST00000412847 RBM3P98179 157 aaKnown RBP6.21□□□□□ -1.42
PTPRN-203ENST00000412847 C21orf62-AS1Q17RA5 79 aa6.21□□□□□ -1.42
PTPRN-203ENST00000412847 Q8N9P0 234 aaPredicted RBP6.2□□□□□ -1.42
PTPRN-203ENST00000412847 DSCR8Q96T75 97 aa6.2□□□□□ -1.42
PTPRN-203ENST00000412847 PDE6GP18545 87 aa6.19□□□□□ -1.42
PTPRN-203ENST00000412847 IGHV6-1A0A0B4J1U7 121 aa6.18□□□□□ -1.42
PTPRN-203ENST00000412847 A0A1B0GV90 55 aa6.18□□□□□ -1.42
PTPRN-203ENST00000412847 PRO0461Q9UI25 63 aa6.17□□□□□ -1.42
PTPRN-203ENST00000412847 TRBV7-4A0A0J9YYF1 115 aa6.16□□□□□ -1.42
PTPRN-203ENST00000412847 A0A1B0GV72 72 aa6.16□□□□□ -1.42
PTPRN-203ENST00000412847 SMCPP49901 116 aaPredicted RBP6.16□□□□□ -1.42
PTPRN-203ENST00000412847 DEFB116Q30KQ4 102 aa6.16□□□□□ -1.42
PTPRN-203ENST00000412847 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
PTPRN-203ENST00000412847 SPINK7P58062 85 aa6.15□□□□□ -1.42
PTPRN-203ENST00000412847 CCKP06307 115 aa6.14□□□□□ -1.43
PTPRN-203ENST00000412847 ZCCHC13Q8WW36 166 aaKnown RBP6.14□□□□□ -1.43
PTPRN-203ENST00000412847 A0A1B0GW54 56 aa6.13□□□□□ -1.43
PTPRN-203ENST00000412847 C8orf87E5RJ46 101 aa6.13□□□□□ -1.43
PTPRN-203ENST00000412847 LINC00472Q9H8W2 130 aa6.13□□□□□ -1.43
PTPRN-203ENST00000412847 C14orf132Q9NPU4 83 aa6.12□□□□□ -1.43
PTPRN-203ENST00000412847 Q6ZQT0 140 aa6.11□□□□□ -1.43
PTPRN-203ENST00000412847 WFDC13Q8IUB5 93 aa6.11□□□□□ -1.43
PTPRN-203ENST00000412847 VPS25Q9BRG1 176 aa6.11□□□□□ -1.43
PTPRN-203ENST00000412847 A0A1B0GVX0 72 aa6.1□□□□□ -1.43
PTPRN-203ENST00000412847 ETDBQ3ZM63 59 aa6.1□□□□□ -1.43
PTPRN-203ENST00000412847 KRTAP20-1Q3LI63 56 aa6.08□□□□□ -1.44
PTPRN-203ENST00000412847 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
PTPRN-203ENST00000412847 J3QR89 54 aa6□□□□□ -1.45
PTPRN-203ENST00000412847 ACYP1P07311 99 aa6□□□□□ -1.45
PTPRN-203ENST00000412847 A6NN06 94 aa5.99□□□□□ -1.45
PTPRN-203ENST00000412847 J3KT08 172 aa5.99□□□□□ -1.45
PTPRN-203ENST00000412847 NREPQ16612 68 aa5.99□□□□□ -1.45
PTPRN-203ENST00000412847 FAM240AA0A1B0GVK7 77 aa5.98□□□□□ -1.45
PTPRN-203ENST00000412847 H1FX-AS1Q4G0G2 97 aa5.98□□□□□ -1.45
PTPRN-203ENST00000412847 UBL5Q9BZL1 73 aa5.98□□□□□ -1.45
PTPRN-203ENST00000412847 NDUFB1O75438 58 aa5.94□□□□□ -1.46
PTPRN-203ENST00000412847 Q6ZVQ6 151 aa5.94□□□□□ -1.46
PTPRN-203ENST00000412847 C8orf17Q9NRJ1 99 aa5.93□□□□□ -1.46
PTPRN-203ENST00000412847 IGKV3D-7A0A0C4DH55 119 aa5.92□□□□□ -1.46
PTPRN-203ENST00000412847 K7ERU9 68 aa5.91□□□□□ -1.46
PTPRN-203ENST00000412847 BPY2O14599 106 aa5.91□□□□□ -1.46
PTPRN-203ENST00000412847 KRTAP5-9P26371 169 aa5.9□□□□□ -1.46
PTPRN-203ENST00000412847 MT1BP07438 61 aa5.89□□□□□ -1.47
PTPRN-203ENST00000412847 Q5VV11 94 aa5.88□□□□□ -1.47
PTPRN-203ENST00000412847 CXCL6P80162 114 aa5.87□□□□□ -1.47
PTPRN-203ENST00000412847 ATP5EP2Q5VTU8 51 aa5.87□□□□□ -1.47
PTPRN-203ENST00000412847 LINC00643Q86TS7 51 aa5.85□□□□□ -1.47
PTPRN-203ENST00000412847 PRR15Q8IV56 129 aa5.85□□□□□ -1.47
PTPRN-203ENST00000412847 GPR98Q8WXG9 6306 aa5.85□□□□□ -1.47
PTPRN-203ENST00000412847 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
PTPRN-203ENST00000412847 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
PTPRN-203ENST00000412847 KRTAP10-5P60370 271 aa5.84□□□□□ -1.47
PTPRN-203ENST00000412847 K7EQZ3 153 aa5.82□□□□□ -1.48
PTPRN-203ENST00000412847 KRTAP19-8Q3LI54 63 aa5.82□□□□□ -1.48
PTPRN-203ENST00000412847 TMEM254Q8TBM7 123 aa5.81□□□□□ -1.48
PTPRN-203ENST00000412847 MRPL34Q9BQ48 92 aaKnown RBP5.81□□□□□ -1.48
PTPRN-203ENST00000412847 IGKV2D-30A0A075B6S6 120 aa5.8□□□□□ -1.48
PTPRN-203ENST00000412847 IGKV2-30P06310 120 aa5.8□□□□□ -1.48
PTPRN-203ENST00000412847 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
PTPRN-203ENST00000412847 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
PTPRN-203ENST00000412847 KMT2DO14686 5537 aa5.8□□□□□ -1.48
PTPRN-203ENST00000412847 MDN1Q9NU22 5596 aa5.79□□□□□ -1.48
PTPRN-203ENST00000412847 MMP24-AS1A0A0U1RRL7 71 aa5.79□□□□□ -1.48
PTPRN-203ENST00000412847 C7orf65Q6ZTY9 151 aa5.79□□□□□ -1.48
PTPRN-203ENST00000412847 SPRR2GQ9BYE4 73 aa5.79□□□□□ -1.48
PTPRN-203ENST00000412847 NDUFS5O43920 106 aa5.78□□□□□ -1.48
PTPRN-203ENST00000412847 C5orf47Q569G3 176 aa5.78□□□□□ -1.48
PTPRN-203ENST00000412847 Q8N9L7 120 aa5.78□□□□□ -1.48
PTPRN-203ENST00000412847 hDV103S1A0JD37 113 aa5.76□□□□□ -1.49
PTPRN-203ENST00000412847 HCG22E2RYF7 251 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms