RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 PCOTHQ58A44 107 aa7.47□□□□□ -1.21
GYPC-203ENST00000409836 C14orf132Q9NPU4 83 aa7.47□□□□□ -1.21
GYPC-203ENST00000409836 IGKV4-1P06312 121 aa7.46□□□□□ -1.22
GYPC-203ENST00000409836 FAT4Q6V0I7 4981 aa7.46□□□□□ -1.22
GYPC-203ENST00000409836 A8MUU9 505 aa7.45□□□□□ -1.22
GYPC-203ENST00000409836 J3KT08 172 aa7.44□□□□□ -1.22
GYPC-203ENST00000409836 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
GYPC-203ENST00000409836 KRTAP16-1A8MUX0 517 aa7.43□□□□□ -1.22
GYPC-203ENST00000409836 PRO0461Q9UI25 63 aa7.43□□□□□ -1.22
GYPC-203ENST00000409836 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
GYPC-203ENST00000409836 A0A1B0GVX0 72 aa7.4□□□□□ -1.22
GYPC-203ENST00000409836 KRTAP19-2Q3LHN2 52 aa7.4□□□□□ -1.22
GYPC-203ENST00000409836 C8orf87E5RJ46 101 aa7.39□□□□□ -1.23
GYPC-203ENST00000409836 DSCR10P59022 87 aa7.38□□□□□ -1.23
GYPC-203ENST00000409836 LINC00313P59037 77 aa7.38□□□□□ -1.23
GYPC-203ENST00000409836 DEFB116Q30KQ4 102 aa7.38□□□□□ -1.23
GYPC-203ENST00000409836 ANAPC13Q9BS18 74 aa7.38□□□□□ -1.23
GYPC-203ENST00000409836 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
GYPC-203ENST00000409836 A8MWP4 228 aa7.35□□□□□ -1.23
GYPC-203ENST00000409836 LCE2CQ5TA81 110 aa7.35□□□□□ -1.23
GYPC-203ENST00000409836 ATP11AUNQ6ZP68 121 aa7.35□□□□□ -1.23
GYPC-203ENST00000409836 IGHV6-1A0A0B4J1U7 121 aa7.34□□□□□ -1.23
GYPC-203ENST00000409836 ETDBQ3ZM63 59 aa7.32□□□□□ -1.24
GYPC-203ENST00000409836 NDUFB1O75438 58 aa7.31□□□□□ -1.24
GYPC-203ENST00000409836 NREPQ16612 68 aa7.31□□□□□ -1.24
GYPC-203ENST00000409836 IGKV3D-7A0A0C4DH55 119 aa7.3□□□□□ -1.24
GYPC-203ENST00000409836 PRR15Q8IV56 129 aa7.29□□□□□ -1.24
GYPC-203ENST00000409836 Q8N9P0 234 aaPredicted RBP7.28□□□□□ -1.24
GYPC-203ENST00000409836 C5orf47Q569G3 176 aa7.27□□□□□ -1.25
GYPC-203ENST00000409836 C8orf17Q9NRJ1 99 aa7.27□□□□□ -1.25
GYPC-203ENST00000409836 Q6ZVQ6 151 aa7.26□□□□□ -1.25
GYPC-203ENST00000409836 IMUPQ9GZP8 106 aa7.25□□□□□ -1.25
GYPC-203ENST00000409836 MMP24-AS1A0A0U1RRL7 71 aa7.23□□□□□ -1.25
GYPC-203ENST00000409836 RPS28P62857 69 aaKnown RBP7.23□□□□□ -1.25
GYPC-203ENST00000409836 K7EQZ3 153 aa7.22□□□□□ -1.25
GYPC-203ENST00000409836 MT-ATP8P03928 68 aa7.22□□□□□ -1.25
GYPC-203ENST00000409836 MT1HP80294 61 aa7.22□□□□□ -1.25
GYPC-203ENST00000409836 LINC00846Q9NV44 126 aa7.22□□□□□ -1.25
GYPC-203ENST00000409836 FAM240AA0A1B0GVK7 77 aa7.21□□□□□ -1.26
GYPC-203ENST00000409836 BPY2O14599 106 aa7.21□□□□□ -1.26
GYPC-203ENST00000409836 FLGP20930 4061 aaPredicted RBP7.21□□□□□ -1.26
GYPC-203ENST00000409836 ACYP1P07311 99 aa7.2□□□□□ -1.26
GYPC-203ENST00000409836 SMIM20Q8N5G0 67 aa7.2□□□□□ -1.26
GYPC-203ENST00000409836 TMEM254Q8TBM7 123 aa7.2□□□□□ -1.26
GYPC-203ENST00000409836 ZCCHC13Q8WW36 166 aaKnown RBP7.2□□□□□ -1.26
GYPC-203ENST00000409836 UBL5Q9BZL1 73 aa7.19□□□□□ -1.26
GYPC-203ENST00000409836 MPLKIPQ8TAP9 179 aa7.17□□□□□ -1.26
GYPC-203ENST00000409836 MRPL34Q9BQ48 92 aaKnown RBP7.16□□□□□ -1.26
GYPC-203ENST00000409836 hDV103S1A0JD37 113 aa7.15□□□□□ -1.26
GYPC-203ENST00000409836 HRES1P13985 223 aa7.13□□□□□ -1.27
GYPC-203ENST00000409836 COX6B2Q6YFQ2 88 aa7.13□□□□□ -1.27
GYPC-203ENST00000409836 UQCRQO14949 82 aa7.12□□□□□ -1.27
GYPC-203ENST00000409836 CXCL6P80162 114 aa7.11□□□□□ -1.27
GYPC-203ENST00000409836 Q8N9L7 120 aa7.11□□□□□ -1.27
GYPC-203ENST00000409836 CCDC179H3BU77 68 aa7.08□□□□□ -1.28
GYPC-203ENST00000409836 CASC2Q6XLA1 102 aa7.07□□□□□ -1.28
GYPC-203ENST00000409836 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
GYPC-203ENST00000409836 SPINK7P58062 85 aa7.06□□□□□ -1.28
GYPC-203ENST00000409836 HCG22E2RYF7 251 aa7.05□□□□□ -1.28
GYPC-203ENST00000409836 LINC00643Q86TS7 51 aa7.05□□□□□ -1.28
GYPC-203ENST00000409836 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
GYPC-203ENST00000409836 WFDC13Q8IUB5 93 aa7.03□□□□□ -1.28
GYPC-203ENST00000409836 RBM12B-AS1Q9P1G2 102 aa7.03□□□□□ -1.28
GYPC-203ENST00000409836 ATOX1O00244 68 aa7.02□□□□□ -1.29
GYPC-203ENST00000409836 TMEM258P61165 79 aa7.02□□□□□ -1.29
GYPC-203ENST00000409836 ATP5EP2Q5VTU8 51 aa7.02□□□□□ -1.29
GYPC-203ENST00000409836 NDUFS5O43920 106 aa7□□□□□ -1.29
GYPC-203ENST00000409836 COX7CP15954 63 aa7□□□□□ -1.29
GYPC-203ENST00000409836 Q5W150 140 aa6.98□□□□□ -1.29
GYPC-203ENST00000409836 KRTAP9-2Q9BYQ4 174 aa6.98□□□□□ -1.29
GYPC-203ENST00000409836 M0R2T5 61 aa6.97□□□□□ -1.29
GYPC-203ENST00000409836 LCE2DQ5TA82 110 aaPredicted RBP6.96□□□□□ -1.3
GYPC-203ENST00000409836 FAM236DA0A1B0GTK5 79 aa6.95□□□□□ -1.3
GYPC-203ENST00000409836 FAM236CP0DP71 79 aa6.95□□□□□ -1.3
GYPC-203ENST00000409836 C7orf65Q6ZTY9 151 aa6.95□□□□□ -1.3
GYPC-203ENST00000409836 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
GYPC-203ENST00000409836 FAM236AA0A1B0GUQ0 79 aa6.92□□□□□ -1.3
GYPC-203ENST00000409836 FAM236BA0A1B0GV22 79 aa6.92□□□□□ -1.3
GYPC-203ENST00000409836 HIST1H4AP62805 103 aaKnown RBP6.9□□□□□ -1.3
GYPC-203ENST00000409836 SERP2Q8N6R1 65 aa6.89□□□□□ -1.31
GYPC-203ENST00000409836 IGKV2D-30A0A075B6S6 120 aa6.87□□□□□ -1.31
GYPC-203ENST00000409836 IGKV2-30P06310 120 aa6.87□□□□□ -1.31
GYPC-203ENST00000409836 KRTAP9-8Q9BYQ0 159 aa6.87□□□□□ -1.31
GYPC-203ENST00000409836 PRO0628Q9UI54 55 aa6.87□□□□□ -1.31
GYPC-203ENST00000409836 TRAV22A0A0B4J277 110 aa6.81□□□□□ -1.32
GYPC-203ENST00000409836 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
GYPC-203ENST00000409836 H1FX-AS1Q4G0G2 97 aa6.81□□□□□ -1.32
GYPC-203ENST00000409836 SERP1Q9Y6X1 66 aa6.8□□□□□ -1.32
GYPC-203ENST00000409836 NDUFC1O43677 76 aa6.78□□□□□ -1.32
GYPC-203ENST00000409836 MT2AP02795 61 aa6.78□□□□□ -1.32
GYPC-203ENST00000409836 A0A087WVE0 104 aa6.77□□□□□ -1.33
GYPC-203ENST00000409836 SMIM26A0A096LP01 95 aa6.76□□□□□ -1.33
GYPC-203ENST00000409836 LOC101927531A0A1B0GV80 90 aa6.75□□□□□ -1.33
GYPC-203ENST00000409836 C4orf26Q17RF5 130 aa6.75□□□□□ -1.33
GYPC-203ENST00000409836 CYP4F30PQ9H0H9 118 aa6.74□□□□□ -1.33
GYPC-203ENST00000409836 KRTAP3-1Q9BYR8 98 aa6.73□□□□□ -1.33
GYPC-203ENST00000409836 MT1FP04733 61 aa6.72□□□□□ -1.33
GYPC-203ENST00000409836 OCR1Q9BZK8 76 aa6.72□□□□□ -1.33
GYPC-203ENST00000409836 V9GYY9 64 aa6.7□□□□□ -1.34
GYPC-203ENST00000409836 TRAV7A0A075B6U4 112 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms