RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 C20orf197Q8N268 126 aa7.49□□□□□ -1.21
CHRNA1-205ENST00000409542 Q8N9L7 120 aa7.49□□□□□ -1.21
CHRNA1-205ENST00000409542 UBE2AP49459 152 aa7.48□□□□□ -1.21
CHRNA1-205ENST00000409542 KLKP1Q107X0 134 aa7.48□□□□□ -1.21
CHRNA1-205ENST00000409542 RPS28P62857 69 aaKnown RBP7.47□□□□□ -1.21
CHRNA1-205ENST00000409542 KRTAP13-1Q8IUC0 172 aa7.46□□□□□ -1.22
CHRNA1-205ENST00000409542 J3KT08 172 aa7.45□□□□□ -1.22
CHRNA1-205ENST00000409542 MUC17Q685J3 4493 aa7.45□□□□□ -1.22
CHRNA1-205ENST00000409542 OCR1Q9BZK8 76 aa7.44□□□□□ -1.22
CHRNA1-205ENST00000409542 DSCR10P59022 87 aa7.43□□□□□ -1.22
CHRNA1-205ENST00000409542 NDUFC1O43677 76 aa7.43□□□□□ -1.22
CHRNA1-205ENST00000409542 H7BZZ5 65 aa7.41□□□□□ -1.22
CHRNA1-205ENST00000409542 A0A087X002 238 aa7.4□□□□□ -1.22
CHRNA1-205ENST00000409542 A0A087WSZ3 146 aa7.39□□□□□ -1.23
CHRNA1-205ENST00000409542 A0A0G2JQZ4 141 aa7.39□□□□□ -1.23
CHRNA1-205ENST00000409542 FAM236DA0A1B0GTK5 79 aa7.39□□□□□ -1.23
CHRNA1-205ENST00000409542 ZNF861PO60384 105 aa7.39□□□□□ -1.23
CHRNA1-205ENST00000409542 FAM236CP0DP71 79 aa7.39□□□□□ -1.23
CHRNA1-205ENST00000409542 K7EQZ3 153 aa7.38□□□□□ -1.23
CHRNA1-205ENST00000409542 TMEM254Q8TBM7 123 aa7.38□□□□□ -1.23
CHRNA1-205ENST00000409542 SNURFQ9Y675 71 aa7.38□□□□□ -1.23
CHRNA1-205ENST00000409542 LINC00483Q53H64 154 aa7.36□□□□□ -1.23
CHRNA1-205ENST00000409542 RETNLBQ9BQ08 111 aa7.36□□□□□ -1.23
CHRNA1-205ENST00000409542 HCG22E2RYF7 251 aa7.36□□□□□ -1.23
CHRNA1-205ENST00000409542 ANAPC11Q9NYG5 84 aa7.36□□□□□ -1.23
CHRNA1-205ENST00000409542 ATP5EP56381 51 aaPredicted RBP7.35□□□□□ -1.23
CHRNA1-205ENST00000409542 ZNF706Q9Y5V0 76 aaPredicted RBP7.35□□□□□ -1.23
CHRNA1-205ENST00000409542 TYMSOSQ8TAI1 123 aa7.34□□□□□ -1.23
CHRNA1-205ENST00000409542 KRTAP13-2Q52LG2 175 aa7.32□□□□□ -1.24
CHRNA1-205ENST00000409542 LINC00472Q9H8W2 130 aa7.32□□□□□ -1.24
CHRNA1-205ENST00000409542 SERP1Q9Y6X1 66 aa7.32□□□□□ -1.24
CHRNA1-205ENST00000409542 A8MWP4 228 aa7.3□□□□□ -1.24
CHRNA1-205ENST00000409542 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
CHRNA1-205ENST00000409542 PRR15Q8IV56 129 aa7.3□□□□□ -1.24
CHRNA1-205ENST00000409542 TPRXLQ17RH7 258 aa7.28□□□□□ -1.24
CHRNA1-205ENST00000409542 C5orf47Q569G3 176 aa7.28□□□□□ -1.24
CHRNA1-205ENST00000409542 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
CHRNA1-205ENST00000409542 IGLV7-46A0A075B6I9 117 aa7.26□□□□□ -1.25
CHRNA1-205ENST00000409542 ZCCHC13Q8WW36 166 aaKnown RBP7.26□□□□□ -1.25
CHRNA1-205ENST00000409542 IGLV9-49A0A0B4J1Y8 123 aa7.25□□□□□ -1.25
CHRNA1-205ENST00000409542 WFDC13Q8IUB5 93 aa7.24□□□□□ -1.25
CHRNA1-205ENST00000409542 LINC00304Q8N9R0 145 aa7.24□□□□□ -1.25
CHRNA1-205ENST00000409542 CASC2Q6XLA1 102 aa7.24□□□□□ -1.25
CHRNA1-205ENST00000409542 Q96NJ1 140 aa7.22□□□□□ -1.25
CHRNA1-205ENST00000409542 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
CHRNA1-205ENST00000409542 NDUFB1O75438 58 aa7.21□□□□□ -1.26
CHRNA1-205ENST00000409542 MOBPQ13875 183 aa7.21□□□□□ -1.26
CHRNA1-205ENST00000409542 CRCT1Q9UGL9 99 aa7.21□□□□□ -1.26
CHRNA1-205ENST00000409542 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
CHRNA1-205ENST00000409542 MMP24-AS1A0A0U1RRL7 71 aa7.2□□□□□ -1.26
CHRNA1-205ENST00000409542 H3BPC8 53 aa7.19□□□□□ -1.26
CHRNA1-205ENST00000409542 MP68P56378 58 aa7.19□□□□□ -1.26
CHRNA1-205ENST00000409542 FAM229BQ4G0N7 80 aa7.19□□□□□ -1.26
CHRNA1-205ENST00000409542 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
CHRNA1-205ENST00000409542 Q5XG85 94 aa7.17□□□□□ -1.26
CHRNA1-205ENST00000409542 SVIPQ8NHG7 77 aa7.17□□□□□ -1.26
CHRNA1-205ENST00000409542 ASB16-AS1Q495Z4 193 aa7.17□□□□□ -1.26
CHRNA1-205ENST00000409542 hDV103S1A0JD37 113 aa7.15□□□□□ -1.27
CHRNA1-205ENST00000409542 CD164Q04900 197 aa7.15□□□□□ -1.27
CHRNA1-205ENST00000409542 HRCT1Q6UXD1 115 aa7.15□□□□□ -1.27
CHRNA1-205ENST00000409542 H0Y9P7 68 aa7.14□□□□□ -1.27
CHRNA1-205ENST00000409542 C8orf17Q9NRJ1 99 aa7.14□□□□□ -1.27
CHRNA1-205ENST00000409542 TRAV22A0A0B4J277 110 aa7.13□□□□□ -1.27
CHRNA1-205ENST00000409542 A0A1B0GVX0 72 aa7.13□□□□□ -1.27
CHRNA1-205ENST00000409542 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
CHRNA1-205ENST00000409542 SSBP3-AS1Q7Z2R9 100 aa7.12□□□□□ -1.27
CHRNA1-205ENST00000409542 CYP4F30PQ9H0H9 118 aa7.11□□□□□ -1.27
CHRNA1-205ENST00000409542 TP53AIP1Q9HCN2 124 aa7.11□□□□□ -1.27
CHRNA1-205ENST00000409542 LINC00208Q96KT6 92 aa7.11□□□□□ -1.27
CHRNA1-205ENST00000409542 C4orf26Q17RF5 130 aa7.09□□□□□ -1.27
CHRNA1-205ENST00000409542 FP248Q71RG6 208 aaPredicted RBP7.09□□□□□ -1.27
CHRNA1-205ENST00000409542 SPANXA2-OT1Q8N9U9 137 aa7.08□□□□□ -1.28
CHRNA1-205ENST00000409542 IGHV6-1A0A0B4J1U7 121 aa7.07□□□□□ -1.28
CHRNA1-205ENST00000409542 SPAG11AQ6PDA7 123 aa7.06□□□□□ -1.28
CHRNA1-205ENST00000409542 C1orf64Q8NEQ6 169 aa7.06□□□□□ -1.28
CHRNA1-205ENST00000409542 MRPL34Q9BQ48 92 aaKnown RBP7.05□□□□□ -1.28
CHRNA1-205ENST00000409542 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
CHRNA1-205ENST00000409542 C8orf87E5RJ46 101 aa7.02□□□□□ -1.29
CHRNA1-205ENST00000409542 KRTAP19-2Q3LHN2 52 aa7.02□□□□□ -1.29
CHRNA1-205ENST00000409542 NOTCH2NLQ7Z3S9 236 aa6.99□□□□□ -1.29
CHRNA1-205ENST00000409542 NDUFS5O43920 106 aa6.98□□□□□ -1.29
CHRNA1-205ENST00000409542 MT1HP80294 61 aa6.98□□□□□ -1.29
CHRNA1-205ENST00000409542 SPINK1P00995 79 aa6.97□□□□□ -1.29
CHRNA1-205ENST00000409542 XP32Q5T750 250 aa6.96□□□□□ -1.3
CHRNA1-205ENST00000409542 Q1T7F1 81 aa6.95□□□□□ -1.3
CHRNA1-205ENST00000409542 C1orf195Q5TG92 126 aa6.94□□□□□ -1.3
CHRNA1-205ENST00000409542 MPLKIPQ8TAP9 179 aa6.94□□□□□ -1.3
CHRNA1-205ENST00000409542 LIMD2Q9BT23 127 aa6.94□□□□□ -1.3
CHRNA1-205ENST00000409542 LOC101927531A0A1B0GV80 90 aa6.92□□□□□ -1.3
CHRNA1-205ENST00000409542 LINC00313P59037 77 aa6.9□□□□□ -1.31
CHRNA1-205ENST00000409542 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.31
CHRNA1-205ENST00000409542 PCOTHQ58A44 107 aa6.9□□□□□ -1.31
CHRNA1-205ENST00000409542 V9GYY9 64 aa6.89□□□□□ -1.31
CHRNA1-205ENST00000409542 RPS29P62273 56 aaKnown RBP6.88□□□□□ -1.31
CHRNA1-205ENST00000409542 Q8N9P0 234 aaPredicted RBP6.88□□□□□ -1.31
CHRNA1-205ENST00000409542 Q5W150 140 aa6.87□□□□□ -1.31
CHRNA1-205ENST00000409542 COA5Q86WW8 74 aa6.85□□□□□ -1.31
CHRNA1-205ENST00000409542 KRTAP16-1A8MUX0 517 aa6.85□□□□□ -1.31
CHRNA1-205ENST00000409542 PRO0628Q9UI54 55 aa6.84□□□□□ -1.31
CHRNA1-205ENST00000409542 FLGP20930 4061 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms