RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
LSM5-202ENST00000409292 SVIPQ8NHG7 77 aa3.82□□□□□ -1.8
LSM5-202ENST00000409292 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
LSM5-202ENST00000409292 HRES1P13985 223 aa3.81□□□□□ -1.8
LSM5-202ENST00000409292 COA6Q5JTJ3 125 aaKnown RBP3.81□□□□□ -1.8
LSM5-202ENST00000409292 A0A1B0GX51 115 aa3.8□□□□□ -1.8
LSM5-202ENST00000409292 H3BQ85 93 aa3.8□□□□□ -1.8
LSM5-202ENST00000409292 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
LSM5-202ENST00000409292 ANKRD29Q8N6D5 301 aa3.8□□□□□ -1.8
LSM5-202ENST00000409292 IGHV6-1A0A0B4J1U7 121 aa3.79□□□□□ -1.8
LSM5-202ENST00000409292 C8orf87E5RJ46 101 aa3.79□□□□□ -1.8
LSM5-202ENST00000409292 S100A2P29034 98 aa3.79□□□□□ -1.8
LSM5-202ENST00000409292 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
LSM5-202ENST00000409292 TRBV7-4A0A0J9YYF1 115 aa3.78□□□□□ -1.8
LSM5-202ENST00000409292 DNAL4O96015 105 aa3.78□□□□□ -1.8
LSM5-202ENST00000409292 TRACP01848 142 aa3.78□□□□□ -1.8
LSM5-202ENST00000409292 LYRM7Q5U5X0 104 aa3.78□□□□□ -1.8
LSM5-202ENST00000409292 NOTCH2NLQ7Z3S9 236 aa3.78□□□□□ -1.8
LSM5-202ENST00000409292 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
LSM5-202ENST00000409292 KRTAP16-1A8MUX0 517 aa3.76□□□□□ -1.81
LSM5-202ENST00000409292 SPINK7P58062 85 aa3.76□□□□□ -1.81
LSM5-202ENST00000409292 A0A1W2PNM2 257 aa3.75□□□□□ -1.81
LSM5-202ENST00000409292 ZCCHC13Q8WW36 166 aaKnown RBP3.75□□□□□ -1.81
LSM5-202ENST00000409292 DSCR8Q96T75 97 aa3.75□□□□□ -1.81
LSM5-202ENST00000409292 A0A0B4J2C4 111 aa3.74□□□□□ -1.81
LSM5-202ENST00000409292 J3KT08 172 aa3.74□□□□□ -1.81
LSM5-202ENST00000409292 TMEM256-PLSCR3K7ERE1 68 aa3.74□□□□□ -1.81
LSM5-202ENST00000409292 NDUFB1O75438 58 aa3.74□□□□□ -1.81
LSM5-202ENST00000409292 CCKP06307 115 aa3.74□□□□□ -1.81
LSM5-202ENST00000409292 DEFB116Q30KQ4 102 aa3.74□□□□□ -1.81
LSM5-202ENST00000409292 ORMDL1Q9P0S3 153 aa3.74□□□□□ -1.81
LSM5-202ENST00000409292 A0A1B0GVX0 72 aa3.73□□□□□ -1.81
LSM5-202ENST00000409292 WFDC13Q8IUB5 93 aa3.73□□□□□ -1.81
LSM5-202ENST00000409292 LINC00472Q9H8W2 130 aa3.73□□□□□ -1.81
LSM5-202ENST00000409292 A0A1B0GV72 72 aa3.72□□□□□ -1.81
LSM5-202ENST00000409292 COX6CP09669 75 aa3.72□□□□□ -1.81
LSM5-202ENST00000409292 COX8AP10176 69 aa3.72□□□□□ -1.81
LSM5-202ENST00000409292 FAM218AQ96MZ4 157 aa3.72□□□□□ -1.81
LSM5-202ENST00000409292 VPS25Q9BRG1 176 aa3.72□□□□□ -1.81
LSM5-202ENST00000409292 PRO1854Q9UHT4 67 aa3.72□□□□□ -1.81
LSM5-202ENST00000409292 DLEU1O43261 78 aa3.71□□□□□ -1.82
LSM5-202ENST00000409292 S100A6P06703 90 aa3.71□□□□□ -1.82
LSM5-202ENST00000409292 PSMB2P49721 201 aa3.7□□□□□ -1.82
LSM5-202ENST00000409292 HIST1H2BLQ99880 126 aa3.7□□□□□ -1.82
LSM5-202ENST00000409292 HIGD1BQ9P298 99 aa3.69□□□□□ -1.82
LSM5-202ENST00000409292 UBE2V1Q13404 147 aa3.68□□□□□ -1.82
LSM5-202ENST00000409292 HIST3H2BBQ8N257 126 aa3.68□□□□□ -1.82
LSM5-202ENST00000409292 S100A1P23297 94 aa3.67□□□□□ -1.82
LSM5-202ENST00000409292 RBM3P98179 157 aaKnown RBP3.67□□□□□ -1.82
LSM5-202ENST00000409292 H1FX-AS1Q4G0G2 97 aa3.66□□□□□ -1.82
LSM5-202ENST00000409292 CEND1Q8N111 149 aa3.66□□□□□ -1.82
LSM5-202ENST00000409292 C14orf144Q96I85 54 aa3.66□□□□□ -1.82
LSM5-202ENST00000409292 IGKV3D-7A0A0C4DH55 119 aa3.65□□□□□ -1.83
LSM5-202ENST00000409292 C9JAW5 83 aa3.65□□□□□ -1.83
LSM5-202ENST00000409292 SPATA45Q537H7 98 aa3.64□□□□□ -1.83
LSM5-202ENST00000409292 NEBP20929 6669 aa3.63□□□□□ -1.83
LSM5-202ENST00000409292 A6NN06 94 aa3.63□□□□□ -1.83
LSM5-202ENST00000409292 VAMP8Q9BV40 100 aa3.63□□□□□ -1.83
LSM5-202ENST00000409292 C8orf17Q9NRJ1 99 aa3.63□□□□□ -1.83
LSM5-202ENST00000409292 PAM16Q9Y3D7 125 aa3.63□□□□□ -1.83
LSM5-202ENST00000409292 FAM236AA0A1B0GUQ0 79 aa3.62□□□□□ -1.83
LSM5-202ENST00000409292 FAM236BA0A1B0GV22 79 aa3.62□□□□□ -1.83
LSM5-202ENST00000409292 SCGB1C2P0DMR2 95 aa3.62□□□□□ -1.83
LSM5-202ENST00000409292 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
LSM5-202ENST00000409292 Q6ZVQ6 151 aa3.62□□□□□ -1.83
LSM5-202ENST00000409292 A0A1B0GW54 56 aa3.61□□□□□ -1.83
LSM5-202ENST00000409292 NDUFS5O43920 106 aa3.61□□□□□ -1.83
LSM5-202ENST00000409292 Q6ZQT0 140 aa3.61□□□□□ -1.83
LSM5-202ENST00000409292 C2orf91Q6ZV80 131 aa3.61□□□□□ -1.83
LSM5-202ENST00000409292 FXYD2P54710 66 aa3.6□□□□□ -1.83
LSM5-202ENST00000409292 JMJD7-PLA2G4BH0Y9G9 81 aa3.59□□□□□ -1.83
LSM5-202ENST00000409292 PDE6GP18545 87 aa3.59□□□□□ -1.83
LSM5-202ENST00000409292 HSD52Q0P140 79 aa3.58□□□□□ -1.84
LSM5-202ENST00000409292 Q5VV11 94 aa3.58□□□□□ -1.84
LSM5-202ENST00000409292 TMEM254Q8TBM7 123 aa3.58□□□□□ -1.84
LSM5-202ENST00000409292 MRPL34Q9BQ48 92 aaKnown RBP3.58□□□□□ -1.84
LSM5-202ENST00000409292 BAALC-AS2P0C853 105 aa3.57□□□□□ -1.84
LSM5-202ENST00000409292 C7orf65Q6ZTY9 151 aa3.57□□□□□ -1.84
LSM5-202ENST00000409292 NREPQ16612 68 aa3.56□□□□□ -1.84
LSM5-202ENST00000409292 PRR15Q8IV56 129 aa3.56□□□□□ -1.84
LSM5-202ENST00000409292 K7ERJ3 54 aa3.55□□□□□ -1.84
LSM5-202ENST00000409292 hDV103S1A0JD37 113 aa3.54□□□□□ -1.84
LSM5-202ENST00000409292 IMUPQ9GZP8 106 aa3.54□□□□□ -1.84
LSM5-202ENST00000409292 PCP4P48539 62 aa3.53□□□□□ -1.84
LSM5-202ENST00000409292 ATXN8Q156A1 80 aa3.53□□□□□ -1.84
LSM5-202ENST00000409292 CSAG1Q6PB30 78 aa3.53□□□□□ -1.84
LSM5-202ENST00000409292 LOC110117498A0A087WWA1 95 aa3.52□□□□□ -1.85
LSM5-202ENST00000409292 C5orf47Q569G3 176 aa3.52□□□□□ -1.85
LSM5-202ENST00000409292 MMP24-AS1A0A0U1RRL7 71 aa3.51□□□□□ -1.85
LSM5-202ENST00000409292 C4orf26Q17RF5 130 aa3.49□□□□□ -1.85
LSM5-202ENST00000409292 S4R3F8 94 aa3.49□□□□□ -1.85
LSM5-202ENST00000409292 KRTAP10-5P60370 271 aa3.48□□□□□ -1.85
LSM5-202ENST00000409292 UQCR10Q9UDW1 63 aa3.48□□□□□ -1.85
LSM5-202ENST00000409292 MUC12Q9UKN1 5478 aa3.48□□□□□ -1.85
LSM5-202ENST00000409292 K7EQZ3 153 aa3.47□□□□□ -1.85
LSM5-202ENST00000409292 BPY2O14599 106 aa3.47□□□□□ -1.85
LSM5-202ENST00000409292 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
LSM5-202ENST00000409292 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
LSM5-202ENST00000409292 CXCL6P80162 114 aa3.47□□□□□ -1.85
LSM5-202ENST00000409292 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms