RNA–Protein interactions for RNA: ENST00000409204.4

PCDH20-201, Transcript of protocadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH20, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20-201ENST00000409204 ZFHX3Q15911 3703 aa7.32□□□□□ -1.24
PCDH20-201ENST00000409204 CSMD2Q7Z408 3487 aa7.31□□□□□ -1.24
PCDH20-201ENST00000409204 KRTAP10-2P60368 255 aa7.31□□□□□ -1.24
PCDH20-201ENST00000409204 M0R2T5 61 aa7.31□□□□□ -1.24
PCDH20-201ENST00000409204 Q5VSD8 79 aa7.3□□□□□ -1.24
PCDH20-201ENST00000409204 FBN1P35555 2871 aaKnown RBP7.3□□□□□ -1.24
PCDH20-201ENST00000409204 Q8N9P0 234 aaPredicted RBP7.3□□□□□ -1.24
PCDH20-201ENST00000409204 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
PCDH20-201ENST00000409204 A0A1B0GU33 70 aa7.28□□□□□ -1.24
PCDH20-201ENST00000409204 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
PCDH20-201ENST00000409204 Q1T7F1 81 aa7.26□□□□□ -1.25
PCDH20-201ENST00000409204 CAMK2N1Q7Z7J9 78 aa7.26□□□□□ -1.25
PCDH20-201ENST00000409204 KRTAP4-16G5E9R7 235 aaPredicted RBP7.26□□□□□ -1.25
PCDH20-201ENST00000409204 Q6ZRN7 208 aaPredicted RBP7.26□□□□□ -1.25
PCDH20-201ENST00000409204 SPINK7P58062 85 aa7.25□□□□□ -1.25
PCDH20-201ENST00000409204 Q5W150 140 aa7.25□□□□□ -1.25
PCDH20-201ENST00000409204 KTN1-AS1Q86SY8 53 aa7.24□□□□□ -1.25
PCDH20-201ENST00000409204 LINC00483Q53H64 154 aa7.22□□□□□ -1.25
PCDH20-201ENST00000409204 LCA10Q71F78 164 aa7.21□□□□□ -1.25
PCDH20-201ENST00000409204 CUBNO60494 3623 aa7.21□□□□□ -1.26
PCDH20-201ENST00000409204 KRTAP7-1Q8IUC3 87 aa7.21□□□□□ -1.26
PCDH20-201ENST00000409204 S4R3F8 94 aa7.2□□□□□ -1.26
PCDH20-201ENST00000409204 KRTAP21-3Q3LHN1 58 aa7.2□□□□□ -1.26
PCDH20-201ENST00000409204 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
PCDH20-201ENST00000409204 LINC01558Q9Y6Z2 57 aa7.19□□□□□ -1.26
PCDH20-201ENST00000409204 FP248Q71RG6 208 aaPredicted RBP7.17□□□□□ -1.26
PCDH20-201ENST00000409204 Q75L30 129 aa7.17□□□□□ -1.26
PCDH20-201ENST00000409204 DMAC1Q96GE9 116 aa7.16□□□□□ -1.26
PCDH20-201ENST00000409204 PKD1L1Q8TDX9 2849 aa7.12□□□□□ -1.27
PCDH20-201ENST00000409204 R4GN34 69 aa7.12□□□□□ -1.27
PCDH20-201ENST00000409204 A0A087X002 238 aa7.09□□□□□ -1.27
PCDH20-201ENST00000409204 OXTP01178 125 aa7.09□□□□□ -1.27
PCDH20-201ENST00000409204 LUZP6Q538Z0 58 aa7.08□□□□□ -1.28
PCDH20-201ENST00000409204 TENM2Q9NT68 2774 aa7.08□□□□□ -1.28
PCDH20-201ENST00000409204 ANK3Q12955 4377 aaKnown RBP7.08□□□□□ -1.28
PCDH20-201ENST00000409204 CYSTM1Q9H1C7 97 aa7.05□□□□□ -1.28
PCDH20-201ENST00000409204 KRTAP29-1A8MX34 341 aaPredicted RBP7.03□□□□□ -1.28
PCDH20-201ENST00000409204 TGP01266 2768 aa7.02□□□□□ -1.29
PCDH20-201ENST00000409204 TRRAPQ9Y4A5 3859 aa7.01□□□□□ -1.29
PCDH20-201ENST00000409204 ASB16-AS1Q495Z4 193 aa7.01□□□□□ -1.29
PCDH20-201ENST00000409204 RPS29P62273 56 aaKnown RBP7□□□□□ -1.29
PCDH20-201ENST00000409204 Q5VV11 94 aa7□□□□□ -1.29
PCDH20-201ENST00000409204 KRTAP13-1Q8IUC0 172 aa7□□□□□ -1.29
PCDH20-201ENST00000409204 RPL37P61927 97 aaKnown RBP6.97□□□□□ -1.29
PCDH20-201ENST00000409204 Q5XG85 94 aa6.97□□□□□ -1.29
PCDH20-201ENST00000409204 M0QZ58 72 aa6.95□□□□□ -1.3
PCDH20-201ENST00000409204 VPS13CQ709C8 3753 aa6.93□□□□□ -1.3
PCDH20-201ENST00000409204 NOTCH2NLQ7Z3S9 236 aa6.92□□□□□ -1.3
PCDH20-201ENST00000409204 H1FX-AS1Q4G0G2 97 aa6.92□□□□□ -1.3
PCDH20-201ENST00000409204 KRTAP13-2Q52LG2 175 aa6.89□□□□□ -1.31
PCDH20-201ENST00000409204 ADM2Q7Z4H4 148 aa6.86□□□□□ -1.31
PCDH20-201ENST00000409204 PRAC1Q96KF2 57 aa6.86□□□□□ -1.31
PCDH20-201ENST00000409204 ZNF469Q96JG9 3925 aaPredicted RBP6.86□□□□□ -1.31
PCDH20-201ENST00000409204 ROMO1P60602 79 aa6.84□□□□□ -1.31
PCDH20-201ENST00000409204 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
PCDH20-201ENST00000409204 SPATA8Q6RVD6 105 aa6.78□□□□□ -1.32
PCDH20-201ENST00000409204 FBN3Q75N90 2809 aa6.71□□□□□ -1.34
PCDH20-201ENST00000409204 KRTAP1-4P0C5Y4 121 aa6.71□□□□□ -1.34
PCDH20-201ENST00000409204 A8MUU9 505 aa6.7□□□□□ -1.34
PCDH20-201ENST00000409204 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
PCDH20-201ENST00000409204 AKAP9Q99996 3911 aa6.65□□□□□ -1.34
PCDH20-201ENST00000409204 A0A0A0MQY5 61 aa6.65□□□□□ -1.34
PCDH20-201ENST00000409204 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
PCDH20-201ENST00000409204 A8MU10 97 aa6.59□□□□□ -1.35
PCDH20-201ENST00000409204 H3BS24 57 aa6.59□□□□□ -1.35
PCDH20-201ENST00000409204 MEGF8Q7Z7M0 2845 aa6.57□□□□□ -1.36
PCDH20-201ENST00000409204 A0A1B0GVY2 172 aa6.55□□□□□ -1.36
PCDH20-201ENST00000409204 COL7A1Q02388 2944 aa6.53□□□□□ -1.36
PCDH20-201ENST00000409204 XP32Q5T750 250 aa6.51□□□□□ -1.37
PCDH20-201ENST00000409204 HUWE1Q7Z6Z7 4374 aaKnown RBP6.48□□□□□ -1.37
PCDH20-201ENST00000409204 A6NN06 94 aa6.46□□□□□ -1.38
PCDH20-201ENST00000409204 KRTAP25-1Q3LHN0 102 aa6.46□□□□□ -1.38
PCDH20-201ENST00000409204 TNP1P09430 55 aa6.45□□□□□ -1.38
PCDH20-201ENST00000409204 TPRXLQ17RH7 258 aa6.45□□□□□ -1.38
PCDH20-201ENST00000409204 KRTAP16-1A8MUX0 517 aa6.4□□□□□ -1.39
PCDH20-201ENST00000409204 KRTAP10-8P60410 259 aa6.35□□□□□ -1.39
PCDH20-201ENST00000409204 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
PCDH20-201ENST00000409204 DNAH9Q9NYC9 4486 aa6.32□□□□□ -1.4
PCDH20-201ENST00000409204 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
PCDH20-201ENST00000409204 DNHD1Q96M86 4753 aa6.28□□□□□ -1.4
PCDH20-201ENST00000409204 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
PCDH20-201ENST00000409204 KRTAP10-10P60014 251 aa6.24□□□□□ -1.41
PCDH20-201ENST00000409204 PLECQ15149 4684 aaKnown RBP6.19□□□□□ -1.42
PCDH20-201ENST00000409204 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
PCDH20-201ENST00000409204 H0YAA0 97 aa6.17□□□□□ -1.42
PCDH20-201ENST00000409204 NDUFAF8A1L188 74 aa6.15□□□□□ -1.42
PCDH20-201ENST00000409204 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
PCDH20-201ENST00000409204 P0C880 135 aa6.13□□□□□ -1.43
PCDH20-201ENST00000409204 KRTAP10-4P60372 401 aaPredicted RBP6.09□□□□□ -1.43
PCDH20-201ENST00000409204 DNAH1Q9P2D7 4330 aa6.05□□□□□ -1.44
PCDH20-201ENST00000409204 PRKDCP78527 4128 aaKnown RBP6.04□□□□□ -1.44
PCDH20-201ENST00000409204 STARD9Q9P2P6 4700 aa6.04□□□□□ -1.44
PCDH20-201ENST00000409204 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
PCDH20-201ENST00000409204 DNAH5Q8TE73 4624 aa6.03□□□□□ -1.44
PCDH20-201ENST00000409204 DNAH10Q8IVF4 4471 aa6.02□□□□□ -1.45
PCDH20-201ENST00000409204 DNAH11Q96DT5 4516 aa6.01□□□□□ -1.45
PCDH20-201ENST00000409204 ANK2Q01484 3957 aa6□□□□□ -1.45
PCDH20-201ENST00000409204 VPS13DQ5THJ4 4388 aa6□□□□□ -1.45
PCDH20-201ENST00000409204 KRTAP4-5Q9BYR2 181 aa5.98□□□□□ -1.45
PCDH20-201ENST00000409204 ALMS1Q8TCU4 4167 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms