RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 M0R2T5 61 aa10.05□□□□□ -0.8
SMARCB1-204ENST00000407422 FAM240AA0A1B0GVK7 77 aa10.04□□□□□ -0.8
SMARCB1-204ENST00000407422 GHRHP01286 108 aa10.04□□□□□ -0.8
SMARCB1-204ENST00000407422 A0A1W2PNM2 257 aa10.04□□□□□ -0.8
SMARCB1-204ENST00000407422 RPS28P62857 69 aaKnown RBP10.03□□□□□ -0.8
SMARCB1-204ENST00000407422 IMUPQ9GZP8 106 aa10.03□□□□□ -0.8
SMARCB1-204ENST00000407422 C20orf166-AS1Q96NR2 134 aa10□□□□□ -0.81
SMARCB1-204ENST00000407422 J3KT08 172 aa10□□□□□ -0.81
SMARCB1-204ENST00000407422 CRCT1Q9UGL9 99 aa9.99□□□□□ -0.81
SMARCB1-204ENST00000407422 A8MUU9 505 aa9.98□□□□□ -0.81
SMARCB1-204ENST00000407422 DNAL4O96015 105 aa9.98□□□□□ -0.81
SMARCB1-204ENST00000407422 ORMDL1Q9P0S3 153 aa9.98□□□□□ -0.81
SMARCB1-204ENST00000407422 DSCR10P59022 87 aa9.97□□□□□ -0.81
SMARCB1-204ENST00000407422 ATXN8Q156A1 80 aa9.97□□□□□ -0.81
SMARCB1-204ENST00000407422 C9JAW5 83 aa9.96□□□□□ -0.81
SMARCB1-204ENST00000407422 UQCRQO14949 82 aa9.95□□□□□ -0.82
SMARCB1-204ENST00000407422 H3BT86 120 aa9.94□□□□□ -0.82
SMARCB1-204ENST00000407422 TRBV7-4A0A0J9YYF1 115 aa9.93□□□□□ -0.82
SMARCB1-204ENST00000407422 ACYP1P07311 99 aa9.93□□□□□ -0.82
SMARCB1-204ENST00000407422 TMEM256-PLSCR3K7ERE1 68 aa9.92□□□□□ -0.82
SMARCB1-204ENST00000407422 COX6CP09669 75 aa9.92□□□□□ -0.82
SMARCB1-204ENST00000407422 H3BQ85 93 aa9.91□□□□□ -0.82
SMARCB1-204ENST00000407422 IGKV4-1P06312 121 aa9.9□□□□□ -0.82
SMARCB1-204ENST00000407422 DEFB116Q30KQ4 102 aa9.89□□□□□ -0.83
SMARCB1-204ENST00000407422 CCKP06307 115 aa9.88□□□□□ -0.83
SMARCB1-204ENST00000407422 LINC00313P59037 77 aa9.88□□□□□ -0.83
SMARCB1-204ENST00000407422 KRTAP16-1A8MUX0 517 aa9.86□□□□□ -0.83
SMARCB1-204ENST00000407422 NOTCH2NLQ7Z3S9 236 aa9.86□□□□□ -0.83
SMARCB1-204ENST00000407422 LINC00472Q9H8W2 130 aa9.86□□□□□ -0.83
SMARCB1-204ENST00000407422 TRACP01848 142 aa9.85□□□□□ -0.83
SMARCB1-204ENST00000407422 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
SMARCB1-204ENST00000407422 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
SMARCB1-204ENST00000407422 COX7CP15954 63 aa9.83□□□□□ -0.84
SMARCB1-204ENST00000407422 LINC00643Q86TS7 51 aa9.83□□□□□ -0.84
SMARCB1-204ENST00000407422 TMEM258P61165 79 aa9.81□□□□□ -0.84
SMARCB1-204ENST00000407422 IGHV6-1A0A0B4J1U7 121 aa9.79□□□□□ -0.84
SMARCB1-204ENST00000407422 ATOX1O00244 68 aa9.78□□□□□ -0.84
SMARCB1-204ENST00000407422 RBM3P98179 157 aaKnown RBP9.78□□□□□ -0.84
SMARCB1-204ENST00000407422 HIST1H4AP62805 103 aaKnown RBP9.77□□□□□ -0.85
SMARCB1-204ENST00000407422 DSCR8Q96T75 97 aa9.75□□□□□ -0.85
SMARCB1-204ENST00000407422 BAALC-AS2P0C853 105 aa9.74□□□□□ -0.85
SMARCB1-204ENST00000407422 A0A1B0GVX0 72 aa9.71□□□□□ -0.85
SMARCB1-204ENST00000407422 KRTAP9-8Q9BYQ0 159 aa9.71□□□□□ -0.85
SMARCB1-204ENST00000407422 HRES1P13985 223 aa9.68□□□□□ -0.86
SMARCB1-204ENST00000407422 FAM236DA0A1B0GTK5 79 aa9.67□□□□□ -0.86
SMARCB1-204ENST00000407422 C8orf87E5RJ46 101 aa9.67□□□□□ -0.86
SMARCB1-204ENST00000407422 FAM236CP0DP71 79 aa9.67□□□□□ -0.86
SMARCB1-204ENST00000407422 MPLKIPQ8TAP9 179 aa9.67□□□□□ -0.86
SMARCB1-204ENST00000407422 Q6ZQT0 140 aa9.66□□□□□ -0.86
SMARCB1-204ENST00000407422 SERP2Q8N6R1 65 aa9.65□□□□□ -0.86
SMARCB1-204ENST00000407422 RBM12B-AS1Q9P1G2 102 aa9.63□□□□□ -0.87
SMARCB1-204ENST00000407422 PRO0628Q9UI54 55 aa9.63□□□□□ -0.87
SMARCB1-204ENST00000407422 USH2AO75445 5202 aa9.6□□□□□ -0.87
SMARCB1-204ENST00000407422 JMJD7-PLA2G4BH0Y9G9 81 aa9.58□□□□□ -0.88
SMARCB1-204ENST00000407422 C4orf26Q17RF5 130 aa9.58□□□□□ -0.88
SMARCB1-204ENST00000407422 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
SMARCB1-204ENST00000407422 LOC110117498A0A087WWA1 95 aa9.57□□□□□ -0.88
SMARCB1-204ENST00000407422 MT2AP02795 61 aa9.56□□□□□ -0.88
SMARCB1-204ENST00000407422 NDUFB1O75438 58 aa9.55□□□□□ -0.88
SMARCB1-204ENST00000407422 C14orf132Q9NPU4 83 aa9.54□□□□□ -0.88
SMARCB1-204ENST00000407422 SSPOA2VEC9 5147 aa9.54□□□□□ -0.88
SMARCB1-204ENST00000407422 Q8N9P0 234 aaPredicted RBP9.53□□□□□ -0.88
SMARCB1-204ENST00000407422 A8MWP4 228 aa9.53□□□□□ -0.88
SMARCB1-204ENST00000407422 SPINK7P58062 85 aa9.53□□□□□ -0.88
SMARCB1-204ENST00000407422 A0A1B0GW54 56 aa9.52□□□□□ -0.89
SMARCB1-204ENST00000407422 CYSTM1Q9H1C7 97 aa9.52□□□□□ -0.89
SMARCB1-204ENST00000407422 C8orf17Q9NRJ1 99 aa9.52□□□□□ -0.89
SMARCB1-204ENST00000407422 IGKV3D-7A0A0C4DH55 119 aa9.51□□□□□ -0.89
SMARCB1-204ENST00000407422 PDE6GP18545 87 aa9.5□□□□□ -0.89
SMARCB1-204ENST00000407422 SERP1Q9Y6X1 66 aa9.5□□□□□ -0.89
SMARCB1-204ENST00000407422 MT1FP04733 61 aa9.49□□□□□ -0.89
SMARCB1-204ENST00000407422 ATP5EP2Q5VTU8 51 aa9.48□□□□□ -0.89
SMARCB1-204ENST00000407422 Q6ZVQ6 151 aa9.44□□□□□ -0.9
SMARCB1-204ENST00000407422 PRR15Q8IV56 129 aa9.44□□□□□ -0.9
SMARCB1-204ENST00000407422 NREPQ16612 68 aa9.43□□□□□ -0.9
SMARCB1-204ENST00000407422 SMIM26A0A096LP01 95 aa9.42□□□□□ -0.9
SMARCB1-204ENST00000407422 KRTAP10-10P60014 251 aa9.42□□□□□ -0.9
SMARCB1-204ENST00000407422 LCE2BO14633 110 aa9.4□□□□□ -0.9
SMARCB1-204ENST00000407422 WFDC13Q8IUB5 93 aa9.4□□□□□ -0.9
SMARCB1-204ENST00000407422 KRTAP9-3Q9BYQ3 159 aa9.4□□□□□ -0.9
SMARCB1-204ENST00000407422 MMP24-AS1A0A0U1RRL7 71 aa9.38□□□□□ -0.91
SMARCB1-204ENST00000407422 ATP5EP56381 51 aaPredicted RBP9.38□□□□□ -0.91
SMARCB1-204ENST00000407422 V9GYY9 64 aa9.38□□□□□ -0.91
SMARCB1-204ENST00000407422 SEC61GP60059 68 aa9.37□□□□□ -0.91
SMARCB1-204ENST00000407422 LINC00846Q9NV44 126 aa9.37□□□□□ -0.91
SMARCB1-204ENST00000407422 K7EQZ3 153 aa9.34□□□□□ -0.91
SMARCB1-204ENST00000407422 TMEM254Q8TBM7 123 aa9.34□□□□□ -0.91
SMARCB1-204ENST00000407422 MRPL34Q9BQ48 92 aaKnown RBP9.34□□□□□ -0.91
SMARCB1-204ENST00000407422 FCGBPQ9Y6R7 5405 aaPredicted RBP9.33□□□□□ -0.92
SMARCB1-204ENST00000407422 KLKP1Q107X0 134 aa9.33□□□□□ -0.92
SMARCB1-204ENST00000407422 TRAV7A0A075B6U4 112 aa9.32□□□□□ -0.92
SMARCB1-204ENST00000407422 A0A087WVE0 104 aa9.32□□□□□ -0.92
SMARCB1-204ENST00000407422 H7BZZ5 65 aa9.32□□□□□ -0.92
SMARCB1-204ENST00000407422 NDUFC1O43677 76 aa9.32□□□□□ -0.92
SMARCB1-204ENST00000407422 hDV103S1A0JD37 113 aa9.31□□□□□ -0.92
SMARCB1-204ENST00000407422 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.31□□□□□ -0.92
SMARCB1-204ENST00000407422 NDUFS5O43920 106 aa9.28□□□□□ -0.92
SMARCB1-204ENST00000407422 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
SMARCB1-204ENST00000407422 KRTAP19-1Q8IUB9 90 aa9.26□□□□□ -0.93
SMARCB1-204ENST00000407422 BPY2O14599 106 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms