RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 Q6ZR54 194 aa9.85□□□□□ -0.83
LSP1-204ENST00000406638 WWC2-AS2Q96NR7 200 aa9.83□□□□□ -0.84
LSP1-204ENST00000406638 TP53AIP1Q9HCN2 124 aa9.81□□□□□ -0.84
LSP1-204ENST00000406638 HECTD4Q9Y4D8 3996 aa9.81□□□□□ -0.84
LSP1-204ENST00000406638 A0A087WTM6 91 aa9.81□□□□□ -0.84
LSP1-204ENST00000406638 SPRR1BP22528 89 aa9.81□□□□□ -0.84
LSP1-204ENST00000406638 PRR26Q8N8Z3 221 aa9.8□□□□□ -0.84
LSP1-204ENST00000406638 PRAC1Q96KF2 57 aa9.8□□□□□ -0.84
LSP1-204ENST00000406638 IGHV6-1A0A0B4J1U7 121 aa9.78□□□□□ -0.84
LSP1-204ENST00000406638 Q96NJ1 140 aa9.78□□□□□ -0.84
LSP1-204ENST00000406638 C8orf17Q9NRJ1 99 aa9.78□□□□□ -0.84
LSP1-204ENST00000406638 LINC00313P59037 77 aa9.78□□□□□ -0.84
LSP1-204ENST00000406638 DNAH17Q9UFH2 4485 aa9.77□□□□□ -0.84
LSP1-204ENST00000406638 ASB16-AS1Q495Z4 193 aa9.77□□□□□ -0.85
LSP1-204ENST00000406638 C14orf177Q52M58 125 aa9.77□□□□□ -0.85
LSP1-204ENST00000406638 IGLV9-49A0A0B4J1Y8 123 aa9.76□□□□□ -0.85
LSP1-204ENST00000406638 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.76□□□□□ -0.85
LSP1-204ENST00000406638 C8orf87E5RJ46 101 aa9.75□□□□□ -0.85
LSP1-204ENST00000406638 C1orf134Q5TEV5 83 aa9.75□□□□□ -0.85
LSP1-204ENST00000406638 DNAH6Q9C0G6 4158 aa9.75□□□□□ -0.85
LSP1-204ENST00000406638 ADM2Q7Z4H4 148 aa9.74□□□□□ -0.85
LSP1-204ENST00000406638 FRAS1Q86XX4 4008 aa9.71□□□□□ -0.85
LSP1-204ENST00000406638 A0A087X002 238 aa9.71□□□□□ -0.86
LSP1-204ENST00000406638 RTL8CO15255 209 aa9.71□□□□□ -0.86
LSP1-204ENST00000406638 NOTCH2NLQ7Z3S9 236 aa9.71□□□□□ -0.86
LSP1-204ENST00000406638 ALMS1Q8TCU4 4167 aa9.71□□□□□ -0.86
LSP1-204ENST00000406638 DNAH11Q96DT5 4516 aa9.7□□□□□ -0.86
LSP1-204ENST00000406638 SACSQ9NZJ4 4579 aa9.69□□□□□ -0.86
LSP1-204ENST00000406638 DNAH5Q8TE73 4624 aa9.68□□□□□ -0.86
LSP1-204ENST00000406638 A0A1B0GVX0 72 aa9.68□□□□□ -0.86
LSP1-204ENST00000406638 MRPL34Q9BQ48 92 aaKnown RBP9.68□□□□□ -0.86
LSP1-204ENST00000406638 KRTAP10-2P60368 255 aa9.68□□□□□ -0.86
LSP1-204ENST00000406638 FAT2Q9NYQ8 4349 aa9.67□□□□□ -0.86
LSP1-204ENST00000406638 DNAH8Q96JB1 4490 aa9.66□□□□□ -0.86
LSP1-204ENST00000406638 CDK2AP2O75956 126 aa9.65□□□□□ -0.86
LSP1-204ENST00000406638 IGLV5-52A0A0A0MRZ9 124 aa9.64□□□□□ -0.87
LSP1-204ENST00000406638 SPACA4Q8TDM5 124 aa9.64□□□□□ -0.87
LSP1-204ENST00000406638 Q5W150 140 aa9.64□□□□□ -0.87
LSP1-204ENST00000406638 KRTAP13-1Q8IUC0 172 aa9.59□□□□□ -0.87
LSP1-204ENST00000406638 PKD1P98161 4303 aa9.59□□□□□ -0.87
LSP1-204ENST00000406638 H3BS24 57 aa9.59□□□□□ -0.87
LSP1-204ENST00000406638 ANAPC11Q9NYG5 84 aa9.58□□□□□ -0.88
LSP1-204ENST00000406638 KMT2CQ8NEZ4 4911 aaKnown RBP9.58□□□□□ -0.88
LSP1-204ENST00000406638 ACYP2P14621 99 aa9.57□□□□□ -0.88
LSP1-204ENST00000406638 PLA2G1BP04054 148 aaKnown RBP9.57□□□□□ -0.88
LSP1-204ENST00000406638 LINC01554Q52M75 96 aa9.56□□□□□ -0.88
LSP1-204ENST00000406638 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
LSP1-204ENST00000406638 PKHD1P08F94 4074 aa9.54□□□□□ -0.88
LSP1-204ENST00000406638 A0A1B0GU69 56 aa9.53□□□□□ -0.88
LSP1-204ENST00000406638 KRTAP10-1P60331 282 aa9.52□□□□□ -0.89
LSP1-204ENST00000406638 KRTAP13-3Q3SY46 172 aa9.51□□□□□ -0.89
LSP1-204ENST00000406638 LRP1BQ9NZR2 4599 aa9.5□□□□□ -0.89
LSP1-204ENST00000406638 PSORS1C2Q9UIG4 136 aa9.49□□□□□ -0.89
LSP1-204ENST00000406638 RYR2Q92736 4967 aa9.49□□□□□ -0.89
LSP1-204ENST00000406638 SPATA8Q6RVD6 105 aa9.47□□□□□ -0.89
LSP1-204ENST00000406638 CIRBP-AS1Q8TBR5 109 aa9.47□□□□□ -0.89
LSP1-204ENST00000406638 RETNLBQ9BQ08 111 aa9.47□□□□□ -0.89
LSP1-204ENST00000406638 LINC00483Q53H64 154 aa9.47□□□□□ -0.89
LSP1-204ENST00000406638 DMAC1Q96GE9 116 aa9.45□□□□□ -0.9
LSP1-204ENST00000406638 MIR22HGQ0VDD5 57 aa9.44□□□□□ -0.9
LSP1-204ENST00000406638 UQCR11O14957 56 aa9.4□□□□□ -0.9
LSP1-204ENST00000406638 CSAG1Q6PB30 78 aa9.4□□□□□ -0.9
LSP1-204ENST00000406638 DYNC1H1Q14204 4646 aaKnown RBP9.39□□□□□ -0.91
LSP1-204ENST00000406638 ZNF706Q9Y5V0 76 aaPredicted RBP9.38□□□□□ -0.91
LSP1-204ENST00000406638 Q6ZSA8 131 aa9.36□□□□□ -0.91
LSP1-204ENST00000406638 RYR3Q15413 4870 aa9.35□□□□□ -0.91
LSP1-204ENST00000406638 VPS13BQ7Z7G8 4022 aa9.34□□□□□ -0.91
LSP1-204ENST00000406638 ZNF861PO60384 105 aa9.32□□□□□ -0.92
LSP1-204ENST00000406638 IGLV7-43P04211 117 aa9.31□□□□□ -0.92
LSP1-204ENST00000406638 FAM229AH3BQW9 127 aa9.28□□□□□ -0.92
LSP1-204ENST00000406638 IGKV2-30P06310 120 aa9.28□□□□□ -0.92
LSP1-204ENST00000406638 A0A1B0GVY2 172 aa9.27□□□□□ -0.93
LSP1-204ENST00000406638 FAT1Q14517 4588 aa9.27□□□□□ -0.93
LSP1-204ENST00000406638 SMR3BP02814 79 aaPredicted RBP9.25□□□□□ -0.93
LSP1-204ENST00000406638 APOBP04114 4563 aaKnown RBP9.24□□□□□ -0.93
LSP1-204ENST00000406638 IGKV2D-30A0A075B6S6 120 aa9.23□□□□□ -0.93
LSP1-204ENST00000406638 SPINK1P00995 79 aa9.19□□□□□ -0.94
LSP1-204ENST00000406638 KRTAP13-2Q52LG2 175 aa9.11□□□□□ -0.95
LSP1-204ENST00000406638 KRTAP1-4P0C5Y4 121 aa9.09□□□□□ -0.95
LSP1-204ENST00000406638 KRTAP16-1A8MUX0 517 aa9.09□□□□□ -0.95
LSP1-204ENST00000406638 SSBP3-AS1Q7Z2R9 100 aa9.09□□□□□ -0.95
LSP1-204ENST00000406638 Q8N1X5 172 aa9.07□□□□□ -0.96
LSP1-204ENST00000406638 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
LSP1-204ENST00000406638 EPPK1P58107 5090 aaKnown RBP9.03□□□□□ -0.96
LSP1-204ENST00000406638 KRTAP10-4P60372 401 aaPredicted RBP9.02□□□□□ -0.96
LSP1-204ENST00000406638 H0YAA0 97 aa9.02□□□□□ -0.97
LSP1-204ENST00000406638 A8MUU9 505 aa9.01□□□□□ -0.97
LSP1-204ENST00000406638 HSPG2P98160 4391 aa9.01□□□□□ -0.97
LSP1-204ENST00000406638 KRTAP25-1Q3LHN0 102 aa9.01□□□□□ -0.97
LSP1-204ENST00000406638 KRTAP17-1Q9BYP8 105 aa9.01□□□□□ -0.97
LSP1-204ENST00000406638 KIAA1109Q2LD37 5005 aa9□□□□□ -0.97
LSP1-204ENST00000406638 LINC00304Q8N9R0 145 aa9□□□□□ -0.97
LSP1-204ENST00000406638 ROMO1P60602 79 aa8.97□□□□□ -0.97
LSP1-204ENST00000406638 TYMSOSQ8TAI1 123 aa8.95□□□□□ -0.98
LSP1-204ENST00000406638 RYR1P21817 5038 aa8.95□□□□□ -0.98
LSP1-204ENST00000406638 CRIPTQ9P021 101 aa8.95□□□□□ -0.98
LSP1-204ENST00000406638 LRP1Q07954 4544 aaKnown RBP8.93□□□□□ -0.98
LSP1-204ENST00000406638 PKHD1L1Q86WI1 4243 aa8.88□□□□□ -0.99
LSP1-204ENST00000406638 A0A1B0GU33 70 aa8.88□□□□□ -0.99
LSP1-204ENST00000406638 Q5VSD8 79 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms