RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 A0A087WSZ3 146 aa5.95□□□□□ -1.46
RPAIN-204ENST00000405578 ASB16-AS1Q495Z4 193 aa5.95□□□□□ -1.46
RPAIN-204ENST00000405578 LOC110117498A0A087WWA1 95 aa5.94□□□□□ -1.46
RPAIN-204ENST00000405578 A0A1W2PNM2 257 aa5.94□□□□□ -1.46
RPAIN-204ENST00000405578 MUC17Q685J3 4493 aa5.94□□□□□ -1.46
RPAIN-204ENST00000405578 A0A1B0GW54 56 aa5.93□□□□□ -1.46
RPAIN-204ENST00000405578 OBSCN-AS1Q96MR7 158 aa5.93□□□□□ -1.46
RPAIN-204ENST00000405578 C14orf132Q9NPU4 83 aa5.93□□□□□ -1.46
RPAIN-204ENST00000405578 C1orf195Q5TG92 126 aa5.92□□□□□ -1.46
RPAIN-204ENST00000405578 FAM240AA0A1B0GVK7 77 aa5.91□□□□□ -1.46
RPAIN-204ENST00000405578 TPRXLQ17RH7 258 aa5.91□□□□□ -1.46
RPAIN-204ENST00000405578 Q6ZQT0 140 aa5.91□□□□□ -1.46
RPAIN-204ENST00000405578 ACYP1P07311 99 aa5.86□□□□□ -1.47
RPAIN-204ENST00000405578 IMUPQ9GZP8 106 aa5.86□□□□□ -1.47
RPAIN-204ENST00000405578 KRTAP13-3Q3SY46 172 aa5.85□□□□□ -1.47
RPAIN-204ENST00000405578 NREPQ16612 68 aa5.84□□□□□ -1.47
RPAIN-204ENST00000405578 J3KT08 172 aa5.83□□□□□ -1.48
RPAIN-204ENST00000405578 IGKV4-1P06312 121 aa5.83□□□□□ -1.48
RPAIN-204ENST00000405578 CCDC179H3BU77 68 aa5.82□□□□□ -1.48
RPAIN-204ENST00000405578 SMIM20Q8N5G0 67 aa5.82□□□□□ -1.48
RPAIN-204ENST00000405578 LINC00472Q9H8W2 130 aa5.82□□□□□ -1.48
RPAIN-204ENST00000405578 C9orf92A6NGG3 77 aa5.81□□□□□ -1.48
RPAIN-204ENST00000405578 Q96NJ1 140 aa5.81□□□□□ -1.48
RPAIN-204ENST00000405578 NDUFB1O75438 58 aa5.8□□□□□ -1.48
RPAIN-204ENST00000405578 DEFB116Q30KQ4 102 aa5.8□□□□□ -1.48
RPAIN-204ENST00000405578 LINC00643Q86TS7 51 aa5.78□□□□□ -1.48
RPAIN-204ENST00000405578 UBL5Q9BZL1 73 aa5.78□□□□□ -1.48
RPAIN-204ENST00000405578 UQCRQO14949 82 aa5.77□□□□□ -1.49
RPAIN-204ENST00000405578 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
RPAIN-204ENST00000405578 IGHV6-1A0A0B4J1U7 121 aa5.75□□□□□ -1.49
RPAIN-204ENST00000405578 BPY2O14599 106 aa5.75□□□□□ -1.49
RPAIN-204ENST00000405578 LINC00313P59037 77 aa5.75□□□□□ -1.49
RPAIN-204ENST00000405578 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
RPAIN-204ENST00000405578 A0A1B0GVX0 72 aa5.74□□□□□ -1.49
RPAIN-204ENST00000405578 A8MWP4 228 aa5.74□□□□□ -1.49
RPAIN-204ENST00000405578 C8orf87E5RJ46 101 aa5.74□□□□□ -1.49
RPAIN-204ENST00000405578 Q6ZVQ6 151 aa5.74□□□□□ -1.49
RPAIN-204ENST00000405578 FAM236AA0A1B0GUQ0 79 aa5.73□□□□□ -1.49
RPAIN-204ENST00000405578 FAM236BA0A1B0GV22 79 aa5.73□□□□□ -1.49
RPAIN-204ENST00000405578 KRTAP9-7A8MTY7 169 aa5.73□□□□□ -1.49
RPAIN-204ENST00000405578 ATOX1O00244 68 aa5.73□□□□□ -1.49
RPAIN-204ENST00000405578 DSCR10P59022 87 aa5.73□□□□□ -1.49
RPAIN-204ENST00000405578 RPS28P62857 69 aaKnown RBP5.73□□□□□ -1.49
RPAIN-204ENST00000405578 C5orf47Q569G3 176 aa5.73□□□□□ -1.49
RPAIN-204ENST00000405578 LINC00846Q9NV44 126 aa5.73□□□□□ -1.49
RPAIN-204ENST00000405578 KRTAP4-1Q9BYQ7 146 aa5.72□□□□□ -1.49
RPAIN-204ENST00000405578 COX7CP15954 63 aa5.7□□□□□ -1.5
RPAIN-204ENST00000405578 PRR15Q8IV56 129 aa5.7□□□□□ -1.5
RPAIN-204ENST00000405578 IGKV3D-7A0A0C4DH55 119 aa5.69□□□□□ -1.5
RPAIN-204ENST00000405578 RPL37P61927 97 aaKnown RBP5.69□□□□□ -1.5
RPAIN-204ENST00000405578 HIST1H4AP62805 103 aaKnown RBP5.69□□□□□ -1.5
RPAIN-204ENST00000405578 ATP11AUNQ6ZP68 121 aa5.69□□□□□ -1.5
RPAIN-204ENST00000405578 Q75L30 129 aa5.69□□□□□ -1.5
RPAIN-204ENST00000405578 TMEM258P61165 79 aa5.68□□□□□ -1.5
RPAIN-204ENST00000405578 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
RPAIN-204ENST00000405578 C20orf166-AS1Q96NR2 134 aa5.67□□□□□ -1.5
RPAIN-204ENST00000405578 C8orf17Q9NRJ1 99 aa5.67□□□□□ -1.5
RPAIN-204ENST00000405578 K7EQZ3 153 aa5.66□□□□□ -1.5
RPAIN-204ENST00000405578 A8MUU9 505 aa5.65□□□□□ -1.5
RPAIN-204ENST00000405578 CXCL6P80162 114 aa5.65□□□□□ -1.5
RPAIN-204ENST00000405578 PCOTHQ58A44 107 aa5.65□□□□□ -1.5
RPAIN-204ENST00000405578 NOTCH2NLQ7Z3S9 236 aa5.65□□□□□ -1.5
RPAIN-204ENST00000405578 ATP5EP2Q5VTU8 51 aa5.64□□□□□ -1.51
RPAIN-204ENST00000405578 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
RPAIN-204ENST00000405578 SERP2Q8N6R1 65 aa5.63□□□□□ -1.51
RPAIN-204ENST00000405578 hDV103S1A0JD37 113 aa5.62□□□□□ -1.51
RPAIN-204ENST00000405578 MT1HP80294 61 aa5.62□□□□□ -1.51
RPAIN-204ENST00000405578 Q8N9L7 120 aa5.62□□□□□ -1.51
RPAIN-204ENST00000405578 TMEM254Q8TBM7 123 aa5.62□□□□□ -1.51
RPAIN-204ENST00000405578 MMP24-AS1A0A0U1RRL7 71 aa5.6□□□□□ -1.51
RPAIN-204ENST00000405578 MRPL34Q9BQ48 92 aaKnown RBP5.6□□□□□ -1.51
RPAIN-204ENST00000405578 CASC2Q6XLA1 102 aa5.59□□□□□ -1.51
RPAIN-204ENST00000405578 Q8N9P0 234 aaPredicted RBP5.59□□□□□ -1.51
RPAIN-204ENST00000405578 NDUFS5O43920 106 aa5.58□□□□□ -1.52
RPAIN-204ENST00000405578 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
RPAIN-204ENST00000405578 KRTAP19-2Q3LHN2 52 aa5.58□□□□□ -1.52
RPAIN-204ENST00000405578 HCG22E2RYF7 251 aa5.57□□□□□ -1.52
RPAIN-204ENST00000405578 WFDC13Q8IUB5 93 aa5.57□□□□□ -1.52
RPAIN-204ENST00000405578 KRTAP4-12Q9BQ66 201 aa5.57□□□□□ -1.52
RPAIN-204ENST00000405578 ZCCHC13Q8WW36 166 aaKnown RBP5.55□□□□□ -1.52
RPAIN-204ENST00000405578 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
RPAIN-204ENST00000405578 KRTAP19-1Q8IUB9 90 aa5.5□□□□□ -1.53
RPAIN-204ENST00000405578 SERP1Q9Y6X1 66 aa5.5□□□□□ -1.53
RPAIN-204ENST00000405578 FAM236DA0A1B0GTK5 79 aa5.49□□□□□ -1.53
RPAIN-204ENST00000405578 FAM236CP0DP71 79 aa5.49□□□□□ -1.53
RPAIN-204ENST00000405578 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
RPAIN-204ENST00000405578 TP53AIP1Q9HCN2 124 aa5.49□□□□□ -1.53
RPAIN-204ENST00000405578 TRAV7A0A075B6U4 112 aa5.48□□□□□ -1.53
RPAIN-204ENST00000405578 M0R2T5 61 aa5.48□□□□□ -1.53
RPAIN-204ENST00000405578 NDUFC1O43677 76 aa5.47□□□□□ -1.53
RPAIN-204ENST00000405578 CYSTM1Q9H1C7 97 aa5.46□□□□□ -1.54
RPAIN-204ENST00000405578 A0A087WVE0 104 aa5.45□□□□□ -1.54
RPAIN-204ENST00000405578 SPINK7P58062 85 aa5.45□□□□□ -1.54
RPAIN-204ENST00000405578 COX6B2Q6YFQ2 88 aa5.45□□□□□ -1.54
RPAIN-204ENST00000405578 PRO0628Q9UI54 55 aa5.45□□□□□ -1.54
RPAIN-204ENST00000405578 KLKP1Q107X0 134 aa5.44□□□□□ -1.54
RPAIN-204ENST00000405578 SMIM26A0A096LP01 95 aa5.43□□□□□ -1.54
RPAIN-204ENST00000405578 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
RPAIN-204ENST00000405578 C4orf26Q17RF5 130 aa5.42□□□□□ -1.54
RPAIN-204ENST00000405578 C20orf197Q8N268 126 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms