RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 LINC00846Q9NV44 126 aa4.26□□□□□ -1.73
USP16-204ENST00000399976 RBM3P98179 157 aaKnown RBP4.24□□□□□ -1.73
USP16-204ENST00000399976 C14orf132Q9NPU4 83 aa4.23□□□□□ -1.73
USP16-204ENST00000399976 KRTAP13-3Q3SY46 172 aa4.23□□□□□ -1.73
USP16-204ENST00000399976 IGLV7-46A0A075B6I9 117 aa4.22□□□□□ -1.73
USP16-204ENST00000399976 C1orf195Q5TG92 126 aa4.22□□□□□ -1.73
USP16-204ENST00000399976 DSCR8Q96T75 97 aa4.22□□□□□ -1.73
USP16-204ENST00000399976 A0A1W2PNM2 257 aa4.21□□□□□ -1.74
USP16-204ENST00000399976 HRCT1Q6UXD1 115 aa4.21□□□□□ -1.74
USP16-204ENST00000399976 C4orf26Q17RF5 130 aa4.2□□□□□ -1.74
USP16-204ENST00000399976 Q6ZQT0 140 aa4.2□□□□□ -1.74
USP16-204ENST00000399976 CXCL6P80162 114 aa4.2□□□□□ -1.74
USP16-204ENST00000399976 CYSTM1Q9H1C7 97 aa4.2□□□□□ -1.74
USP16-204ENST00000399976 HMCN2Q8NDA2 5059 aa4.19□□□□□ -1.74
USP16-204ENST00000399976 TRAV7A0A075B6U4 112 aa4.19□□□□□ -1.74
USP16-204ENST00000399976 KLKP1Q107X0 134 aa4.19□□□□□ -1.74
USP16-204ENST00000399976 Q96NJ1 140 aa4.18□□□□□ -1.74
USP16-204ENST00000399976 UBL5Q9BZL1 73 aa4.18□□□□□ -1.74
USP16-204ENST00000399976 IGKV3D-7A0A0C4DH55 119 aa4.18□□□□□ -1.74
USP16-204ENST00000399976 PRR4Q16378 134 aa4.18□□□□□ -1.74
USP16-204ENST00000399976 V9GYY9 64 aa4.17□□□□□ -1.74
USP16-204ENST00000399976 NDUFC1O43677 76 aa4.17□□□□□ -1.74
USP16-204ENST00000399976 LINC00472Q9H8W2 130 aa4.17□□□□□ -1.74
USP16-204ENST00000399976 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
USP16-204ENST00000399976 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
USP16-204ENST00000399976 SERP1Q9Y6X1 66 aa4.16□□□□□ -1.74
USP16-204ENST00000399976 A0A087WVE0 104 aa4.16□□□□□ -1.74
USP16-204ENST00000399976 HERC1Q15751 4861 aa4.15□□□□□ -1.74
USP16-204ENST00000399976 H7BZZ5 65 aa4.15□□□□□ -1.75
USP16-204ENST00000399976 A0A087WSZ3 146 aa4.14□□□□□ -1.75
USP16-204ENST00000399976 C8orf87E5RJ46 101 aa4.14□□□□□ -1.75
USP16-204ENST00000399976 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
USP16-204ENST00000399976 FAM236DA0A1B0GTK5 79 aa4.13□□□□□ -1.75
USP16-204ENST00000399976 FAM236CP0DP71 79 aa4.13□□□□□ -1.75
USP16-204ENST00000399976 RETNLBQ9BQ08 111 aa4.13□□□□□ -1.75
USP16-204ENST00000399976 SEC61BP60468 96 aaKnown RBP4.13□□□□□ -1.75
USP16-204ENST00000399976 Q6ZVQ6 151 aa4.13□□□□□ -1.75
USP16-204ENST00000399976 KRTAP4-8Q9BYQ9 185 aa4.13□□□□□ -1.75
USP16-204ENST00000399976 Q75L30 129 aa4.12□□□□□ -1.75
USP16-204ENST00000399976 A0A0G2JQZ4 141 aa4.11□□□□□ -1.75
USP16-204ENST00000399976 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
USP16-204ENST00000399976 RPL37P61927 97 aaKnown RBP4.11□□□□□ -1.75
USP16-204ENST00000399976 SMIM26A0A096LP01 95 aa4.1□□□□□ -1.75
USP16-204ENST00000399976 A8MUU9 505 aa4.1□□□□□ -1.75
USP16-204ENST00000399976 C20orf197Q8N268 126 aa4.1□□□□□ -1.75
USP16-204ENST00000399976 A0A0U1RQV1 116 aa4.09□□□□□ -1.75
USP16-204ENST00000399976 A0A1B0GVX0 72 aa4.08□□□□□ -1.76
USP16-204ENST00000399976 A8MWP4 228 aa4.08□□□□□ -1.76
USP16-204ENST00000399976 KRTAP16-1A8MUX0 517 aa4.07□□□□□ -1.76
USP16-204ENST00000399976 NDUFB1O75438 58 aa4.07□□□□□ -1.76
USP16-204ENST00000399976 IGKV4-1P06312 121 aa4.07□□□□□ -1.76
USP16-204ENST00000399976 NREPQ16612 68 aa4.06□□□□□ -1.76
USP16-204ENST00000399976 OCR1Q9BZK8 76 aa4.06□□□□□ -1.76
USP16-204ENST00000399976 LINC00313P59037 77 aa4.05□□□□□ -1.76
USP16-204ENST00000399976 PRR15Q8IV56 129 aa4.05□□□□□ -1.76
USP16-204ENST00000399976 Q8N9P0 234 aaPredicted RBP4.04□□□□□ -1.76
USP16-204ENST00000399976 BPY2O14599 106 aa4.04□□□□□ -1.76
USP16-204ENST00000399976 TMEM254Q8TBM7 123 aa4.04□□□□□ -1.76
USP16-204ENST00000399976 DSCR10P59022 87 aa4.02□□□□□ -1.77
USP16-204ENST00000399976 C8orf17Q9NRJ1 99 aa4.02□□□□□ -1.77
USP16-204ENST00000399976 C9orf92A6NGG3 77 aa4□□□□□ -1.77
USP16-204ENST00000399976 BRK1Q8WUW1 75 aa4□□□□□ -1.77
USP16-204ENST00000399976 LPAP08519 4548 aa4□□□□□ -1.77
USP16-204ENST00000399976 MMP24-AS1A0A0U1RRL7 71 aa4□□□□□ -1.77
USP16-204ENST00000399976 ZCCHC13Q8WW36 166 aaKnown RBP4□□□□□ -1.77
USP16-204ENST00000399976 ATP11AUNQ6ZP68 121 aa3.99□□□□□ -1.77
USP16-204ENST00000399976 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
USP16-204ENST00000399976 SNURFQ9Y675 71 aa3.99□□□□□ -1.77
USP16-204ENST00000399976 LRP2P98164 4655 aa3.99□□□□□ -1.77
USP16-204ENST00000399976 IGHV6-1A0A0B4J1U7 121 aa3.98□□□□□ -1.77
USP16-204ENST00000399976 CYP4F30PQ9H0H9 118 aa3.98□□□□□ -1.77
USP16-204ENST00000399976 Q1T7F1 81 aa3.97□□□□□ -1.77
USP16-204ENST00000399976 KRTAP4-8A0A0G2JLE6 195 aa3.97□□□□□ -1.77
USP16-204ENST00000399976 MRPL34Q9BQ48 92 aaKnown RBP3.97□□□□□ -1.77
USP16-204ENST00000399976 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.77
USP16-204ENST00000399976 hDV103S1A0JD37 113 aa3.96□□□□□ -1.78
USP16-204ENST00000399976 PMAIP1Q13794 54 aa3.96□□□□□ -1.78
USP16-204ENST00000399976 PCOTHQ58A44 107 aa3.96□□□□□ -1.78
USP16-204ENST00000399976 K7EQZ3 153 aa3.96□□□□□ -1.78
USP16-204ENST00000399976 NOTCH2NLQ7Z3S9 236 aa3.95□□□□□ -1.78
USP16-204ENST00000399976 DEFB116Q30KQ4 102 aa3.94□□□□□ -1.78
USP16-204ENST00000399976 WFDC13Q8IUB5 93 aa3.94□□□□□ -1.78
USP16-204ENST00000399976 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
USP16-204ENST00000399976 TP53AIP1Q9HCN2 124 aa3.94□□□□□ -1.78
USP16-204ENST00000399976 KRTAP4-1Q9BYQ7 146 aa3.93□□□□□ -1.78
USP16-204ENST00000399976 HCG22E2RYF7 251 aa3.93□□□□□ -1.78
USP16-204ENST00000399976 H3BPC8 53 aa3.93□□□□□ -1.78
USP16-204ENST00000399976 KRTAP19-2Q3LHN2 52 aa3.92□□□□□ -1.78
USP16-204ENST00000399976 MPLKIPQ8TAP9 179 aa3.92□□□□□ -1.78
USP16-204ENST00000399976 H3BS24 57 aa3.92□□□□□ -1.78
USP16-204ENST00000399976 CASC2Q6XLA1 102 aa3.92□□□□□ -1.78
USP16-204ENST00000399976 SPANXA2-OT1Q8N9U9 137 aa3.92□□□□□ -1.78
USP16-204ENST00000399976 Q8N9L7 120 aa3.91□□□□□ -1.78
USP16-204ENST00000399976 LCE2AQ5TA79 106 aaPredicted RBP3.9□□□□□ -1.78
USP16-204ENST00000399976 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.79
USP16-204ENST00000399976 UBR4Q5T4S7 5183 aa3.89□□□□□ -1.79
USP16-204ENST00000399976 C1orf64Q8NEQ6 169 aa3.89□□□□□ -1.79
USP16-204ENST00000399976 LCE2CQ5TA81 110 aa3.88□□□□□ -1.79
USP16-204ENST00000399976 KRTAP9-6A0A140TA67 174 aa3.87□□□□□ -1.79
USP16-204ENST00000399976 HRES1P13985 223 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms