RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 MAST4O15021 2626 aa5.03□□□□□ -1.6
RETREG1-202ENST00000399793 TENM3Q9P273 2699 aa5.02□□□□□ -1.61
RETREG1-202ENST00000399793 Q6ZSA8 131 aa5.01□□□□□ -1.61
RETREG1-202ENST00000399793 FAM229AH3BQW9 127 aa5.01□□□□□ -1.61
RETREG1-202ENST00000399793 LY6G6CO95867 125 aa5.01□□□□□ -1.61
RETREG1-202ENST00000399793 SPINK1P00995 79 aa5.01□□□□□ -1.61
RETREG1-202ENST00000399793 TEP1Q99973 2627 aaKnown RBP5.01□□□□□ -1.61
RETREG1-202ENST00000399793 NOTCH2Q04721 2471 aa5□□□□□ -1.61
RETREG1-202ENST00000399793 WWC2-AS2Q96NR7 200 aa4.99□□□□□ -1.61
RETREG1-202ENST00000399793 NBEAL1Q6ZS30 2694 aa4.99□□□□□ -1.61
RETREG1-202ENST00000399793 SSBP3-AS1Q7Z2R9 100 aa4.99□□□□□ -1.61
RETREG1-202ENST00000399793 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
RETREG1-202ENST00000399793 KRTAP1-1Q07627 177 aa4.98□□□□□ -1.61
RETREG1-202ENST00000399793 ANAPC11Q9NYG5 84 aa4.98□□□□□ -1.61
RETREG1-202ENST00000399793 DNAH10Q8IVF4 4471 aa4.98□□□□□ -1.61
RETREG1-202ENST00000399793 PANO1I0J062 215 aa4.97□□□□□ -1.61
RETREG1-202ENST00000399793 KMT2BQ9UMN6 2715 aaPredicted RBP4.97□□□□□ -1.61
RETREG1-202ENST00000399793 KRTAP16-1A8MUX0 517 aa4.96□□□□□ -1.62
RETREG1-202ENST00000399793 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.62
RETREG1-202ENST00000399793 TENM1Q9UKZ4 2725 aa4.96□□□□□ -1.62
RETREG1-202ENST00000399793 IGKV2D-30A0A075B6S6 120 aa4.96□□□□□ -1.62
RETREG1-202ENST00000399793 C20orf166-AS1Q96NR2 134 aa4.95□□□□□ -1.62
RETREG1-202ENST00000399793 TENM4Q6N022 2769 aa4.95□□□□□ -1.62
RETREG1-202ENST00000399793 C14orf177Q52M58 125 aa4.94□□□□□ -1.62
RETREG1-202ENST00000399793 PSORS1C2Q9UIG4 136 aa4.94□□□□□ -1.62
RETREG1-202ENST00000399793 IGSF10Q6WRI0 2623 aa4.94□□□□□ -1.62
RETREG1-202ENST00000399793 A0A087WTM6 91 aa4.93□□□□□ -1.62
RETREG1-202ENST00000399793 LYSTQ99698 3801 aa4.93□□□□□ -1.62
RETREG1-202ENST00000399793 MEGF8Q7Z7M0 2845 aa4.93□□□□□ -1.62
RETREG1-202ENST00000399793 A0A1B0GU33 70 aa4.92□□□□□ -1.62
RETREG1-202ENST00000399793 NUPR2A6NF83 97 aa4.92□□□□□ -1.62
RETREG1-202ENST00000399793 KRTAP1-5Q9BYS1 174 aa4.92□□□□□ -1.62
RETREG1-202ENST00000399793 TYMSOSQ8TAI1 123 aa4.91□□□□□ -1.62
RETREG1-202ENST00000399793 Q8N1X5 172 aa4.89□□□□□ -1.63
RETREG1-202ENST00000399793 CIRBP-AS1Q8TBR5 109 aa4.89□□□□□ -1.63
RETREG1-202ENST00000399793 ANK2Q01484 3957 aa4.89□□□□□ -1.63
RETREG1-202ENST00000399793 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
RETREG1-202ENST00000399793 K7ERS5 55 aa4.88□□□□□ -1.63
RETREG1-202ENST00000399793 H1FX-AS1Q4G0G2 97 aa4.88□□□□□ -1.63
RETREG1-202ENST00000399793 ATRQ13535 2644 aa4.87□□□□□ -1.63
RETREG1-202ENST00000399793 KRTAP10-11P60412 298 aa4.87□□□□□ -1.63
RETREG1-202ENST00000399793 TPRXLQ17RH7 258 aa4.86□□□□□ -1.63
RETREG1-202ENST00000399793 NOTCH1P46531 2555 aa4.85□□□□□ -1.63
RETREG1-202ENST00000399793 ITPR2Q14571 2701 aa4.85□□□□□ -1.63
RETREG1-202ENST00000399793 SMR3AQ99954 134 aa4.85□□□□□ -1.63
RETREG1-202ENST00000399793 DNAH9Q9NYC9 4486 aa4.84□□□□□ -1.63
RETREG1-202ENST00000399793 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.84□□□□□ -1.63
RETREG1-202ENST00000399793 FRAS1Q86XX4 4008 aa4.84□□□□□ -1.63
RETREG1-202ENST00000399793 DNAH8Q96JB1 4490 aa4.81□□□□□ -1.64
RETREG1-202ENST00000399793 TGP01266 2768 aa4.8□□□□□ -1.64
RETREG1-202ENST00000399793 SPACA4Q8TDM5 124 aa4.8□□□□□ -1.64
RETREG1-202ENST00000399793 NSD1Q96L73 2696 aaPredicted RBP4.79□□□□□ -1.64
RETREG1-202ENST00000399793 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
RETREG1-202ENST00000399793 COL6A5A8TX70 2615 aa4.77□□□□□ -1.65
RETREG1-202ENST00000399793 COX6B2Q6YFQ2 88 aa4.76□□□□□ -1.65
RETREG1-202ENST00000399793 UBE2DNLQ8IWF7 75 aa4.74□□□□□ -1.65
RETREG1-202ENST00000399793 J3QKU1 62 aa4.73□□□□□ -1.65
RETREG1-202ENST00000399793 DNAH17Q9UFH2 4485 aa4.73□□□□□ -1.65
RETREG1-202ENST00000399793 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
RETREG1-202ENST00000399793 NBDYA0A0U1RRE5 68 aa4.72□□□□□ -1.65
RETREG1-202ENST00000399793 RPL37P61927 97 aaKnown RBP4.71□□□□□ -1.66
RETREG1-202ENST00000399793 STAB2Q8WWQ8 2551 aa4.71□□□□□ -1.66
RETREG1-202ENST00000399793 CMYA5Q8N3K9 4069 aa4.7□□□□□ -1.66
RETREG1-202ENST00000399793 KRTAP3-1Q9BYR8 98 aa4.69□□□□□ -1.66
RETREG1-202ENST00000399793 KRTAP24-1Q3LI83 254 aa4.67□□□□□ -1.66
RETREG1-202ENST00000399793 Q6ZRN7 208 aaPredicted RBP4.67□□□□□ -1.66
RETREG1-202ENST00000399793 DMBT1Q9UGM3 2413 aaPredicted RBP4.66□□□□□ -1.66
RETREG1-202ENST00000399793 DNAH7Q8WXX0 4024 aa4.66□□□□□ -1.66
RETREG1-202ENST00000399793 A0A0D9SG42 100 aa4.66□□□□□ -1.66
RETREG1-202ENST00000399793 KRTAP13-2Q52LG2 175 aa4.65□□□□□ -1.66
RETREG1-202ENST00000399793 HUWE1Q7Z6Z7 4374 aaKnown RBP4.65□□□□□ -1.67
RETREG1-202ENST00000399793 DNAH3Q8TD57 4116 aa4.64□□□□□ -1.67
RETREG1-202ENST00000399793 LCE2DQ5TA82 110 aaPredicted RBP4.64□□□□□ -1.67
RETREG1-202ENST00000399793 APLNQ9ULZ1 77 aa4.64□□□□□ -1.67
RETREG1-202ENST00000399793 KRTAP13-4Q3LI77 160 aa4.62□□□□□ -1.67
RETREG1-202ENST00000399793 HECTD4Q9Y4D8 3996 aa4.62□□□□□ -1.67
RETREG1-202ENST00000399793 VPS13DQ5THJ4 4388 aa4.61□□□□□ -1.67
RETREG1-202ENST00000399793 KMT2AQ03164 3969 aa4.6□□□□□ -1.67
RETREG1-202ENST00000399793 FBN3Q75N90 2809 aa4.58□□□□□ -1.68
RETREG1-202ENST00000399793 STAB1Q9NY15 2570 aa4.57□□□□□ -1.68
RETREG1-202ENST00000399793 KRTAP10-6P60371 365 aaPredicted RBP4.57□□□□□ -1.68
RETREG1-202ENST00000399793 S4R3F8 94 aa4.55□□□□□ -1.68
RETREG1-202ENST00000399793 MGAM2Q2M2H8 2515 aa4.54□□□□□ -1.68
RETREG1-202ENST00000399793 PLECQ15149 4684 aaKnown RBP4.53□□□□□ -1.68
RETREG1-202ENST00000399793 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
RETREG1-202ENST00000399793 KRTAP3-2Q9BYR7 98 aa4.5□□□□□ -1.69
RETREG1-202ENST00000399793 XP32Q5T750 250 aa4.5□□□□□ -1.69
RETREG1-202ENST00000399793 DYNC2H1Q8NCM8 4307 aaKnown RBP4.49□□□□□ -1.69
RETREG1-202ENST00000399793 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
RETREG1-202ENST00000399793 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
RETREG1-202ENST00000399793 KRTAP1-4P0C5Y4 121 aa4.48□□□□□ -1.69
RETREG1-202ENST00000399793 C9orf92A6NGG3 77 aa4.47□□□□□ -1.69
RETREG1-202ENST00000399793 DNAH2Q9P225 4427 aa4.46□□□□□ -1.7
RETREG1-202ENST00000399793 KRTAP3-3Q9BYR6 98 aa4.45□□□□□ -1.7
RETREG1-202ENST00000399793 DNAH11Q96DT5 4516 aa4.44□□□□□ -1.7
RETREG1-202ENST00000399793 SEC61BP60468 96 aaKnown RBP4.44□□□□□ -1.7
RETREG1-202ENST00000399793 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
RETREG1-202ENST00000399793 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
RETREG1-202ENST00000399793 PRKDCP78527 4128 aaKnown RBP4.42□□□□□ -1.7
RETREG1-202ENST00000399793 DNAH6Q9C0G6 4158 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms