RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 SPINK6Q6UWN8 80 aa6.28□□□□□ -1.4
ITSN1-207ENST00000399338 DNAH10Q8IVF4 4471 aa6.28□□□□□ -1.4
ITSN1-207ENST00000399338 IGKV2D-30A0A075B6S6 120 aa6.28□□□□□ -1.4
ITSN1-207ENST00000399338 NUPR2A6NF83 97 aa6.28□□□□□ -1.4
ITSN1-207ENST00000399338 FAM208BQ5VWN6 2430 aa6.27□□□□□ -1.4
ITSN1-207ENST00000399338 PSORS1C2Q9UIG4 136 aa6.26□□□□□ -1.41
ITSN1-207ENST00000399338 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
ITSN1-207ENST00000399338 SSBP3-AS1Q7Z2R9 100 aa6.26□□□□□ -1.41
ITSN1-207ENST00000399338 ABCA12Q86UK0 2595 aa6.25□□□□□ -1.41
ITSN1-207ENST00000399338 PDZD2O15018 2839 aa6.25□□□□□ -1.41
ITSN1-207ENST00000399338 ANK2Q01484 3957 aa6.25□□□□□ -1.41
ITSN1-207ENST00000399338 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
ITSN1-207ENST00000399338 USP24Q9UPU5 2620 aa6.25□□□□□ -1.41
ITSN1-207ENST00000399338 SPINT4Q6UDR6 99 aa6.24□□□□□ -1.41
ITSN1-207ENST00000399338 FLNAP21333 2647 aaKnown RBP6.24□□□□□ -1.41
ITSN1-207ENST00000399338 SPINK1P00995 79 aa6.23□□□□□ -1.41
ITSN1-207ENST00000399338 COL7A1Q02388 2944 aa6.22□□□□□ -1.41
ITSN1-207ENST00000399338 A0A1B0GU33 70 aa6.21□□□□□ -1.41
ITSN1-207ENST00000399338 SMR3AQ99954 134 aa6.21□□□□□ -1.41
ITSN1-207ENST00000399338 FRAS1Q86XX4 4008 aa6.21□□□□□ -1.42
ITSN1-207ENST00000399338 HECTD1Q9ULT8 2610 aa6.21□□□□□ -1.42
ITSN1-207ENST00000399338 C14orf177Q52M58 125 aa6.2□□□□□ -1.42
ITSN1-207ENST00000399338 HELZ2Q9BYK8 2649 aaKnown RBP6.2□□□□□ -1.42
ITSN1-207ENST00000399338 TYMSOSQ8TAI1 123 aa6.19□□□□□ -1.42
ITSN1-207ENST00000399338 ANAPC11Q9NYG5 84 aa6.19□□□□□ -1.42
ITSN1-207ENST00000399338 H1FX-AS1Q4G0G2 97 aa6.18□□□□□ -1.42
ITSN1-207ENST00000399338 TENM3Q9P273 2699 aa6.18□□□□□ -1.42
ITSN1-207ENST00000399338 TENM4Q6N022 2769 aa6.17□□□□□ -1.42
ITSN1-207ENST00000399338 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
ITSN1-207ENST00000399338 MEGF8Q7Z7M0 2845 aa6.16□□□□□ -1.42
ITSN1-207ENST00000399338 KRTAP1-5Q9BYS1 174 aa6.15□□□□□ -1.42
ITSN1-207ENST00000399338 DNAH8Q96JB1 4490 aa6.15□□□□□ -1.43
ITSN1-207ENST00000399338 K7ERS5 55 aa6.14□□□□□ -1.43
ITSN1-207ENST00000399338 DNAH9Q9NYC9 4486 aa6.14□□□□□ -1.43
ITSN1-207ENST00000399338 J3QKU1 62 aa6.14□□□□□ -1.43
ITSN1-207ENST00000399338 NBEAL1Q6ZS30 2694 aa6.12□□□□□ -1.43
ITSN1-207ENST00000399338 KRTAP10-11P60412 298 aa6.11□□□□□ -1.43
ITSN1-207ENST00000399338 Q8N1X5 172 aa6.11□□□□□ -1.43
ITSN1-207ENST00000399338 TEP1Q99973 2627 aaKnown RBP6.1□□□□□ -1.43
ITSN1-207ENST00000399338 TENM1Q9UKZ4 2725 aa6.09□□□□□ -1.43
ITSN1-207ENST00000399338 ACANP16112 2415 aa6.08□□□□□ -1.44
ITSN1-207ENST00000399338 CIRBP-AS1Q8TBR5 109 aa6.08□□□□□ -1.44
ITSN1-207ENST00000399338 SPACA4Q8TDM5 124 aa6.05□□□□□ -1.44
ITSN1-207ENST00000399338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
ITSN1-207ENST00000399338 DNAH17Q9UFH2 4485 aa6.02□□□□□ -1.45
ITSN1-207ENST00000399338 COX6B2Q6YFQ2 88 aa6.02□□□□□ -1.45
ITSN1-207ENST00000399338 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
ITSN1-207ENST00000399338 LUZP6Q538Z0 58 aa6.01□□□□□ -1.45
ITSN1-207ENST00000399338 NOTCH2Q04721 2471 aa6.01□□□□□ -1.45
ITSN1-207ENST00000399338 NBDYA0A0U1RRE5 68 aa6.01□□□□□ -1.45
ITSN1-207ENST00000399338 DNAH3Q8TD57 4116 aa5.98□□□□□ -1.45
ITSN1-207ENST00000399338 ITPR2Q14571 2701 aa5.98□□□□□ -1.45
ITSN1-207ENST00000399338 CMYA5Q8N3K9 4069 aa5.97□□□□□ -1.45
ITSN1-207ENST00000399338 RPL37P61927 97 aaKnown RBP5.96□□□□□ -1.46
ITSN1-207ENST00000399338 FLNBO75369 2602 aaKnown RBP5.95□□□□□ -1.46
ITSN1-207ENST00000399338 NSD1Q96L73 2696 aaPredicted RBP5.95□□□□□ -1.46
ITSN1-207ENST00000399338 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
ITSN1-207ENST00000399338 TGP01266 2768 aa5.94□□□□□ -1.46
ITSN1-207ENST00000399338 FASNP49327 2511 aaKnown RBP5.93□□□□□ -1.46
ITSN1-207ENST00000399338 VPS13DQ5THJ4 4388 aa5.92□□□□□ -1.46
ITSN1-207ENST00000399338 NOTCH1P46531 2555 aa5.92□□□□□ -1.46
ITSN1-207ENST00000399338 HUWE1Q7Z6Z7 4374 aaKnown RBP5.91□□□□□ -1.46
ITSN1-207ENST00000399338 MAST4O15021 2626 aa5.91□□□□□ -1.46
ITSN1-207ENST00000399338 KRTAP24-1Q3LI83 254 aa5.9□□□□□ -1.46
ITSN1-207ENST00000399338 ATRQ13535 2644 aa5.9□□□□□ -1.46
ITSN1-207ENST00000399338 Q6ZRN7 208 aaPredicted RBP5.88□□□□□ -1.47
ITSN1-207ENST00000399338 HECTD4Q9Y4D8 3996 aa5.87□□□□□ -1.47
ITSN1-207ENST00000399338 DNAH7Q8WXX0 4024 aa5.87□□□□□ -1.47
ITSN1-207ENST00000399338 UBE2DNLQ8IWF7 75 aa5.86□□□□□ -1.47
ITSN1-207ENST00000399338 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
ITSN1-207ENST00000399338 KRTAP13-2Q52LG2 175 aa5.85□□□□□ -1.47
ITSN1-207ENST00000399338 KMT2AQ03164 3969 aa5.83□□□□□ -1.48
ITSN1-207ENST00000399338 APLNQ9ULZ1 77 aa5.82□□□□□ -1.48
ITSN1-207ENST00000399338 DYNC2H1Q8NCM8 4307 aaKnown RBP5.81□□□□□ -1.48
ITSN1-207ENST00000399338 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
ITSN1-207ENST00000399338 A0A0D9SG42 100 aa5.81□□□□□ -1.48
ITSN1-207ENST00000399338 STAB2Q8WWQ8 2551 aa5.78□□□□□ -1.48
ITSN1-207ENST00000399338 COL6A5A8TX70 2615 aa5.76□□□□□ -1.49
ITSN1-207ENST00000399338 KRTAP3-2Q9BYR7 98 aa5.76□□□□□ -1.49
ITSN1-207ENST00000399338 PRKDCP78527 4128 aaKnown RBP5.75□□□□□ -1.49
ITSN1-207ENST00000399338 S4R3F8 94 aa5.75□□□□□ -1.49
ITSN1-207ENST00000399338 XP32Q5T750 250 aa5.74□□□□□ -1.49
ITSN1-207ENST00000399338 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
ITSN1-207ENST00000399338 FBN3Q75N90 2809 aa5.73□□□□□ -1.49
ITSN1-207ENST00000399338 DNAH6Q9C0G6 4158 aa5.72□□□□□ -1.49
ITSN1-207ENST00000399338 KRTAP12-2P59991 146 aa5.71□□□□□ -1.5
ITSN1-207ENST00000399338 PLECQ15149 4684 aaKnown RBP5.7□□□□□ -1.5
ITSN1-207ENST00000399338 DNAH2Q9P225 4427 aa5.68□□□□□ -1.5
ITSN1-207ENST00000399338 DMBT1Q9UGM3 2413 aaPredicted RBP5.67□□□□□ -1.5
ITSN1-207ENST00000399338 DNAH11Q96DT5 4516 aa5.66□□□□□ -1.5
ITSN1-207ENST00000399338 KRTAP1-4P0C5Y4 121 aa5.65□□□□□ -1.51
ITSN1-207ENST00000399338 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.51
ITSN1-207ENST00000399338 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
ITSN1-207ENST00000399338 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
ITSN1-207ENST00000399338 STAB1Q9NY15 2570 aa5.6□□□□□ -1.51
ITSN1-207ENST00000399338 C9orf92A6NGG3 77 aa5.54□□□□□ -1.52
ITSN1-207ENST00000399338 MGAM2Q2M2H8 2515 aa5.53□□□□□ -1.52
ITSN1-207ENST00000399338 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
ITSN1-207ENST00000399338 LRP1BQ9NZR2 4599 aa5.52□□□□□ -1.53
ITSN1-207ENST00000399338 DNAH5Q8TE73 4624 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms