RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 VPS25Q9BRG1 176 aa7.75□□□□□ -1.17
RAB1A-201ENST00000398529 A0A087WSZ3 146 aa7.74□□□□□ -1.17
RAB1A-201ENST00000398529 A0A1B0GV90 55 aa7.73□□□□□ -1.17
RAB1A-201ENST00000398529 F8W1H4 67 aa7.73□□□□□ -1.17
RAB1A-201ENST00000398529 PDE6GP18545 87 aa7.73□□□□□ -1.17
RAB1A-201ENST00000398529 SS18L2Q9UHA2 77 aa7.73□□□□□ -1.17
RAB1A-201ENST00000398529 C1orf195Q5TG92 126 aa7.72□□□□□ -1.17
RAB1A-201ENST00000398529 C21orf62-AS1Q17RA5 79 aa7.7□□□□□ -1.18
RAB1A-201ENST00000398529 A0A1B0GW54 56 aa7.67□□□□□ -1.18
RAB1A-201ENST00000398529 ETDBQ3ZM63 59 aa7.65□□□□□ -1.18
RAB1A-201ENST00000398529 Q96NJ1 140 aa7.65□□□□□ -1.18
RAB1A-201ENST00000398529 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
RAB1A-201ENST00000398529 LINC00472Q9H8W2 130 aa7.62□□□□□ -1.19
RAB1A-201ENST00000398529 KRTAP9-7A8MTY7 169 aa7.59□□□□□ -1.19
RAB1A-201ENST00000398529 IGKV4-1P06312 121 aa7.59□□□□□ -1.19
RAB1A-201ENST00000398529 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
RAB1A-201ENST00000398529 SIGMAR1Q99720 223 aa7.58□□□□□ -1.2
RAB1A-201ENST00000398529 NREPQ16612 68 aa7.56□□□□□ -1.2
RAB1A-201ENST00000398529 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.55□□□□□ -1.2
RAB1A-201ENST00000398529 J3KT08 172 aa7.54□□□□□ -1.2
RAB1A-201ENST00000398529 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
RAB1A-201ENST00000398529 ATP11AUNQ6ZP68 121 aa7.52□□□□□ -1.21
RAB1A-201ENST00000398529 Q6ZVQ6 151 aa7.51□□□□□ -1.21
RAB1A-201ENST00000398529 LINC00846Q9NV44 126 aa7.51□□□□□ -1.21
RAB1A-201ENST00000398529 A0A1B0GVX0 72 aa7.48□□□□□ -1.21
RAB1A-201ENST00000398529 UBL5Q9BZL1 73 aa7.48□□□□□ -1.21
RAB1A-201ENST00000398529 IGHV6-1A0A0B4J1U7 121 aa7.47□□□□□ -1.21
RAB1A-201ENST00000398529 NDUFB1O75438 58 aa7.47□□□□□ -1.21
RAB1A-201ENST00000398529 DSCR10P59022 87 aa7.47□□□□□ -1.21
RAB1A-201ENST00000398529 A8MWP4 228 aa7.46□□□□□ -1.22
RAB1A-201ENST00000398529 LINC00313P59037 77 aa7.46□□□□□ -1.22
RAB1A-201ENST00000398529 BPY2O14599 106 aa7.45□□□□□ -1.22
RAB1A-201ENST00000398529 ACYP1P07311 99 aa7.45□□□□□ -1.22
RAB1A-201ENST00000398529 IGKV3D-7A0A0C4DH55 119 aa7.44□□□□□ -1.22
RAB1A-201ENST00000398529 FAM240AA0A1B0GVK7 77 aa7.44□□□□□ -1.22
RAB1A-201ENST00000398529 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
RAB1A-201ENST00000398529 NOTCH2NLQ7Z3S9 236 aa7.44□□□□□ -1.22
RAB1A-201ENST00000398529 PRR15Q8IV56 129 aa7.42□□□□□ -1.22
RAB1A-201ENST00000398529 Q75L30 129 aa7.41□□□□□ -1.22
RAB1A-201ENST00000398529 KRTAP16-1A8MUX0 517 aa7.4□□□□□ -1.22
RAB1A-201ENST00000398529 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
RAB1A-201ENST00000398529 LOC100996750A0A140TA64 210 aa7.39□□□□□ -1.23
RAB1A-201ENST00000398529 K7EQZ3 153 aa7.39□□□□□ -1.23
RAB1A-201ENST00000398529 KRTAP4-6Q9BYQ5 205 aa7.39□□□□□ -1.23
RAB1A-201ENST00000398529 J3QR89 54 aa7.38□□□□□ -1.23
RAB1A-201ENST00000398529 C20orf166-AS1Q96NR2 134 aa7.38□□□□□ -1.23
RAB1A-201ENST00000398529 USH2AO75445 5202 aa7.38□□□□□ -1.23
RAB1A-201ENST00000398529 A8MUU9 505 aa7.37□□□□□ -1.23
RAB1A-201ENST00000398529 SSPOA2VEC9 5147 aa7.37□□□□□ -1.23
RAB1A-201ENST00000398529 Q8N9L7 120 aa7.36□□□□□ -1.23
RAB1A-201ENST00000398529 MMP24-AS1A0A0U1RRL7 71 aa7.35□□□□□ -1.23
RAB1A-201ENST00000398529 CXCL6P80162 114 aa7.35□□□□□ -1.23
RAB1A-201ENST00000398529 KRTAP9-8Q9BYQ0 159 aa7.35□□□□□ -1.23
RAB1A-201ENST00000398529 LCE2BO14633 110 aa7.34□□□□□ -1.23
RAB1A-201ENST00000398529 TMEM254Q8TBM7 123 aa7.31□□□□□ -1.24
RAB1A-201ENST00000398529 hDV103S1A0JD37 113 aa7.3□□□□□ -1.24
RAB1A-201ENST00000398529 ATP5EP2Q5VTU8 51 aa7.3□□□□□ -1.24
RAB1A-201ENST00000398529 LINC00643Q86TS7 51 aa7.3□□□□□ -1.24
RAB1A-201ENST00000398529 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
RAB1A-201ENST00000398529 WFDC13Q8IUB5 93 aa7.29□□□□□ -1.24
RAB1A-201ENST00000398529 Q8N9P0 234 aaPredicted RBP7.29□□□□□ -1.24
RAB1A-201ENST00000398529 MRPL34Q9BQ48 92 aaKnown RBP7.29□□□□□ -1.24
RAB1A-201ENST00000398529 FAM236DA0A1B0GTK5 79 aa7.28□□□□□ -1.24
RAB1A-201ENST00000398529 FAM236CP0DP71 79 aa7.28□□□□□ -1.24
RAB1A-201ENST00000398529 K7ERU9 68 aa7.27□□□□□ -1.25
RAB1A-201ENST00000398529 CASC2Q6XLA1 102 aa7.27□□□□□ -1.25
RAB1A-201ENST00000398529 HCG22E2RYF7 251 aa7.26□□□□□ -1.25
RAB1A-201ENST00000398529 KRTAP19-1Q8IUB9 90 aa7.25□□□□□ -1.25
RAB1A-201ENST00000398529 MT2AP02795 61 aa7.22□□□□□ -1.25
RAB1A-201ENST00000398529 NDUFS5O43920 106 aa7.21□□□□□ -1.26
RAB1A-201ENST00000398529 KRTAP10-10P60014 251 aa7.21□□□□□ -1.26
RAB1A-201ENST00000398529 HIST1H4AP62805 103 aaKnown RBP7.21□□□□□ -1.26
RAB1A-201ENST00000398529 ZCCHC13Q8WW36 166 aaKnown RBP7.21□□□□□ -1.26
RAB1A-201ENST00000398529 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.26
RAB1A-201ENST00000398529 SYNE2Q8WXH0 6885 aaKnown RBP7.19□□□□□ -1.26
RAB1A-201ENST00000398529 A0A087WVE0 104 aa7.15□□□□□ -1.26
RAB1A-201ENST00000398529 MT1FP04733 61 aa7.15□□□□□ -1.26
RAB1A-201ENST00000398529 MACF1Q9UPN3 7388 aaKnown RBP7.14□□□□□ -1.27
RAB1A-201ENST00000398529 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
RAB1A-201ENST00000398529 Q5W150 140 aa7.11□□□□□ -1.27
RAB1A-201ENST00000398529 MT-ATP8P03928 68 aa7.1□□□□□ -1.27
RAB1A-201ENST00000398529 TP53AIP1Q9HCN2 124 aa7.1□□□□□ -1.27
RAB1A-201ENST00000398529 SPINK7P58062 85 aa7.07□□□□□ -1.28
RAB1A-201ENST00000398529 IMUPQ9GZP8 106 aa7.07□□□□□ -1.28
RAB1A-201ENST00000398529 HRES1P13985 223 aa7.03□□□□□ -1.28
RAB1A-201ENST00000398529 MPLKIPQ8TAP9 179 aa7.03□□□□□ -1.28
RAB1A-201ENST00000398529 KRTAP19-6Q3LI70 58 aa7.02□□□□□ -1.29
RAB1A-201ENST00000398529 IGKV2D-30A0A075B6S6 120 aa7.01□□□□□ -1.29
RAB1A-201ENST00000398529 UQCRQO14949 82 aa7.01□□□□□ -1.29
RAB1A-201ENST00000398529 IGKV2-30P06310 120 aa7.01□□□□□ -1.29
RAB1A-201ENST00000398529 C7orf65Q6ZTY9 151 aa7.01□□□□□ -1.29
RAB1A-201ENST00000398529 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
RAB1A-201ENST00000398529 OCR1Q9BZK8 76 aa6.98□□□□□ -1.29
RAB1A-201ENST00000398529 SCGB1A1P11684 91 aa6.97□□□□□ -1.29
RAB1A-201ENST00000398529 KRTAP6-3Q3LI67 103 aa6.95□□□□□ -1.3
RAB1A-201ENST00000398529 FAM236AA0A1B0GUQ0 79 aa6.94□□□□□ -1.3
RAB1A-201ENST00000398529 FAM236BA0A1B0GV22 79 aa6.94□□□□□ -1.3
RAB1A-201ENST00000398529 H0Y9P7 68 aa6.94□□□□□ -1.3
RAB1A-201ENST00000398529 ATOX1O00244 68 aa6.92□□□□□ -1.3
RAB1A-201ENST00000398529 LOC101927531A0A1B0GV80 90 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms