RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 IGLV7-43P04211 117 aa6.69□□□□□ -1.34
CSGALNACT1-202ENST00000397998 SSBP3-AS1Q7Z2R9 100 aa6.68□□□□□ -1.34
CSGALNACT1-202ENST00000397998 WWC2-AS2Q96NR7 200 aa6.68□□□□□ -1.34
CSGALNACT1-202ENST00000397998 A0A087X002 238 aa6.68□□□□□ -1.34
CSGALNACT1-202ENST00000397998 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
CSGALNACT1-202ENST00000397998 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
CSGALNACT1-202ENST00000397998 Q6ZR54 194 aa6.65□□□□□ -1.34
CSGALNACT1-202ENST00000397998 Q96NJ1 140 aa6.65□□□□□ -1.34
CSGALNACT1-202ENST00000397998 PRAC1Q96KF2 57 aa6.64□□□□□ -1.35
CSGALNACT1-202ENST00000397998 TRRAPQ9Y4A5 3859 aa6.62□□□□□ -1.35
CSGALNACT1-202ENST00000397998 ZNF469Q96JG9 3925 aaPredicted RBP6.62□□□□□ -1.35
CSGALNACT1-202ENST00000397998 K7ERS5 55 aa6.62□□□□□ -1.35
CSGALNACT1-202ENST00000397998 Q5W150 140 aa6.62□□□□□ -1.35
CSGALNACT1-202ENST00000397998 TYMSOSQ8TAI1 123 aa6.61□□□□□ -1.35
CSGALNACT1-202ENST00000397998 PLA2G1BP04054 148 aaKnown RBP6.59□□□□□ -1.35
CSGALNACT1-202ENST00000397998 LINC00483Q53H64 154 aa6.59□□□□□ -1.36
CSGALNACT1-202ENST00000397998 Q8N1X5 172 aa6.59□□□□□ -1.36
CSGALNACT1-202ENST00000397998 PLAC8Q9NZF1 115 aa6.58□□□□□ -1.36
CSGALNACT1-202ENST00000397998 SRRM2Q9UQ35 2752 aaKnown RBP6.58□□□□□ -1.36
CSGALNACT1-202ENST00000397998 KRTAP13-1Q8IUC0 172 aa6.57□□□□□ -1.36
CSGALNACT1-202ENST00000397998 A6NN06 94 aa6.56□□□□□ -1.36
CSGALNACT1-202ENST00000397998 TENM2Q9NT68 2774 aa6.55□□□□□ -1.36
CSGALNACT1-202ENST00000397998 ANK3Q12955 4377 aaKnown RBP6.53□□□□□ -1.36
CSGALNACT1-202ENST00000397998 Q6ZRN7 208 aaPredicted RBP6.52□□□□□ -1.37
CSGALNACT1-202ENST00000397998 DMAC1Q96GE9 116 aa6.51□□□□□ -1.37
CSGALNACT1-202ENST00000397998 C9orf92A6NGG3 77 aa6.49□□□□□ -1.37
CSGALNACT1-202ENST00000397998 LINC01554Q52M75 96 aa6.46□□□□□ -1.37
CSGALNACT1-202ENST00000397998 AKAP9Q99996 3911 aa6.46□□□□□ -1.37
CSGALNACT1-202ENST00000397998 ADM2Q7Z4H4 148 aa6.45□□□□□ -1.38
CSGALNACT1-202ENST00000397998 LINC00304Q8N9R0 145 aa6.45□□□□□ -1.38
CSGALNACT1-202ENST00000397998 DMBT1Q9UGM3 2413 aaPredicted RBP6.44□□□□□ -1.38
CSGALNACT1-202ENST00000397998 ASB16-AS1Q495Z4 193 aa6.43□□□□□ -1.38
CSGALNACT1-202ENST00000397998 SMR3BP02814 79 aaPredicted RBP6.42□□□□□ -1.38
CSGALNACT1-202ENST00000397998 CSAG1Q6PB30 78 aa6.42□□□□□ -1.38
CSGALNACT1-202ENST00000397998 KRTAP10-2P60368 255 aa6.41□□□□□ -1.38
CSGALNACT1-202ENST00000397998 TGP01266 2768 aa6.41□□□□□ -1.38
CSGALNACT1-202ENST00000397998 FLG2Q5D862 2391 aaPredicted RBP6.38□□□□□ -1.39
CSGALNACT1-202ENST00000397998 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
CSGALNACT1-202ENST00000397998 A0A1B0GU33 70 aa6.35□□□□□ -1.39
CSGALNACT1-202ENST00000397998 KRTAP10-1P60331 282 aa6.35□□□□□ -1.39
CSGALNACT1-202ENST00000397998 COL7A1Q02388 2944 aa6.34□□□□□ -1.39
CSGALNACT1-202ENST00000397998 KRTAP13-2Q52LG2 175 aa6.33□□□□□ -1.4
CSGALNACT1-202ENST00000397998 CRIPTQ9P021 101 aa6.3□□□□□ -1.4
CSGALNACT1-202ENST00000397998 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
CSGALNACT1-202ENST00000397998 A0A0D9SG42 100 aa6.29□□□□□ -1.4
CSGALNACT1-202ENST00000397998 FBN3Q75N90 2809 aa6.26□□□□□ -1.41
CSGALNACT1-202ENST00000397998 H3BS24 57 aa6.26□□□□□ -1.41
CSGALNACT1-202ENST00000397998 SPINT4Q6UDR6 99 aa6.25□□□□□ -1.41
CSGALNACT1-202ENST00000397998 KRTAP13-3Q3SY46 172 aa6.23□□□□□ -1.41
CSGALNACT1-202ENST00000397998 H1FX-AS1Q4G0G2 97 aa6.18□□□□□ -1.42
CSGALNACT1-202ENST00000397998 KRTAP16-1A8MUX0 517 aa6.15□□□□□ -1.43
CSGALNACT1-202ENST00000397998 MEGF8Q7Z7M0 2845 aa6.13□□□□□ -1.43
CSGALNACT1-202ENST00000397998 KRTAP1-4P0C5Y4 121 aa6.13□□□□□ -1.43
CSGALNACT1-202ENST00000397998 Q6ZSA8 131 aa6.11□□□□□ -1.43
CSGALNACT1-202ENST00000397998 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
CSGALNACT1-202ENST00000397998 COX6B2Q6YFQ2 88 aa6.08□□□□□ -1.44
CSGALNACT1-202ENST00000397998 RPL37P61927 97 aaKnown RBP6.07□□□□□ -1.44
CSGALNACT1-202ENST00000397998 H0YAA0 97 aa6.06□□□□□ -1.44
CSGALNACT1-202ENST00000397998 ROMO1P60602 79 aa6.04□□□□□ -1.44
CSGALNACT1-202ENST00000397998 HUWE1Q7Z6Z7 4374 aaKnown RBP6.03□□□□□ -1.44
CSGALNACT1-202ENST00000397998 A8MUU9 505 aa6.01□□□□□ -1.45
CSGALNACT1-202ENST00000397998 S4R3F8 94 aa6.01□□□□□ -1.45
CSGALNACT1-202ENST00000397998 DNAH10Q8IVF4 4471 aa6.01□□□□□ -1.45
CSGALNACT1-202ENST00000397998 RPS29P62273 56 aaKnown RBP6□□□□□ -1.45
CSGALNACT1-202ENST00000397998 C20orf166-AS1Q96NR2 134 aa5.98□□□□□ -1.45
CSGALNACT1-202ENST00000397998 ANK2Q01484 3957 aa5.85□□□□□ -1.47
CSGALNACT1-202ENST00000397998 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
CSGALNACT1-202ENST00000397998 Q5VSD8 79 aa5.84□□□□□ -1.47
CSGALNACT1-202ENST00000397998 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
CSGALNACT1-202ENST00000397998 PLECQ15149 4684 aaKnown RBP5.82□□□□□ -1.48
CSGALNACT1-202ENST00000397998 R4GN34 69 aa5.78□□□□□ -1.48
CSGALNACT1-202ENST00000397998 DNAH9Q9NYC9 4486 aa5.78□□□□□ -1.48
CSGALNACT1-202ENST00000397998 NDUFAF8A1L188 74 aa5.77□□□□□ -1.49
CSGALNACT1-202ENST00000397998 M0QZ58 72 aa5.76□□□□□ -1.49
CSGALNACT1-202ENST00000397998 P0C880 135 aa5.75□□□□□ -1.49
CSGALNACT1-202ENST00000397998 DNAH1Q9P2D7 4330 aa5.73□□□□□ -1.49
CSGALNACT1-202ENST00000397998 LYSTQ99698 3801 aa5.73□□□□□ -1.49
CSGALNACT1-202ENST00000397998 XP32Q5T750 250 aa5.7□□□□□ -1.5
CSGALNACT1-202ENST00000397998 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
CSGALNACT1-202ENST00000397998 DNAH8Q96JB1 4490 aa5.68□□□□□ -1.5
CSGALNACT1-202ENST00000397998 DNAH11Q96DT5 4516 aa5.68□□□□□ -1.5
CSGALNACT1-202ENST00000397998 J3QL48 77 aa5.65□□□□□ -1.5
CSGALNACT1-202ENST00000397998 LUZP6Q538Z0 58 aa5.65□□□□□ -1.5
CSGALNACT1-202ENST00000397998 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.51
CSGALNACT1-202ENST00000397998 STARD9Q9P2P6 4700 aa5.64□□□□□ -1.51
CSGALNACT1-202ENST00000397998 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
CSGALNACT1-202ENST00000397998 KRTAP10-6P60371 365 aaPredicted RBP5.62□□□□□ -1.51
CSGALNACT1-202ENST00000397998 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
CSGALNACT1-202ENST00000397998 FRAS1Q86XX4 4008 aa5.6□□□□□ -1.51
CSGALNACT1-202ENST00000397998 VPS13DQ5THJ4 4388 aa5.6□□□□□ -1.51
CSGALNACT1-202ENST00000397998 KRTAP12-2P59991 146 aa5.59□□□□□ -1.51
CSGALNACT1-202ENST00000397998 DNAH17Q9UFH2 4485 aa5.58□□□□□ -1.52
CSGALNACT1-202ENST00000397998 KMT2AQ03164 3969 aa5.57□□□□□ -1.52
CSGALNACT1-202ENST00000397998 DNAH3Q8TD57 4116 aa5.56□□□□□ -1.52
CSGALNACT1-202ENST00000397998 DNAH7Q8WXX0 4024 aa5.56□□□□□ -1.52
CSGALNACT1-202ENST00000397998 A0A1B0GVY2 172 aa5.56□□□□□ -1.52
CSGALNACT1-202ENST00000397998 LRP1BQ9NZR2 4599 aa5.56□□□□□ -1.52
CSGALNACT1-202ENST00000397998 CMYA5Q8N3K9 4069 aa5.55□□□□□ -1.52
CSGALNACT1-202ENST00000397998 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
CSGALNACT1-202ENST00000397998 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms