RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 FXYD2P54710 66 aa4.89□□□□□ -1.63
NEDD9-203ENST00000397378 TSPEAR-AS2P59090 65 aa4.89□□□□□ -1.63
NEDD9-203ENST00000397378 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
NEDD9-203ENST00000397378 DSCR8Q96T75 97 aa4.89□□□□□ -1.63
NEDD9-203ENST00000397378 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
NEDD9-203ENST00000397378 hADV29S1A0JD25 119 aa4.88□□□□□ -1.63
NEDD9-203ENST00000397378 MT2AP02795 61 aa4.88□□□□□ -1.63
NEDD9-203ENST00000397378 LGALS3P17931 250 aaKnown RBP4.88□□□□□ -1.63
NEDD9-203ENST00000397378 KRTAP19-6Q3LI70 58 aa4.88□□□□□ -1.63
NEDD9-203ENST00000397378 PCP2Q8IVA1 136 aa4.88□□□□□ -1.63
NEDD9-203ENST00000397378 NHP2Q9NX24 153 aaKnown RBP4.88□□□□□ -1.63
NEDD9-203ENST00000397378 DHRS4-AS1Q9P1J3 65 aa4.88□□□□□ -1.63
NEDD9-203ENST00000397378 NEBP20929 6669 aa4.88□□□□□ -1.63
NEDD9-203ENST00000397378 LEPROTO15243 131 aa4.87□□□□□ -1.63
NEDD9-203ENST00000397378 SMIM29Q86T20 159 aa4.87□□□□□ -1.63
NEDD9-203ENST00000397378 Q1RN00 199 aa4.86□□□□□ -1.63
NEDD9-203ENST00000397378 SOSTDC1Q6X4U4 206 aa4.86□□□□□ -1.63
NEDD9-203ENST00000397378 NDUFC1O43677 76 aa4.85□□□□□ -1.63
NEDD9-203ENST00000397378 KRTAP9-3Q9BYQ3 159 aa4.85□□□□□ -1.63
NEDD9-203ENST00000397378 TEX49A0A1B0GTD5 131 aa4.84□□□□□ -1.63
NEDD9-203ENST00000397378 C8orf87E5RJ46 101 aa4.84□□□□□ -1.63
NEDD9-203ENST00000397378 MT1FP04733 61 aa4.84□□□□□ -1.63
NEDD9-203ENST00000397378 HERVK_113P61574 105 aa4.84□□□□□ -1.63
NEDD9-203ENST00000397378 PSMB2P49721 201 aa4.83□□□□□ -1.64
NEDD9-203ENST00000397378 ELOF1P60002 83 aaKnown RBP4.83□□□□□ -1.64
NEDD9-203ENST00000397378 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
NEDD9-203ENST00000397378 ADAMTSL4-AS1Q5T5F5 129 aa4.82□□□□□ -1.64
NEDD9-203ENST00000397378 ATP11AUNQ6ZP68 121 aa4.82□□□□□ -1.64
NEDD9-203ENST00000397378 Q75L30 129 aa4.82□□□□□ -1.64
NEDD9-203ENST00000397378 PLNP26678 52 aa4.81□□□□□ -1.64
NEDD9-203ENST00000397378 DEFB105AQ8NG35 78 aa4.81□□□□□ -1.64
NEDD9-203ENST00000397378 A0A0G2JQZ4 141 aa4.8□□□□□ -1.64
NEDD9-203ENST00000397378 A0A0J9YXY3 114 aa4.8□□□□□ -1.64
NEDD9-203ENST00000397378 K7ERJ3 54 aa4.8□□□□□ -1.64
NEDD9-203ENST00000397378 COX7BP24311 80 aa4.8□□□□□ -1.64
NEDD9-203ENST00000397378 IGLV5-48A0A075B6I7 105 aa4.79□□□□□ -1.64
NEDD9-203ENST00000397378 A0A0B4J2C4 111 aa4.79□□□□□ -1.64
NEDD9-203ENST00000397378 ATXN8Q156A1 80 aa4.79□□□□□ -1.64
NEDD9-203ENST00000397378 C6orf99Q4VX62 202 aa4.79□□□□□ -1.64
NEDD9-203ENST00000397378 TIMM17BO60830 172 aa4.78□□□□□ -1.64
NEDD9-203ENST00000397378 LCA10Q71F78 164 aa4.78□□□□□ -1.64
NEDD9-203ENST00000397378 LINC00308Q8TCZ7 52 aa4.78□□□□□ -1.64
NEDD9-203ENST00000397378 HIST1H4GQ99525 98 aa4.78□□□□□ -1.64
NEDD9-203ENST00000397378 CCKP06307 115 aa4.77□□□□□ -1.65
NEDD9-203ENST00000397378 Q6ZVQ6 151 aa4.77□□□□□ -1.65
NEDD9-203ENST00000397378 A0A0A0MQY5 61 aa4.76□□□□□ -1.65
NEDD9-203ENST00000397378 GHRHP01286 108 aa4.76□□□□□ -1.65
NEDD9-203ENST00000397378 OBSCN-AS1Q96MR7 158 aa4.76□□□□□ -1.65
NEDD9-203ENST00000397378 LITAFQ99732 161 aa4.76□□□□□ -1.65
NEDD9-203ENST00000397378 MUC12Q9UKN1 5478 aa4.76□□□□□ -1.65
NEDD9-203ENST00000397378 KLKP1Q107X0 134 aa4.75□□□□□ -1.65
NEDD9-203ENST00000397378 CXCL6P80162 114 aa4.74□□□□□ -1.65
NEDD9-203ENST00000397378 Q6JHZ5 121 aa4.73□□□□□ -1.65
NEDD9-203ENST00000397378 TRAV13-2A0A0B4J235 113 aa4.72□□□□□ -1.65
NEDD9-203ENST00000397378 H7BZZ5 65 aa4.72□□□□□ -1.65
NEDD9-203ENST00000397378 TMEM256-PLSCR3K7ERE1 68 aa4.72□□□□□ -1.65
NEDD9-203ENST00000397378 Q1T7F1 81 aa4.72□□□□□ -1.65
NEDD9-203ENST00000397378 A8MUN3 132 aa4.71□□□□□ -1.66
NEDD9-203ENST00000397378 LST1O00453 97 aa4.71□□□□□ -1.66
NEDD9-203ENST00000397378 ATP5EP2Q5VTU8 51 aa4.71□□□□□ -1.66
NEDD9-203ENST00000397378 NOTCH2NLQ7Z3S9 236 aa4.71□□□□□ -1.66
NEDD9-203ENST00000397378 C20orf166-AS1Q96NR2 134 aa4.71□□□□□ -1.66
NEDD9-203ENST00000397378 CYSTM1Q9H1C7 97 aa4.71□□□□□ -1.66
NEDD9-203ENST00000397378 PRO1854Q9UHT4 67 aa4.71□□□□□ -1.66
NEDD9-203ENST00000397378 F8WEM9 126 aa4.7□□□□□ -1.66
NEDD9-203ENST00000397378 RBM3P98179 157 aaKnown RBP4.7□□□□□ -1.66
NEDD9-203ENST00000397378 Q96NJ1 140 aa4.7□□□□□ -1.66
NEDD9-203ENST00000397378 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
NEDD9-203ENST00000397378 A8MUU9 505 aa4.69□□□□□ -1.66
NEDD9-203ENST00000397378 COX6CP09669 75 aa4.69□□□□□ -1.66
NEDD9-203ENST00000397378 MP68P56378 58 aa4.69□□□□□ -1.66
NEDD9-203ENST00000397378 C7orf65Q6ZTY9 151 aa4.69□□□□□ -1.66
NEDD9-203ENST00000397378 TRAV7A0A075B6U4 112 aa4.68□□□□□ -1.66
NEDD9-203ENST00000397378 IGFL1Q6UW32 110 aa4.68□□□□□ -1.66
NEDD9-203ENST00000397378 CLEC2BQ92478 149 aa4.68□□□□□ -1.66
NEDD9-203ENST00000397378 ZNF815PA8K554 130 aa4.67□□□□□ -1.66
NEDD9-203ENST00000397378 KRTAP2-3P0C7H8 128 aa4.65□□□□□ -1.67
NEDD9-203ENST00000397378 KRTAP2-4Q9BYR9 128 aa4.65□□□□□ -1.67
NEDD9-203ENST00000397378 PSPHP1O15172 72 aa4.64□□□□□ -1.67
NEDD9-203ENST00000397378 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
NEDD9-203ENST00000397378 SMIM11BQ8TCY0 68 aa4.63□□□□□ -1.67
NEDD9-203ENST00000397378 TTTY13Q9BZ97 58 aa4.63□□□□□ -1.67
NEDD9-203ENST00000397378 TRIAP1O43715 76 aa4.62□□□□□ -1.67
NEDD9-203ENST00000397378 LINC00313P59037 77 aa4.62□□□□□ -1.67
NEDD9-203ENST00000397378 C20orf197Q8N268 126 aa4.62□□□□□ -1.67
NEDD9-203ENST00000397378 KRTAP16-1A8MUX0 517 aa4.61□□□□□ -1.67
NEDD9-203ENST00000397378 LINC00575Q6W349 94 aa4.61□□□□□ -1.67
NEDD9-203ENST00000397378 Q6ZQY7 126 aa4.61□□□□□ -1.67
NEDD9-203ENST00000397378 A0A1B0GW54 56 aa4.6□□□□□ -1.67
NEDD9-203ENST00000397378 A6NN06 94 aa4.6□□□□□ -1.67
NEDD9-203ENST00000397378 HRES1P13985 223 aa4.6□□□□□ -1.67
NEDD9-203ENST00000397378 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
NEDD9-203ENST00000397378 CYP4F30PQ9H0H9 118 aa4.6□□□□□ -1.67
NEDD9-203ENST00000397378 MUSTN1Q8IVN3 82 aa4.58□□□□□ -1.68
NEDD9-203ENST00000397378 IGHV6-1A0A0B4J1U7 121 aa4.57□□□□□ -1.68
NEDD9-203ENST00000397378 DSCR10P59022 87 aa4.56□□□□□ -1.68
NEDD9-203ENST00000397378 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.56□□□□□ -1.68
NEDD9-203ENST00000397378 KMT2DO14686 5537 aa4.55□□□□□ -1.68
NEDD9-203ENST00000397378 Q8N9P0 234 aaPredicted RBP4.55□□□□□ -1.68
NEDD9-203ENST00000397378 KRTAP5-9P26371 169 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms