RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.49□□□□□ -1.69
CAPN3-208ENST00000397204 LINC00575Q6W349 94 aa4.49□□□□□ -1.69
CAPN3-208ENST00000397204 CLEC2BQ92478 149 aa4.49□□□□□ -1.69
CAPN3-208ENST00000397204 HIST1H2BHQ93079 126 aa4.49□□□□□ -1.69
CAPN3-208ENST00000397204 HIST1H2BNQ99877 126 aa4.49□□□□□ -1.69
CAPN3-208ENST00000397204 HIST1H2BMQ99879 126 aa4.49□□□□□ -1.69
CAPN3-208ENST00000397204 C3orf79P0CE67 100 aa4.48□□□□□ -1.69
CAPN3-208ENST00000397204 IGFL1Q6UW32 110 aa4.48□□□□□ -1.69
CAPN3-208ENST00000397204 Q96NJ1 140 aa4.48□□□□□ -1.69
CAPN3-208ENST00000397204 TRBV20-1A0A075B6N2 111 aa4.47□□□□□ -1.69
CAPN3-208ENST00000397204 hADV29S1A0JD25 119 aa4.47□□□□□ -1.69
CAPN3-208ENST00000397204 LST1O00453 97 aa4.47□□□□□ -1.69
CAPN3-208ENST00000397204 TAX1BP3O14907 124 aa4.47□□□□□ -1.69
CAPN3-208ENST00000397204 NDUFV3P56181 108 aaKnown RBP4.47□□□□□ -1.69
CAPN3-208ENST00000397204 FCGBPQ9Y6R7 5405 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-208ENST00000397204 Q6ZQY7 126 aa4.46□□□□□ -1.7
CAPN3-208ENST00000397204 K7EP34 96 aa4.45□□□□□ -1.7
CAPN3-208ENST00000397204 KRTDAPP60985 99 aa4.45□□□□□ -1.7
CAPN3-208ENST00000397204 PPDPFLQ8WWR9 84 aa4.45□□□□□ -1.7
CAPN3-208ENST00000397204 C20orf166-AS1Q96NR2 134 aa4.45□□□□□ -1.7
CAPN3-208ENST00000397204 A8MUU9 505 aa4.44□□□□□ -1.7
CAPN3-208ENST00000397204 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.44□□□□□ -1.7
CAPN3-208ENST00000397204 PAM16Q9Y3D7 125 aa4.44□□□□□ -1.7
CAPN3-208ENST00000397204 LYRM7Q5U5X0 104 aa4.42□□□□□ -1.7
CAPN3-208ENST00000397204 MT2AP02795 61 aa4.41□□□□□ -1.7
CAPN3-208ENST00000397204 ANKRD29Q8N6D5 301 aa4.41□□□□□ -1.7
CAPN3-208ENST00000397204 MT-ATP8P03928 68 aa4.4□□□□□ -1.71
CAPN3-208ENST00000397204 BVES-AS1Q5T3Y7 98 aa4.4□□□□□ -1.71
CAPN3-208ENST00000397204 ATOH7Q8N100 152 aa4.4□□□□□ -1.71
CAPN3-208ENST00000397204 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
CAPN3-208ENST00000397204 FAM236AA0A1B0GUQ0 79 aa4.39□□□□□ -1.71
CAPN3-208ENST00000397204 FAM236BA0A1B0GV22 79 aa4.39□□□□□ -1.71
CAPN3-208ENST00000397204 C8orf87E5RJ46 101 aa4.39□□□□□ -1.71
CAPN3-208ENST00000397204 H3BUT2 72 aa4.39□□□□□ -1.71
CAPN3-208ENST00000397204 TEN1Q86WV5 123 aa4.39□□□□□ -1.71
CAPN3-208ENST00000397204 SNCGO76070 127 aa4.38□□□□□ -1.71
CAPN3-208ENST00000397204 TMEM258P61165 79 aa4.38□□□□□ -1.71
CAPN3-208ENST00000397204 F8W1H4 67 aa4.37□□□□□ -1.71
CAPN3-208ENST00000397204 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
CAPN3-208ENST00000397204 RBM12B-AS1Q9P1G2 102 aa4.37□□□□□ -1.71
CAPN3-208ENST00000397204 MT1FP04733 61 aa4.36□□□□□ -1.71
CAPN3-208ENST00000397204 PRR15Q8IV56 129 aa4.36□□□□□ -1.71
CAPN3-208ENST00000397204 A0A087WSZ3 146 aa4.35□□□□□ -1.71
CAPN3-208ENST00000397204 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
CAPN3-208ENST00000397204 UQCRQO14949 82 aa4.35□□□□□ -1.71
CAPN3-208ENST00000397204 DSCR10P59022 87 aa4.35□□□□□ -1.71
CAPN3-208ENST00000397204 LINC00313P59037 77 aa4.35□□□□□ -1.71
CAPN3-208ENST00000397204 LINC00846Q9NV44 126 aa4.35□□□□□ -1.71
CAPN3-208ENST00000397204 H0YGX0 51 aa4.34□□□□□ -1.71
CAPN3-208ENST00000397204 SPATA45Q537H7 98 aa4.34□□□□□ -1.71
CAPN3-208ENST00000397204 H3BMG7 143 aa4.32□□□□□ -1.72
CAPN3-208ENST00000397204 HRES1P13985 223 aa4.32□□□□□ -1.72
CAPN3-208ENST00000397204 RAB37Q96AX2 223 aa4.32□□□□□ -1.72
CAPN3-208ENST00000397204 HIST1H4GQ99525 98 aa4.32□□□□□ -1.72
CAPN3-208ENST00000397204 SPCS1Q9Y6A9 102 aa4.32□□□□□ -1.72
CAPN3-208ENST00000397204 NOTCH2NLQ7Z3S9 236 aa4.31□□□□□ -1.72
CAPN3-208ENST00000397204 Q6ZVQ6 151 aa4.3□□□□□ -1.72
CAPN3-208ENST00000397204 BRK1Q8WUW1 75 aa4.3□□□□□ -1.72
CAPN3-208ENST00000397204 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
CAPN3-208ENST00000397204 A0A1W2PNM2 257 aa4.29□□□□□ -1.72
CAPN3-208ENST00000397204 A0A1W2PPM0 123 aa4.29□□□□□ -1.72
CAPN3-208ENST00000397204 IGKV4-1P06312 121 aa4.29□□□□□ -1.72
CAPN3-208ENST00000397204 FABP2P12104 132 aa4.29□□□□□ -1.72
CAPN3-208ENST00000397204 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
CAPN3-208ENST00000397204 IMUPQ9GZP8 106 aa4.29□□□□□ -1.72
CAPN3-208ENST00000397204 TRACP01848 142 aa4.28□□□□□ -1.72
CAPN3-208ENST00000397204 FAM218AQ96MZ4 157 aa4.28□□□□□ -1.72
CAPN3-208ENST00000397204 SMIM26A0A096LP01 95 aa4.27□□□□□ -1.73
CAPN3-208ENST00000397204 TRBV7-4A0A0J9YYF1 115 aa4.27□□□□□ -1.73
CAPN3-208ENST00000397204 NDUFS5O43920 106 aa4.27□□□□□ -1.73
CAPN3-208ENST00000397204 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
CAPN3-208ENST00000397204 LINC00472Q9H8W2 130 aa4.26□□□□□ -1.73
CAPN3-208ENST00000397204 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
CAPN3-208ENST00000397204 A0A0B4J2C4 111 aa4.25□□□□□ -1.73
CAPN3-208ENST00000397204 COX8AP10176 69 aa4.25□□□□□ -1.73
CAPN3-208ENST00000397204 SERP1Q9Y6X1 66 aa4.25□□□□□ -1.73
CAPN3-208ENST00000397204 IGHV6-1A0A0B4J1U7 121 aa4.24□□□□□ -1.73
CAPN3-208ENST00000397204 H3BQ85 93 aa4.24□□□□□ -1.73
CAPN3-208ENST00000397204 COX7CP15954 63 aa4.24□□□□□ -1.73
CAPN3-208ENST00000397204 H3BT86 120 aa4.23□□□□□ -1.73
CAPN3-208ENST00000397204 DEFB116Q30KQ4 102 aa4.23□□□□□ -1.73
CAPN3-208ENST00000397204 ETDBQ3ZM63 59 aa4.23□□□□□ -1.73
CAPN3-208ENST00000397204 HIGD1BQ9P298 99 aa4.23□□□□□ -1.73
CAPN3-208ENST00000397204 PRO1854Q9UHT4 67 aa4.23□□□□□ -1.73
CAPN3-208ENST00000397204 A8MWP4 228 aa4.22□□□□□ -1.73
CAPN3-208ENST00000397204 SPINK7P58062 85 aa4.22□□□□□ -1.73
CAPN3-208ENST00000397204 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
CAPN3-208ENST00000397204 PSMB2P49721 201 aa4.21□□□□□ -1.74
CAPN3-208ENST00000397204 ZCCHC13Q8WW36 166 aaKnown RBP4.21□□□□□ -1.74
CAPN3-208ENST00000397204 PRO0461Q9UI25 63 aa4.21□□□□□ -1.74
CAPN3-208ENST00000397204 TMEM256-PLSCR3K7ERE1 68 aa4.2□□□□□ -1.74
CAPN3-208ENST00000397204 CCKP06307 115 aa4.2□□□□□ -1.74
CAPN3-208ENST00000397204 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-208ENST00000397204 DSCR8Q96T75 97 aa4.2□□□□□ -1.74
CAPN3-208ENST00000397204 ORMDL1Q9P0S3 153 aa4.2□□□□□ -1.74
CAPN3-208ENST00000397204 A0A1B0GVX0 72 aa4.19□□□□□ -1.74
CAPN3-208ENST00000397204 A8MUN3 132 aa4.19□□□□□ -1.74
CAPN3-208ENST00000397204 DNAL4O96015 105 aa4.19□□□□□ -1.74
CAPN3-208ENST00000397204 MP68P56378 58 aa4.19□□□□□ -1.74
CAPN3-208ENST00000397204 LCA10Q71F78 164 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms