RNA–Protein interactions for RNA: ENST00000397171.6

SCMH1-208, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 5 BASIC

Gene SCMH1, Length 3,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-208ENST00000397171 LINC01554Q52M75 96 aa5.94□□□□□ -1.46
SCMH1-208ENST00000397171 CHTF8P0CG12 524 aa5.93□□□□□ -1.46
SCMH1-208ENST00000397171 IGHV6-1A0A0B4J1U7 121 aa5.92□□□□□ -1.46
SCMH1-208ENST00000397171 PLECQ15149 4684 aaKnown RBP5.92□□□□□ -1.46
SCMH1-208ENST00000397171 MRPL34Q9BQ48 92 aaKnown RBP5.92□□□□□ -1.46
SCMH1-208ENST00000397171 A0A1B0GVX0 72 aa5.91□□□□□ -1.46
SCMH1-208ENST00000397171 RTL8CO15255 209 aa5.89□□□□□ -1.47
SCMH1-208ENST00000397171 A0A087X002 238 aa5.89□□□□□ -1.47
SCMH1-208ENST00000397171 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
SCMH1-208ENST00000397171 IGLV9-49A0A0B4J1Y8 123 aa5.88□□□□□ -1.47
SCMH1-208ENST00000397171 APLNQ9ULZ1 77 aa5.88□□□□□ -1.47
SCMH1-208ENST00000397171 ACYP2P14621 99 aa5.87□□□□□ -1.47
SCMH1-208ENST00000397171 Q5W150 140 aa5.87□□□□□ -1.47
SCMH1-208ENST00000397171 SPATA8Q6RVD6 105 aa5.86□□□□□ -1.47
SCMH1-208ENST00000397171 KRTAP13-3Q3SY46 172 aa5.85□□□□□ -1.47
SCMH1-208ENST00000397171 KRTAP13-1Q8IUC0 172 aa5.85□□□□□ -1.47
SCMH1-208ENST00000397171 CDK2AP2O75956 126 aa5.85□□□□□ -1.47
SCMH1-208ENST00000397171 STARD9Q9P2P6 4700 aa5.84□□□□□ -1.47
SCMH1-208ENST00000397171 A0A1B0GU69 56 aa5.84□□□□□ -1.47
SCMH1-208ENST00000397171 PANO1I0J062 215 aa5.83□□□□□ -1.48
SCMH1-208ENST00000397171 KMT2AQ03164 3969 aa5.82□□□□□ -1.48
SCMH1-208ENST00000397171 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
SCMH1-208ENST00000397171 MIR22HGQ0VDD5 57 aa5.81□□□□□ -1.48
SCMH1-208ENST00000397171 NBDYA0A0U1RRE5 68 aa5.8□□□□□ -1.48
SCMH1-208ENST00000397171 CSAG1Q6PB30 78 aa5.79□□□□□ -1.48
SCMH1-208ENST00000397171 LINC00483Q53H64 154 aa5.79□□□□□ -1.48
SCMH1-208ENST00000397171 UQCR11O14957 56 aa5.77□□□□□ -1.49
SCMH1-208ENST00000397171 WWC2-AS2Q96NR7 200 aa5.77□□□□□ -1.49
SCMH1-208ENST00000397171 DYNC2H1Q8NCM8 4307 aaKnown RBP5.76□□□□□ -1.49
SCMH1-208ENST00000397171 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.76□□□□□ -1.49
SCMH1-208ENST00000397171 C14orf177Q52M58 125 aa5.75□□□□□ -1.49
SCMH1-208ENST00000397171 RETNLBQ9BQ08 111 aa5.75□□□□□ -1.49
SCMH1-208ENST00000397171 SPINK6Q6UWN8 80 aa5.75□□□□□ -1.49
SCMH1-208ENST00000397171 Q6ZRN7 208 aaPredicted RBP5.75□□□□□ -1.49
SCMH1-208ENST00000397171 NUPR2A6NF83 97 aa5.74□□□□□ -1.49
SCMH1-208ENST00000397171 FRAS1Q86XX4 4008 aa5.74□□□□□ -1.49
SCMH1-208ENST00000397171 ANAPC11Q9NYG5 84 aa5.73□□□□□ -1.49
SCMH1-208ENST00000397171 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
SCMH1-208ENST00000397171 DNAH2Q9P225 4427 aa5.73□□□□□ -1.49
SCMH1-208ENST00000397171 DNAH8Q96JB1 4490 aa5.72□□□□□ -1.49
SCMH1-208ENST00000397171 ZNF861PO60384 105 aa5.71□□□□□ -1.5
SCMH1-208ENST00000397171 ZNF706Q9Y5V0 76 aaPredicted RBP5.71□□□□□ -1.5
SCMH1-208ENST00000397171 HECTD4Q9Y4D8 3996 aa5.7□□□□□ -1.5
SCMH1-208ENST00000397171 A0A087WTM6 91 aa5.69□□□□□ -1.5
SCMH1-208ENST00000397171 IGKV2-30P06310 120 aa5.69□□□□□ -1.5
SCMH1-208ENST00000397171 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
SCMH1-208ENST00000397171 SPACA4Q8TDM5 124 aa5.67□□□□□ -1.5
SCMH1-208ENST00000397171 DNAH6Q9C0G6 4158 aa5.66□□□□□ -1.5
SCMH1-208ENST00000397171 LY6G6CO95867 125 aa5.66□□□□□ -1.5
SCMH1-208ENST00000397171 IGLV7-43P04211 117 aa5.65□□□□□ -1.51
SCMH1-208ENST00000397171 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.51
SCMH1-208ENST00000397171 DNAH17Q9UFH2 4485 aa5.64□□□□□ -1.51
SCMH1-208ENST00000397171 KMT2CQ8NEZ4 4911 aaKnown RBP5.64□□□□□ -1.51
SCMH1-208ENST00000397171 C1orf134Q5TEV5 83 aa5.63□□□□□ -1.51
SCMH1-208ENST00000397171 IGLV5-52A0A0A0MRZ9 124 aa5.63□□□□□ -1.51
SCMH1-208ENST00000397171 CIRBP-AS1Q8TBR5 109 aa5.62□□□□□ -1.51
SCMH1-208ENST00000397171 DNAH11Q96DT5 4516 aa5.61□□□□□ -1.51
SCMH1-208ENST00000397171 IGKV2D-30A0A075B6S6 120 aa5.58□□□□□ -1.52
SCMH1-208ENST00000397171 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
SCMH1-208ENST00000397171 A8MUU9 505 aa5.57□□□□□ -1.52
SCMH1-208ENST00000397171 KRTAP10-2P60368 255 aa5.57□□□□□ -1.52
SCMH1-208ENST00000397171 KRTAP16-1A8MUX0 517 aa5.56□□□□□ -1.52
SCMH1-208ENST00000397171 ROMO1P60602 79 aa5.56□□□□□ -1.52
SCMH1-208ENST00000397171 HYDINQ4G0P3 5121 aa5.56□□□□□ -1.52
SCMH1-208ENST00000397171 SPINK1P00995 79 aa5.55□□□□□ -1.52
SCMH1-208ENST00000397171 H0YAA0 97 aa5.54□□□□□ -1.52
SCMH1-208ENST00000397171 DNAH5Q8TE73 4624 aa5.54□□□□□ -1.52
SCMH1-208ENST00000397171 LINC00304Q8N9R0 145 aa5.54□□□□□ -1.52
SCMH1-208ENST00000397171 LRP1BQ9NZR2 4599 aa5.53□□□□□ -1.52
SCMH1-208ENST00000397171 Q6ZSA8 131 aa5.53□□□□□ -1.52
SCMH1-208ENST00000397171 RYR3Q15413 4870 aa5.52□□□□□ -1.53
SCMH1-208ENST00000397171 SSBP3-AS1Q7Z2R9 100 aa5.52□□□□□ -1.53
SCMH1-208ENST00000397171 SACSQ9NZJ4 4579 aa5.51□□□□□ -1.53
SCMH1-208ENST00000397171 Q8N1X5 172 aa5.49□□□□□ -1.53
SCMH1-208ENST00000397171 KRTAP10-1P60331 282 aa5.47□□□□□ -1.53
SCMH1-208ENST00000397171 PKHD1P08F94 4074 aa5.46□□□□□ -1.53
SCMH1-208ENST00000397171 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
SCMH1-208ENST00000397171 FAT2Q9NYQ8 4349 aa5.45□□□□□ -1.54
SCMH1-208ENST00000397171 RYR2Q92736 4967 aa5.45□□□□□ -1.54
SCMH1-208ENST00000397171 VPS13BQ7Z7G8 4022 aa5.45□□□□□ -1.54
SCMH1-208ENST00000397171 PKD1P98161 4303 aa5.44□□□□□ -1.54
SCMH1-208ENST00000397171 P0C880 135 aa5.44□□□□□ -1.54
SCMH1-208ENST00000397171 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
SCMH1-208ENST00000397171 CRIPTQ9P021 101 aa5.43□□□□□ -1.54
SCMH1-208ENST00000397171 A0A1B0GU33 70 aa5.43□□□□□ -1.54
SCMH1-208ENST00000397171 FLG2Q5D862 2391 aaPredicted RBP5.43□□□□□ -1.54
SCMH1-208ENST00000397171 H1FX-AS1Q4G0G2 97 aa5.41□□□□□ -1.54
SCMH1-208ENST00000397171 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
SCMH1-208ENST00000397171 SMR3BP02814 79 aaPredicted RBP5.35□□□□□ -1.55
SCMH1-208ENST00000397171 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
SCMH1-208ENST00000397171 FAT1Q14517 4588 aa5.35□□□□□ -1.55
SCMH1-208ENST00000397171 KRTAP1-4P0C5Y4 121 aa5.32□□□□□ -1.56
SCMH1-208ENST00000397171 K7ERS5 55 aa5.32□□□□□ -1.56
SCMH1-208ENST00000397171 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
SCMH1-208ENST00000397171 COX6B2Q6YFQ2 88 aa5.29□□□□□ -1.56
SCMH1-208ENST00000397171 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
SCMH1-208ENST00000397171 SPINT4Q6UDR6 99 aa5.26□□□□□ -1.57
SCMH1-208ENST00000397171 A0A1B0GVY2 172 aa5.25□□□□□ -1.57
SCMH1-208ENST00000397171 TPRXLQ17RH7 258 aa5.25□□□□□ -1.57
SCMH1-208ENST00000397171 KIAA1109Q2LD37 5005 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms