RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 KRTAP4-1Q9BYQ7 146 aa7.63□□□□□ -1.19
SEC13-205ENST00000397101 UBL5Q9BZL1 73 aa7.63□□□□□ -1.19
SEC13-205ENST00000397101 LINC00846Q9NV44 126 aa7.61□□□□□ -1.19
SEC13-205ENST00000397101 DEFB116Q30KQ4 102 aa7.6□□□□□ -1.19
SEC13-205ENST00000397101 K7ERU9 68 aa7.59□□□□□ -1.19
SEC13-205ENST00000397101 C1orf195Q5TG92 126 aa7.59□□□□□ -1.19
SEC13-205ENST00000397101 Q6ZVQ6 151 aa7.59□□□□□ -1.19
SEC13-205ENST00000397101 SIGMAR1Q99720 223 aa7.59□□□□□ -1.19
SEC13-205ENST00000397101 FAM240AA0A1B0GVK7 77 aa7.58□□□□□ -1.2
SEC13-205ENST00000397101 IGKV4-1P06312 121 aa7.58□□□□□ -1.2
SEC13-205ENST00000397101 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
SEC13-205ENST00000397101 J3KT08 172 aa7.55□□□□□ -1.2
SEC13-205ENST00000397101 BPY2O14599 106 aa7.55□□□□□ -1.2
SEC13-205ENST00000397101 LINC00472Q9H8W2 130 aa7.55□□□□□ -1.2
SEC13-205ENST00000397101 Q96NJ1 140 aa7.54□□□□□ -1.2
SEC13-205ENST00000397101 NDUFB1O75438 58 aa7.52□□□□□ -1.21
SEC13-205ENST00000397101 XP32Q5T750 250 aa7.52□□□□□ -1.21
SEC13-205ENST00000397101 KRTAP19-2Q3LHN2 52 aa7.51□□□□□ -1.21
SEC13-205ENST00000397101 MT1HP80294 61 aa7.5□□□□□ -1.21
SEC13-205ENST00000397101 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
SEC13-205ENST00000397101 IGKV3D-7A0A0C4DH55 119 aa7.48□□□□□ -1.21
SEC13-205ENST00000397101 A8MWP4 228 aa7.47□□□□□ -1.21
SEC13-205ENST00000397101 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
SEC13-205ENST00000397101 LINC00643Q86TS7 51 aa7.47□□□□□ -1.21
SEC13-205ENST00000397101 A0A1B0GVX0 72 aa7.45□□□□□ -1.22
SEC13-205ENST00000397101 C9orf92A6NGG3 77 aa7.45□□□□□ -1.22
SEC13-205ENST00000397101 DSCR10P59022 87 aa7.45□□□□□ -1.22
SEC13-205ENST00000397101 ATP5EP2Q5VTU8 51 aa7.45□□□□□ -1.22
SEC13-205ENST00000397101 CXCL6P80162 114 aa7.44□□□□□ -1.22
SEC13-205ENST00000397101 K7EQZ3 153 aa7.43□□□□□ -1.22
SEC13-205ENST00000397101 Q8N9L7 120 aa7.43□□□□□ -1.22
SEC13-205ENST00000397101 FLGP20930 4061 aaPredicted RBP7.42□□□□□ -1.22
SEC13-205ENST00000397101 LINC00313P59037 77 aa7.42□□□□□ -1.22
SEC13-205ENST00000397101 KRTAP10-6P60371 365 aaPredicted RBP7.42□□□□□ -1.22
SEC13-205ENST00000397101 PRR15Q8IV56 129 aa7.42□□□□□ -1.22
SEC13-205ENST00000397101 C8orf87E5RJ46 101 aa7.41□□□□□ -1.22
SEC13-205ENST00000397101 HIST1H4AP62805 103 aaKnown RBP7.41□□□□□ -1.22
SEC13-205ENST00000397101 C8orf17Q9NRJ1 99 aa7.39□□□□□ -1.23
SEC13-205ENST00000397101 KRTAP9-7A8MTY7 169 aa7.36□□□□□ -1.23
SEC13-205ENST00000397101 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
SEC13-205ENST00000397101 WFDC13Q8IUB5 93 aa7.35□□□□□ -1.23
SEC13-205ENST00000397101 PCOTHQ58A44 107 aa7.34□□□□□ -1.23
SEC13-205ENST00000397101 MMP24-AS1A0A0U1RRL7 71 aa7.33□□□□□ -1.24
SEC13-205ENST00000397101 hDV103S1A0JD37 113 aa7.33□□□□□ -1.24
SEC13-205ENST00000397101 HCG22E2RYF7 251 aa7.33□□□□□ -1.24
SEC13-205ENST00000397101 MT-ATP8P03928 68 aa7.33□□□□□ -1.24
SEC13-205ENST00000397101 CASC2Q6XLA1 102 aa7.33□□□□□ -1.24
SEC13-205ENST00000397101 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.32□□□□□ -1.24
SEC13-205ENST00000397101 A0A087WVE0 104 aa7.3□□□□□ -1.24
SEC13-205ENST00000397101 NDUFS5O43920 106 aa7.3□□□□□ -1.24
SEC13-205ENST00000397101 TMEM254Q8TBM7 123 aa7.3□□□□□ -1.24
SEC13-205ENST00000397101 MRPL34Q9BQ48 92 aaKnown RBP7.29□□□□□ -1.24
SEC13-205ENST00000397101 M0R2T5 61 aa7.28□□□□□ -1.24
SEC13-205ENST00000397101 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
SEC13-205ENST00000397101 IMUPQ9GZP8 106 aa7.26□□□□□ -1.25
SEC13-205ENST00000397101 SSPOA2VEC9 5147 aa7.25□□□□□ -1.25
SEC13-205ENST00000397101 USH2AO75445 5202 aa7.23□□□□□ -1.25
SEC13-205ENST00000397101 RPL37P61927 97 aaKnown RBP7.23□□□□□ -1.25
SEC13-205ENST00000397101 ATP11AUNQ6ZP68 121 aa7.23□□□□□ -1.25
SEC13-205ENST00000397101 Q75L30 129 aa7.23□□□□□ -1.25
SEC13-205ENST00000397101 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
SEC13-205ENST00000397101 A8MUU9 505 aa7.22□□□□□ -1.25
SEC13-205ENST00000397101 SCGB1A1P11684 91 aa7.22□□□□□ -1.25
SEC13-205ENST00000397101 Q8N9P0 234 aaPredicted RBP7.21□□□□□ -1.26
SEC13-205ENST00000397101 COX6B2Q6YFQ2 88 aa7.2□□□□□ -1.26
SEC13-205ENST00000397101 FAM236AA0A1B0GUQ0 79 aa7.17□□□□□ -1.26
SEC13-205ENST00000397101 FAM236BA0A1B0GV22 79 aa7.17□□□□□ -1.26
SEC13-205ENST00000397101 TP53AIP1Q9HCN2 124 aa7.16□□□□□ -1.26
SEC13-205ENST00000397101 ZCCHC13Q8WW36 166 aaKnown RBP7.15□□□□□ -1.26
SEC13-205ENST00000397101 FCGBPQ9Y6R7 5405 aaPredicted RBP7.12□□□□□ -1.27
SEC13-205ENST00000397101 UQCRQO14949 82 aa7.1□□□□□ -1.27
SEC13-205ENST00000397101 ATOX1O00244 68 aa7.08□□□□□ -1.28
SEC13-205ENST00000397101 Q5W150 140 aa7.07□□□□□ -1.28
SEC13-205ENST00000397101 SMIM20Q8N5G0 67 aa7.07□□□□□ -1.28
SEC13-205ENST00000397101 OCR1Q9BZK8 76 aa7.06□□□□□ -1.28
SEC13-205ENST00000397101 TRAV22A0A0B4J277 110 aa7.05□□□□□ -1.28
SEC13-205ENST00000397101 KRTAP9-8Q9BYQ0 159 aa7.05□□□□□ -1.28
SEC13-205ENST00000397101 H0Y9P7 68 aa7.04□□□□□ -1.28
SEC13-205ENST00000397101 IGKV2D-30A0A075B6S6 120 aa7.03□□□□□ -1.28
SEC13-205ENST00000397101 TRAV7A0A075B6U4 112 aa7.03□□□□□ -1.28
SEC13-205ENST00000397101 IGKV2-30P06310 120 aa7.03□□□□□ -1.28
SEC13-205ENST00000397101 MP68P56378 58 aa7.03□□□□□ -1.28
SEC13-205ENST00000397101 C5orf47Q569G3 176 aa7.01□□□□□ -1.29
SEC13-205ENST00000397101 SPINK7P58062 85 aa7□□□□□ -1.29
SEC13-205ENST00000397101 MACF1Q9UPN3 7388 aaKnown RBP6.99□□□□□ -1.29
SEC13-205ENST00000397101 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
SEC13-205ENST00000397101 LINC00208Q96KT6 92 aa6.98□□□□□ -1.29
SEC13-205ENST00000397101 SERP2Q8N6R1 65 aa6.97□□□□□ -1.29
SEC13-205ENST00000397101 C1orf64Q8NEQ6 169 aa6.97□□□□□ -1.29
SEC13-205ENST00000397101 LOC101927531A0A1B0GV80 90 aa6.96□□□□□ -1.3
SEC13-205ENST00000397101 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
SEC13-205ENST00000397101 ANAPC13Q9BS18 74 aa6.95□□□□□ -1.3
SEC13-205ENST00000397101 SYNE2Q8WXH0 6885 aaKnown RBP6.94□□□□□ -1.3
SEC13-205ENST00000397101 H3BPC8 53 aa6.94□□□□□ -1.3
SEC13-205ENST00000397101 CYP4F30PQ9H0H9 118 aa6.91□□□□□ -1.3
SEC13-205ENST00000397101 COX7CP15954 63 aa6.89□□□□□ -1.31
SEC13-205ENST00000397101 C20orf197Q8N268 126 aa6.89□□□□□ -1.31
SEC13-205ENST00000397101 RBM12B-AS1Q9P1G2 102 aa6.89□□□□□ -1.31
SEC13-205ENST00000397101 LCE2BO14633 110 aa6.88□□□□□ -1.31
SEC13-205ENST00000397101 FAM236DA0A1B0GTK5 79 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms