RNA–Protein interactions for RNA: ENST00000397085.3

RAPGEF4-202, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-202ENST00000397085 LINC00474Q9P2X8 69 aa2.02□□□□□ -2.09
RAPGEF4-202ENST00000397085 UQCR10Q9UDW1 63 aa2.02□□□□□ -2.09
RAPGEF4-202ENST00000397085 VPS13BQ7Z7G8 4022 aa2.01□□□□□ -2.09
RAPGEF4-202ENST00000397085 TRAV13-2A0A0B4J235 113 aa2.01□□□□□ -2.09
RAPGEF4-202ENST00000397085 TRBV6-1A0A0K0K1D8 114 aa2.01□□□□□ -2.09
RAPGEF4-202ENST00000397085 ZNF56Q15929 161 aa2.01□□□□□ -2.09
RAPGEF4-202ENST00000397085 C1orf137Q5JT78 98 aa2.01□□□□□ -2.09
RAPGEF4-202ENST00000397085 ALKAL2Q6UX46 152 aa2.01□□□□□ -2.09
RAPGEF4-202ENST00000397085 SPTSSBQ8NFR3 76 aa2.01□□□□□ -2.09
RAPGEF4-202ENST00000397085 SPACA4Q8TDM5 124 aa2.01□□□□□ -2.09
RAPGEF4-202ENST00000397085 C22orf24Q9Y442 160 aa2.01□□□□□ -2.09
RAPGEF4-202ENST00000397085 HCG22E2RYF7 251 aa2□□□□□ -2.09
RAPGEF4-202ENST00000397085 SEC11AP67812 179 aa2□□□□□ -2.09
RAPGEF4-202ENST00000397085 LINC01600Q96MT4 127 aa2□□□□□ -2.09
RAPGEF4-202ENST00000397085 CYP4F30PQ9H0H9 118 aa2□□□□□ -2.09
RAPGEF4-202ENST00000397085 CDC42SE1Q9NRR8 79 aa2□□□□□ -2.09
RAPGEF4-202ENST00000397085 PLAC8Q9NZF1 115 aa2□□□□□ -2.09
RAPGEF4-202ENST00000397085 HMCN2Q8NDA2 5059 aa2□□□□□ -2.09
RAPGEF4-202ENST00000397085 LRP1Q07954 4544 aaKnown RBP1.99□□□□□ -2.09
RAPGEF4-202ENST00000397085 DNAH8Q96JB1 4490 aa1.99□□□□□ -2.09
RAPGEF4-202ENST00000397085 TRBV25-1A0A075B6N4 114 aa1.99□□□□□ -2.09
RAPGEF4-202ENST00000397085 M0QY20 66 aa1.99□□□□□ -2.09
RAPGEF4-202ENST00000397085 SERP2Q8N6R1 65 aa1.99□□□□□ -2.09
RAPGEF4-202ENST00000397085 FAM213BQ8TBF2 198 aa1.99□□□□□ -2.09
RAPGEF4-202ENST00000397085 TIMM21Q9BVV7 248 aa1.99□□□□□ -2.09
RAPGEF4-202ENST00000397085 UBR4Q5T4S7 5183 aa1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 FXYD6-FXYD2A0A087WZ82 144 aa1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 A0A096LNI7 61 aa1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 GVQW2A0A096LPI5 108 aaPredicted RBP1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 NDUFC1O43677 76 aa1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 APOC3P02656 99 aa1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 MGPP08493 103 aa1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 COX6A2Q02221 97 aa1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 TPRXLQ17RH7 258 aa1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 BAGE2Q86Y30 109 aa1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 LINC00304Q8N9R0 145 aa1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 ORMDL1Q9P0S3 153 aa1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 SRRM2Q9UQ35 2752 aaKnown RBP1.98□□□□□ -2.09
RAPGEF4-202ENST00000397085 IGKV2-24A0A0C4DH68 120 aa1.97□□□□□ -2.09
RAPGEF4-202ENST00000397085 A0A0G2JQZ4 141 aa1.97□□□□□ -2.09
RAPGEF4-202ENST00000397085 SYS1-DBNDD2H3BUS1 97 aa1.97□□□□□ -2.09
RAPGEF4-202ENST00000397085 ADIRFQ15847 76 aa1.97□□□□□ -2.09
RAPGEF4-202ENST00000397085 CSAG1Q6PB30 78 aa1.97□□□□□ -2.09
RAPGEF4-202ENST00000397085 SPINK6Q6UWN8 80 aa1.97□□□□□ -2.09
RAPGEF4-202ENST00000397085 IFI27L1Q96BM0 104 aa1.97□□□□□ -2.09
RAPGEF4-202ENST00000397085 ST20Q9HBF5 79 aa1.97□□□□□ -2.09
RAPGEF4-202ENST00000397085 SMCO4Q9NRQ5 59 aa1.97□□□□□ -2.09
RAPGEF4-202ENST00000397085 SPCS1Q9Y6A9 102 aa1.97□□□□□ -2.09
RAPGEF4-202ENST00000397085 FAT3Q8TDW7 4589 aa1.97□□□□□ -2.09
RAPGEF4-202ENST00000397085 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.96□□□□□ -2.1
RAPGEF4-202ENST00000397085 IGKV3OR2-268A0A0C4DH90 116 aa1.96□□□□□ -2.1
RAPGEF4-202ENST00000397085 IGKV2-29A2NJV5 120 aaPredicted RBP1.96□□□□□ -2.1
RAPGEF4-202ENST00000397085 H3BRM9 83 aa1.96□□□□□ -2.1
RAPGEF4-202ENST00000397085 KRTAP13-1Q8IUC0 172 aa1.96□□□□□ -2.1
RAPGEF4-202ENST00000397085 DMAC1Q96GE9 116 aa1.96□□□□□ -2.1
RAPGEF4-202ENST00000397085 CNFNQ9BYD5 112 aa1.96□□□□□ -2.1
RAPGEF4-202ENST00000397085 CYSTM1Q9H1C7 97 aa1.96□□□□□ -2.1
RAPGEF4-202ENST00000397085 TRAV23DV6A0A075B6W5 121 aa1.95□□□□□ -2.1
RAPGEF4-202ENST00000397085 UMAD1C9J7I0 102 aa1.95□□□□□ -2.1
RAPGEF4-202ENST00000397085 F2Z2F3 143 aa1.95□□□□□ -2.1
RAPGEF4-202ENST00000397085 UBE2D1P51668 147 aa1.95□□□□□ -2.1
RAPGEF4-202ENST00000397085 RPL39LQ96EH5 51 aaKnown RBP1.95□□□□□ -2.1
RAPGEF4-202ENST00000397085 KRTAP4-1Q9BYQ7 146 aa1.95□□□□□ -2.1
RAPGEF4-202ENST00000397085 PKHD1L1Q86WI1 4243 aa1.95□□□□□ -2.1
RAPGEF4-202ENST00000397085 LINC00959A0A1B0GUT2 108 aa1.94□□□□□ -2.1
RAPGEF4-202ENST00000397085 A0A1W2PNN7 141 aa1.94□□□□□ -2.1
RAPGEF4-202ENST00000397085 A0A1W2PPM0 123 aa1.94□□□□□ -2.1
RAPGEF4-202ENST00000397085 SDHAF1A6NFY7 115 aa1.94□□□□□ -2.1
RAPGEF4-202ENST00000397085 IGLV6-57P01721 117 aa1.94□□□□□ -2.1
RAPGEF4-202ENST00000397085 ETDBQ3ZM63 59 aa1.94□□□□□ -2.1
RAPGEF4-202ENST00000397085 LIMD2Q9BT23 127 aa1.94□□□□□ -2.1
RAPGEF4-202ENST00000397085 NXT2Q9NPJ8 142 aaKnown RBP1.94□□□□□ -2.1
RAPGEF4-202ENST00000397085 MANBALQ9NQG1 85 aa1.94□□□□□ -2.1
RAPGEF4-202ENST00000397085 GNG13Q9P2W3 67 aa1.94□□□□□ -2.1
RAPGEF4-202ENST00000397085 TNXBP22105 4242 aa1.93□□□□□ -2.1
RAPGEF4-202ENST00000397085 TRBV6-5A0A0K0K1A5 114 aa1.93□□□□□ -2.1
RAPGEF4-202ENST00000397085 H7BZZ5 65 aa1.93□□□□□ -2.1
RAPGEF4-202ENST00000397085 IGLC3P0DOY3 106 aa1.93□□□□□ -2.1
RAPGEF4-202ENST00000397085 CDC42SE2Q9NRR3 84 aa1.93□□□□□ -2.1
RAPGEF4-202ENST00000397085 TEX49A0A1B0GTD5 131 aa1.92□□□□□ -2.1
RAPGEF4-202ENST00000397085 KANTRA0A1W2PQU2 76 aa1.92□□□□□ -2.1
RAPGEF4-202ENST00000397085 C7orf77A4D0Y5 90 aa1.92□□□□□ -2.1
RAPGEF4-202ENST00000397085 I3L3M4 83 aa1.92□□□□□ -2.1
RAPGEF4-202ENST00000397085 POLR2KP53803 58 aaKnown RBP1.92□□□□□ -2.1
RAPGEF4-202ENST00000397085 BVES-AS1Q5T3Y7 98 aa1.92□□□□□ -2.1
RAPGEF4-202ENST00000397085 PRO1854Q9UHT4 67 aa1.92□□□□□ -2.1
RAPGEF4-202ENST00000397085 UBE2D4Q9Y2X8 147 aa1.92□□□□□ -2.1
RAPGEF4-202ENST00000397085 LRP2P98164 4655 aa1.92□□□□□ -2.1
RAPGEF4-202ENST00000397085 TRAV22A0A0B4J277 110 aa1.91□□□□□ -2.1
RAPGEF4-202ENST00000397085 SPAG11BQ08648 103 aa1.91□□□□□ -2.1
RAPGEF4-202ENST00000397085 KLKP1Q107X0 134 aa1.91□□□□□ -2.1
RAPGEF4-202ENST00000397085 Q5VV11 94 aa1.91□□□□□ -2.1
RAPGEF4-202ENST00000397085 HIGD1BQ9P298 99 aa1.91□□□□□ -2.1
RAPGEF4-202ENST00000397085 HIGD1CA8MV81 97 aa1.9□□□□□ -2.11
RAPGEF4-202ENST00000397085 BCE1O60756 84 aa1.9□□□□□ -2.11
RAPGEF4-202ENST00000397085 COX6CP09669 75 aa1.9□□□□□ -2.11
RAPGEF4-202ENST00000397085 PDE6GP18545 87 aa1.9□□□□□ -2.11
RAPGEF4-202ENST00000397085 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
RAPGEF4-202ENST00000397085 C6orf48Q9UBA6 75 aa1.9□□□□□ -2.11
RAPGEF4-202ENST00000397085 A0A1B0GUT8 65 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms