RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 FAM236CP0DP71 79 aa9.16□□□□□ -0.94
FXN-203ENST00000396366 MPLKIPQ8TAP9 179 aa9.16□□□□□ -0.94
FXN-203ENST00000396366 NAA38Q9BRA0 125 aaKnown RBP9.16□□□□□ -0.94
FXN-203ENST00000396366 C9JAW5 83 aa9.15□□□□□ -0.94
FXN-203ENST00000396366 C8orf87E5RJ46 101 aa9.13□□□□□ -0.95
FXN-203ENST00000396366 Q6ZQT0 140 aa9.13□□□□□ -0.95
FXN-203ENST00000396366 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
FXN-203ENST00000396366 SSPOA2VEC9 5147 aa9.1□□□□□ -0.95
FXN-203ENST00000396366 MT2AP02795 61 aa9.09□□□□□ -0.95
FXN-203ENST00000396366 J3KT08 172 aa9.08□□□□□ -0.96
FXN-203ENST00000396366 ATXN8Q156A1 80 aa9.07□□□□□ -0.96
FXN-203ENST00000396366 ZCCHC13Q8WW36 166 aaKnown RBP9.07□□□□□ -0.96
FXN-203ENST00000396366 M0R143 59 aa9.06□□□□□ -0.96
FXN-203ENST00000396366 C21orf62-AS1Q17RA5 79 aa9.04□□□□□ -0.96
FXN-203ENST00000396366 JMJD7-PLA2G4BH0Y9G9 81 aa9.03□□□□□ -0.96
FXN-203ENST00000396366 MT1FP04733 61 aa9.03□□□□□ -0.96
FXN-203ENST00000396366 LOC110117498A0A087WWA1 95 aa9.02□□□□□ -0.97
FXN-203ENST00000396366 SPINK7P58062 85 aa9.02□□□□□ -0.97
FXN-203ENST00000396366 NDUFB1O75438 58 aa9.01□□□□□ -0.97
FXN-203ENST00000396366 Q8N9P0 234 aaPredicted RBP9.01□□□□□ -0.97
FXN-203ENST00000396366 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
FXN-203ENST00000396366 IGKV3D-7A0A0C4DH55 119 aa9□□□□□ -0.97
FXN-203ENST00000396366 C8orf17Q9NRJ1 99 aa9□□□□□ -0.97
FXN-203ENST00000396366 A8MWP4 228 aa8.99□□□□□ -0.97
FXN-203ENST00000396366 KRTAP10-10P60014 251 aa8.96□□□□□ -0.98
FXN-203ENST00000396366 A0A1B0GW54 56 aa8.95□□□□□ -0.98
FXN-203ENST00000396366 LCE2BO14633 110 aa8.95□□□□□ -0.98
FXN-203ENST00000396366 PDE6GP18545 87 aa8.95□□□□□ -0.98
FXN-203ENST00000396366 LYRM7Q5U5X0 104 aa8.94□□□□□ -0.98
FXN-203ENST00000396366 MTURNQ8N3F0 131 aa8.94□□□□□ -0.98
FXN-203ENST00000396366 KRTAP9-3Q9BYQ3 159 aa8.94□□□□□ -0.98
FXN-203ENST00000396366 SMIM6P0DI80 62 aa8.93□□□□□ -0.98
FXN-203ENST00000396366 BATFQ16520 125 aa8.93□□□□□ -0.98
FXN-203ENST00000396366 Q6ZVQ6 151 aa8.92□□□□□ -0.98
FXN-203ENST00000396366 NREPQ16612 68 aa8.91□□□□□ -0.98
FXN-203ENST00000396366 PRR15Q8IV56 129 aa8.91□□□□□ -0.98
FXN-203ENST00000396366 WFDC13Q8IUB5 93 aa8.89□□□□□ -0.99
FXN-203ENST00000396366 MMP24-AS1A0A0U1RRL7 71 aa8.87□□□□□ -0.99
FXN-203ENST00000396366 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.87□□□□□ -0.99
FXN-203ENST00000396366 FCGBPQ9Y6R7 5405 aaPredicted RBP8.86□□□□□ -0.99
FXN-203ENST00000396366 TSTD3H0UI37 97 aa8.84□□□□□ -0.99
FXN-203ENST00000396366 K7EQZ3 153 aa8.83□□□□□ -1
FXN-203ENST00000396366 TMEM254Q8TBM7 123 aa8.83□□□□□ -1
FXN-203ENST00000396366 MRPL34Q9BQ48 92 aaKnown RBP8.83□□□□□ -1
FXN-203ENST00000396366 C9orf118A6NHY6 69 aa8.82□□□□□ -1
FXN-203ENST00000396366 KRTAP19-1Q8IUB9 90 aa8.82□□□□□ -1
FXN-203ENST00000396366 TAX1BP3O14907 124 aa8.81□□□□□ -1
FXN-203ENST00000396366 A0A1W2PPM0 123 aa8.79□□□□□ -1
FXN-203ENST00000396366 H3BT86 120 aa8.79□□□□□ -1
FXN-203ENST00000396366 hDV103S1A0JD37 113 aa8.78□□□□□ -1
FXN-203ENST00000396366 NDUFS5O43920 106 aa8.78□□□□□ -1
FXN-203ENST00000396366 KRTAP9-7A8MTY7 169 aa8.77□□□□□ -1.01
FXN-203ENST00000396366 LOC105371267A0A1B0GV96 52 aa8.75□□□□□ -1.01
FXN-203ENST00000396366 BPY2O14599 106 aa8.73□□□□□ -1.01
FXN-203ENST00000396366 Q5W150 140 aa8.73□□□□□ -1.01
FXN-203ENST00000396366 Q8N9L7 120 aa8.72□□□□□ -1.01
FXN-203ENST00000396366 IGKV2D-30A0A075B6S6 120 aa8.69□□□□□ -1.02
FXN-203ENST00000396366 IGKV2-30P06310 120 aa8.69□□□□□ -1.02
FXN-203ENST00000396366 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
FXN-203ENST00000396366 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
FXN-203ENST00000396366 SPCS1Q9Y6A9 102 aa8.66□□□□□ -1.02
FXN-203ENST00000396366 CASC2Q6XLA1 102 aa8.64□□□□□ -1.03
FXN-203ENST00000396366 HCG22E2RYF7 251 aa8.62□□□□□ -1.03
FXN-203ENST00000396366 C7orf65Q6ZTY9 151 aa8.61□□□□□ -1.03
FXN-203ENST00000396366 KRTAP19-6Q3LI70 58 aa8.59□□□□□ -1.03
FXN-203ENST00000396366 SYNE2Q8WXH0 6885 aaKnown RBP8.58□□□□□ -1.04
FXN-203ENST00000396366 MACF1Q9UPN3 7388 aaKnown RBP8.58□□□□□ -1.04
FXN-203ENST00000396366 C4orf26Q17RF5 130 aa8.57□□□□□ -1.04
FXN-203ENST00000396366 LINC00846Q9NV44 126 aa8.57□□□□□ -1.04
FXN-203ENST00000396366 PRO0461Q9UI25 63 aa8.56□□□□□ -1.04
FXN-203ENST00000396366 CXCL6P80162 114 aa8.52□□□□□ -1.05
FXN-203ENST00000396366 UBL5Q9BZL1 73 aa8.5□□□□□ -1.05
FXN-203ENST00000396366 K7EP34 96 aa8.49□□□□□ -1.05
FXN-203ENST00000396366 COL5A1-AS1Q5SY13 56 aa8.49□□□□□ -1.05
FXN-203ENST00000396366 KRTAP3-1Q9BYR8 98 aa8.47□□□□□ -1.05
FXN-203ENST00000396366 C5orf47Q569G3 176 aa8.44□□□□□ -1.06
FXN-203ENST00000396366 C1orf64Q8NEQ6 169 aa8.37□□□□□ -1.07
FXN-203ENST00000396366 S4R3F8 94 aa8.36□□□□□ -1.07
FXN-203ENST00000396366 FAM236AA0A1B0GUQ0 79 aa8.33□□□□□ -1.08
FXN-203ENST00000396366 FAM236BA0A1B0GV22 79 aa8.33□□□□□ -1.08
FXN-203ENST00000396366 LCA10Q71F78 164 aa8.33□□□□□ -1.08
FXN-203ENST00000396366 ETDBQ3ZM63 59 aa8.32□□□□□ -1.08
FXN-203ENST00000396366 TP53AIP1Q9HCN2 124 aa8.32□□□□□ -1.08
FXN-203ENST00000396366 GTF2H5Q6ZYL4 71 aa8.31□□□□□ -1.08
FXN-203ENST00000396366 F8W1H4 67 aa8.3□□□□□ -1.08
FXN-203ENST00000396366 CSAG1Q6PB30 78 aa8.3□□□□□ -1.08
FXN-203ENST00000396366 PCP4L1A6NKN8 68 aa8.26□□□□□ -1.09
FXN-203ENST00000396366 MT1BP07438 61 aa8.25□□□□□ -1.09
FXN-203ENST00000396366 KRTAP6-3Q3LI67 103 aa8.24□□□□□ -1.09
FXN-203ENST00000396366 CYP4F30PQ9H0H9 118 aa8.23□□□□□ -1.09
FXN-203ENST00000396366 A0A087WVE0 104 aa8.21□□□□□ -1.1
FXN-203ENST00000396366 SPRR2GQ9BYE4 73 aa8.21□□□□□ -1.1
FXN-203ENST00000396366 Q5VV11 94 aa8.19□□□□□ -1.1
FXN-203ENST00000396366 KRTAP19-8Q3LI54 63 aa8.18□□□□□ -1.1
FXN-203ENST00000396366 A6NN06 94 aa8.16□□□□□ -1.1
FXN-203ENST00000396366 TRAV22A0A0B4J277 110 aa8.14□□□□□ -1.11
FXN-203ENST00000396366 KLKP1Q107X0 134 aa8.14□□□□□ -1.11
FXN-203ENST00000396366 LOC101927531A0A1B0GV80 90 aa8.1□□□□□ -1.11
FXN-203ENST00000396366 ACYP1P07311 99 aa8.08□□□□□ -1.12
FXN-203ENST00000396366 HIST1H4AP62805 103 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms